C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0001X2_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000120656-ENSG00000120656 CGP 9606 1:28589323-28643085
GeneTranscriptPositionBiotype
ENSG00000120656 (TAF12)
TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 20kDa
ENST00000263974 (TAF12-001) 28603101-28643005 protein_coding
ENST00000373824 (TAF12-002) 28602850-28643066 protein_coding
ENST00000471683 (TAF12-003) 28589323-28618030 processed_transcript
ENST00000495422 (TAF12-004) 28613247-28643085 processed_transcript
ENSG00000188060 (RAB42)
RAB42, member RAS oncogene family
ENST00000373826 (RAB42-001) 28592200-28595443 protein_coding
ENST00000465518 (RAB42-002) 28592515-28594300 processed_transcript
CIL_0001X2_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000028899-ENSMUSG00000089687 CGP 10090 4:132274375-132303385
GeneTranscriptPositionBiotype
ENSMUSG00000028899 (Taf12)
TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor
ENSMUST00000030731 (Taf12-001) 132274375-132295766 protein_coding
ENSMUST00000105963 (Taf12-003) 132274416-132292712 protein_coding
ENSMUST00000124365 (Taf12-002) 132274413-132276788 processed_transcript
ENSMUSG00000089687 (Rab42)
RAB42, member RAS oncogene family
ENSMUST00000040411 (Rab42-001) 132302197-132303385 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001X2_0001ENSG00000120656ENST00000263974ENST00000373824ENST00000471683ENST00000495422ENSG00000188060ENST00000373826ENST00000465518CIL_0001X2_0002ENSMUSG00000028899ENSMUST00000030731ENSMUST00000105963ENSMUST00000124365ENSMUSG00000089687ENSMUST00000040411
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001X2_0001ENSG00000120656ENST00000263974ENST00000373824ENST00000471683ENST00000495422ENSG00000188060ENST00000373826ENST00000465518CIL_0001X2_0002ENSMUSG00000028899ENSMUST00000030731ENSMUST00000105963ENSMUSG00000089687ENSMUST00000040411
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000120656 ENST00000263974 6.194±0.00 4.885±0.00 N/A 1.421±1.10 7.974±0.00 8.862±0.00 6.393±0.00 8.892±0.00 4.933±0.00 5.573±0.00 10.218±0.00 7.640±2.60 6.937±1.09 14.734±0.00
ENST00000373824 5.855±0.00 2.714±0.00 1.746±0.00 2.498±0.22 2.545±0.16 1.974±0.38 0.778±0.00 3.019±0.00 1.642±0.55 2.178±1.21 N/A 5.394±2.41 8.631±6.57 7.842±2.58
ENST00000471683 N/A N/A N/A N/A N/A N/A N/A 3.881±0.00 N/A N/A N/A N/A N/A N/A
ENST00000495422 N/A N/A N/A 1.621±0.00 N/A 4.268±0.00 2.903±0.85 N/A N/A 2.364±0.00 N/A N/A 17.504±0.00 N/A
ENSG00000188060 ENST00000373826 N/A 1.173±0.00 N/A 0.214±0.17 N/A 0.204±0.00 0.144±0.00 0.297±0.00 N/A 0.486±0.00 0.090±0.04 N/A 0.470±0.05 0.345±0.00
ENST00000465518 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.405±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000028899 ENSMUST00000030731 2.608±0.28 0.690±0.20 2.796±0.31 2.586±0.52 1.665±0.31 1.598±0.44 1.429±0.20 2.631±0.26 3.638±2.81 1.890±0.26 1.687±0.20 2.031±0.86 3.294±0.65 2.091±0.80
ENSMUST00000105963 4.462±1.44 1.700±0.51 5.577±0.69 5.939±0.48 3.077±0.59 3.481±0.76 6.764±0.46 5.172±0.50 6.602±6.69 4.089±0.81 6.002±2.16 4.865±4.23 14.999±6.50 10.639±5.32
ENSMUST00000124365 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000089687 ENSMUST00000040411 1.346±0.46 1.500±0.42 1.041±0.00 0.249±0.07 1.463±0.86 1.648±0.39 1.536±0.26 3.327±0.76 0.211±0.15 0.939±0.21 0.365±0.09 1.747±0.81 0.565±0.12 11.758±3.15

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