C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001W4_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000127884-ENSG00000148832 CGP 9606 10:133362480-133391694
GeneTranscriptPositionBiotype
ENSG00000127884 (ECHS1)
enoyl CoA hydratase, short chain, 1, mitochondrial 		ENST00000368547 (ECHS1-001) 133362480-133373689 protein_coding
ENSG00000148832 (PAOX)
polyamine oxidase (exo-N4-amino) 		ENST00000278060 (PAOX-001) 133379234-133391694 protein_coding
ENST00000356306 (PAOX-002) 133379287-133391624 nonsense_mediated_decay
ENST00000357296 (PAOX-006) 133379261-133391654 protein_coding
ENST00000368535 (PAOX-005) 133379528-133391694 processed_transcript
ENST00000368539 (PAOX-201) 133380064-133391624 protein_coding
ENST00000476834 (PAOX-004) 133379287-133391624 nonsense_mediated_decay
ENST00000480071 (PAOX-008) 133379287-133391624 protein_coding
ENST00000483211 (PAOX-003) 133379287-133391624 nonsense_mediated_decay
ENST00000528127 (PAOX-013) 133379539-133380373 processed_transcript
ENST00000529585 (PAOX-007) 133379287-133391624 nonsense_mediated_decay
ENST00000530555 (PAOX-014) 133391058-133391663 processed_transcript
ENSG00000265395 (MIR3944)
microRNA 3944 		ENST00000581277 (MIR3944-201) 133371556-133371663 miRNA
ENSG00000274685 (RP11-122K13.15)
 ENST00000621752 (RP11-122K13.15-001) 133374736-133374869 lincRNA

Homo sapiens Ensembl (GRCh38)

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CIL_0001W4_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000025465-ENSMUSG00000025464 CGP 10090 7:140105710-140134334
GeneTranscriptPositionBiotype
ENSMUSG00000025464 (Paox)
polyamine oxidase (exo-N4-amino) 		ENSMUST00000026537 (Paox-001) 140125657-140134334 protein_coding
ENSMUST00000097967 (Paox-002) 140125708-140134334 protein_coding
ENSMUSG00000025465 (Echs1)
enoyl Coenzyme A hydratase, short chain, 1, mitochondrial 		ENSMUST00000026538 (Echs1-001) 140105710-140116476 protein_coding
ENSMUST00000125337 (Echs1-005) 140111740-140116407 processed_transcript
ENSMUST00000135842 (Echs1-006) 140106084-140113007 protein_coding
ENSMUST00000147643 (Echs1-003) 140108766-140116415 retained_intron
ENSMUST00000151505 (Echs1-002) 140108766-140116415 retained_intron
ENSMUST00000155647 (Echs1-004) 140105718-140116389 retained_intron

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001W4_0001ENSG00000127884ENST00000368547ENSG00000148832ENST00000278060ENST00000356306ENST00000357296ENST00000368535ENST00000368539ENST00000476834ENST00000480071ENST00000483211ENST00000528127ENST00000529585ENST00000530555ENSG00000265395ENST00000581277ENSG00000274685ENST00000621752CIL_0001W4_0002ENSMUSG00000025464ENSMUST00000026537ENSMUST00000097967ENSMUSG00000025465ENSMUST00000026538ENSMUST00000125337ENSMUST00000135842ENSMUST00000147643ENSMUST00000151505ENSMUST00000155647
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001W4_0001ENSG00000127884ENST00000368547ENSG00000148832ENST00000278060ENST00000356306ENST00000357296ENST00000368535ENST00000528127ENST00000530555ENSG00000265395ENST00000581277ENSG00000274685ENST00000621752CIL_0001W4_0002ENSMUSG00000025464ENSMUST00000026537ENSMUST00000097967ENSMUSG00000025465ENSMUST00000026538ENSMUST00000125337ENSMUST00000135842
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000127884 ENST00000368547 69.914±0.00 53.108±0.00 18.037±0.00 35.450±20.80 112.740±109.31 30.626±24.99 51.974±46.69 137.286±29.15 178.140±169.22 18.383±13.64 31.671±18.56 63.233±32.74 79.477±12.84 59.663±8.86
ENSG00000148832 ENST00000278060 2.934±0.00 N/A N/A 4.846±0.00 5.459±0.00 1.591±0.62 N/A N/A 7.903±0.00 3.727±0.00 2.021±0.00 N/A 1.881±0.00 15.130±0.00
ENST00000356306 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 28.437±12.26
ENST00000357296 N/A N/A N/A N/A 0.678±0.00 N/A N/A 2.242±0.00 N/A N/A N/A N/A N/A N/A
ENST00000368535 N/A 5.945±0.00 N/A N/A N/A N/A 1.471±0.00 N/A N/A N/A N/A 6.503±0.00 N/A 18.164±8.62
ENST00000368539 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000476834 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480071 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483211 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000528127 N/A N/A N/A N/A N/A N/A 0.896±0.00 3.641±0.00 N/A N/A N/A N/A N/A N/A
ENST00000529585 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000530555 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.572±0.00 N/A N/A N/A
ENSG00000265395 ENST00000581277 N/A N/A N/A N/A N/A N/A N/A 0.457±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000274685 ENST00000621752 N/A N/A N/A 0.476±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.153±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025464 ENSMUST00000026537 8.885±1.85 13.449±0.50 4.649±0.60 1.382±0.86 10.265±2.19 6.036±0.66 0.910±0.25 4.402±0.70 5.127±2.31 4.031±0.31 0.737±0.26 11.298±1.44 1.524±1.14 0.947±0.42
ENSMUST00000097967 3.149±0.30 N/A N/A 0.720±0.00 4.264±0.00 N/A 0.874±0.19 1.447±0.25 9.894±5.32 N/A 1.195±0.51 4.021±0.85 0.857±0.24 0.281±0.18
ENSMUSG00000025465 ENSMUST00000026538 116.851±28.74 104.260±2.49 38.194±12.70 28.565±6.55 93.908±15.01 52.522±1.83 143.856±37.96 130.132±2.93 98.033±39.85 34.746±1.29 45.886±10.68 54.680±9.71 21.308±6.98 8.250±2.58
ENSMUST00000125337 N/A N/A N/A 52.036±0.00 N/A N/A N/A N/A N/A N/A N/A 72.262±36.56 N/A N/A
ENSMUST00000135842 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 37.434±10.74 8.561±1.86 2.686±0.00
ENSMUST00000147643 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151505 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155647 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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