C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001W5_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000077291-ENSDARG00000028889 CGP 7955 3:18127816-18139908
GeneTranscriptPositionBiotype
ENSDARG00000028889 (ndufb10)
NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 10 		ENSDART00000041842 (ndufb10-001) 18134076-18139908 protein_coding
ENSDARG00000077291 (rps2)
ribosomal protein S2 		ENSDART00000110842 (rps2-201) 18128255-18132116 protein_coding
ENSDART00000133878 (rps2-003) 18128257-18128783 retained_intron
ENSDART00000138107 (rps2-001) 18127816-18132119 protein_coding
ENSDART00000141100 (rps2-002) 18127816-18129633 protein_coding
CIL_0001W5_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000044533-ENSMUSG00000040048 CGP 10090 17:24718116-24724478
GeneTranscriptPositionBiotype
ENSMUSG00000040048 (Ndufb10)
NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 10 		ENSMUST00000045602 (Ndufb10-001) 24722060-24724478 protein_coding
ENSMUST00000129451 (Ndufb10-005) 24722060-24724420 retained_intron
ENSMUST00000135708 (Ndufb10-003) 24722405-24724412 protein_coding
ENSMUST00000141324 (Ndufb10-006) 24722060-24722649 retained_intron
ENSMUST00000144285 (Ndufb10-004) 24722060-24722906 retained_intron
ENSMUST00000147648 (Ndufb10-002) 24722682-24724394 processed_transcript
ENSMUSG00000044533 (Rps2)
ribosomal protein S2 		ENSMUST00000054289 (Rps2-001) 24720110-24721929 protein_coding
ENSMUST00000122809 (Rps2-004) 24720273-24721332 retained_intron
ENSMUST00000129580 (Rps2-005) 24720823-24721867 retained_intron
ENSMUST00000129984 (Rps2-007) 24720262-24721307 retained_intron
ENSMUST00000132803 (Rps2-006) 24721449-24721925 retained_intron
ENSMUST00000146867 (Rps2-002) 24720251-24721925 protein_coding
ENSMUST00000152407 (Rps2-003) 24718116-24721720 protein_coding
ENSMUST00000170715 (Rps2-201) 24720063-24721926 protein_coding
ENSMUSG00000089255 (Snora78)
small nucleolar RNA, H/ACA box 7 		ENSMUST00000158630 (Snora78-201) 24719676-24719803 snoRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001W5_0001ENSDARG00000028889ENSDART00000041842ENSDARG00000077291ENSDART00000110842ENSDART00000133878ENSDART00000138107ENSDART00000141100CIL_0001W5_0002ENSMUSG00000040048ENSMUST00000045602ENSMUST00000129451ENSMUST00000135708ENSMUST00000141324ENSMUST00000144285ENSMUST00000147648ENSMUSG00000044533ENSMUST00000054289ENSMUST00000122809ENSMUST00000129580ENSMUST00000129984ENSMUST00000132803ENSMUST00000146867ENSMUST00000152407ENSMUST00000170715ENSMUSG00000089255ENSMUST00000158630
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001W5_0001ENSDARG00000028889ENSDART00000041842ENSDARG00000077291ENSDART00000110842ENSDART00000133878ENSDART00000138107CIL_0001W5_0002ENSMUSG00000040048ENSMUST00000045602ENSMUST00000129451ENSMUST00000135708ENSMUST00000144285ENSMUSG00000044533ENSMUST00000054289ENSMUST00000129580ENSMUST00000132803ENSMUST00000146867ENSMUST00000152407ENSMUST00000170715ENSMUSG00000089255ENSMUST00000158630
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000028889 ENSDART00000041842 N/A N/A N/A 31.951±30.65 N/A N/A 118.642±114.69 26.702±25.66 4.940±0.00 N/A 82.591±0.00 N/A N/A N/A
ENSDARG00000077291 ENSDART00000110842 N/A N/A N/A 234.794±175.17 N/A N/A 1413.461±1411.52 652.006±637.12 263.668±0.00 N/A 1433.210±0.00 N/A N/A N/A
ENSDART00000133878 N/A N/A N/A N/A N/A N/A N/A 9.413±4.39 N/A N/A N/A N/A N/A N/A
ENSDART00000138107 N/A N/A N/A 86.295±0.00 N/A N/A 743.682±410.72 382.614±0.00 1784.630±0.00 N/A 484.155±0.00 N/A N/A N/A
ENSDART00000141100 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000040048 ENSMUST00000045602 177.130±25.16 26.499±9.80 127.592±5.00 154.978±95.40 84.683±59.12 41.292±15.32 499.182±46.29 263.170±38.43 124.727±22.33 66.771±31.44 219.256±10.14 57.186±43.64 121.118±58.04 98.924±7.93
ENSMUST00000129451 N/A 121.838±15.86 N/A N/A 96.908±52.60 128.263±27.22 N/A 111.136±0.00 33.986±15.02 61.709±14.27 N/A 92.213±18.07 N/A N/A
ENSMUST00000135708 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 56.144±0.00 46.922±0.00 78.871±0.00
ENSMUST00000141324 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144285 N/A N/A N/A N/A 14.647±0.00 N/A N/A N/A N/A N/A N/A 53.698±6.20 N/A 45.991±0.00
ENSMUST00000147648 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000044533 ENSMUST00000054289 N/A N/A N/A N/A N/A N/A N/A N/A 104.716±49.30 N/A N/A 85.592±24.32 129.298±69.38 N/A
ENSMUST00000122809 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000129580 N/A 246.636±39.38 N/A N/A 191.908±47.03 200.724±0.00 N/A N/A N/A N/A N/A 82.484±3.42 49.547±0.00 N/A
ENSMUST00000129984 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132803 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 500.978±67.17 94.274±0.00 N/A
ENSMUST00000146867 N/A 469.835±114.94 N/A N/A N/A 182.502±63.49 N/A 175.694±6.28 380.316±30.66 N/A N/A N/A N/A N/A
ENSMUST00000152407 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 35.623±5.49
ENSMUST00000170715 631.669±307.27 96.668±0.00 623.693±25.52 367.535±166.07 543.270±177.84 698.915±154.23 432.956±67.40 483.322±83.78 789.100±604.90 473.036±13.42 322.021±21.55 736.265±247.87 455.770±270.65 100.966±38.03
ENSMUSG00000089255 ENSMUST00000158630 1658.070±516.54 951.266±0.00 N/A 5.163±0.00 N/A N/A 1268.990±0.00 943.113±15.72 174.505±234.03 N/A 4.437±1.37 3259.985±1863.85 19.448±13.99 1003.227±44.40

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