C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0001Y3_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000074691-ENSDARG00000076262 CGP 7955 16:34595902-34877562
GeneTranscriptPositionBiotype
ENSDARG00000074691 (mms22l)
MMS22-like, DNA repair protein
ENSDART00000110263 (mms22l-201) 34595905-34618270 protein_coding
ENSDART00000134381 (mms22l-001) 34595902-34619250 protein_coding
ENSDART00000136517 (mms22l-002) 34602266-34604206 retained_intron
ENSDART00000143859 (mms22l-003) 34618113-34619234 protein_coding
ENSDARG00000076262 (pou3f2b)
POU class 3 homeobox 2b
ENSDART00000093250 (pou3f2b-001) 34874291-34877562 protein_coding
ENSDARG00000097514 (si:ch211-209o12.2)
si:ch211-209o12.2
ENSDART00000154886 (si:ch211-209o12.2-001) 34619723-34678670 lincRNA
ENSDART00000155056 (si:ch211-209o12.2-002) 34619723-34628493 lincRNA

Danio rerio Ensembl (Zv9)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_0001Y3_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000146263-ENSG00000184486 CGP 9606 6:97142161-98839490
GeneTranscriptPositionBiotype
ENSG00000146263 (MMS22L)
MMS22-like, DNA repair protein
ENST00000275053 (MMS22L-001) 97142161-97283176 protein_coding
ENST00000369251 (MMS22L-010) 97146545-97282553 protein_coding
ENST00000482634 (MMS22L-003) 97245979-97263352 protein_coding
ENST00000484170 (MMS22L-004) 97259663-97272795 processed_transcript
ENST00000496119 (MMS22L-002) 97267904-97283210 nonsense_mediated_decay
ENST00000506256 (MMS22L-011) 97259372-97272801 processed_transcript
ENST00000508820 (MMS22L-005) 97265720-97283217 retained_intron
ENST00000508976 (MMS22L-007) 97253465-97282511 retained_intron
ENST00000509383 (MMS22L-006) 97230269-97283188 nonsense_mediated_decay
ENST00000510018 (MMS22L-008) 97233861-97281304 protein_coding
ENST00000511335 (MMS22L-009) 97258663-97273105 retained_intron
ENST00000514790 (MMS22L-012) 97151578-97162045 retained_intron
ENSG00000184486 (POU3F2)
POU class 3 homeobox 2
ENST00000328345 (POU3F2-001) 98834592-98839490 protein_coding
ENSG00000187472 (RP11-67P15.1)
ENST00000340697 (RP11-67P15.1-001) 98780257-98793992 processed_pseudogene
ENSG00000220505 (EIF4EBP2P3)
eukaryotic translation initiation factor 4E binding protein 2 pseudogene 3
ENST00000403144 (EIF4EBP2P3-001) 98179499-98179832 processed_pseudogene
ENSG00000224849 (RP1-104O17.1)
ENST00000433637 (RP1-104O17.1-001) 97702281-97708103 lincRNA
ENSG00000226207 (RP1-104O17.3)
ENST00000432438 (RP1-104O17.3-001) 97710953-97717197 lincRNA
ENSG00000226684 (RP3-418C23.2)
ENST00000457513 (RP3-418C23.2-001) 97283303-97306098 lincRNA
ENST00000574739 (RP3-418C23.2-003) 97305586-97310048 lincRNA
ENSG00000236920 (RP11-111D3.2)
ENST00000418652 (RP11-111D3.2-001) 98210020-98214683 lincRNA
ENSG00000271860 (RP11-436D23.1)
ENST00000606913 (RP11-436D23.1-001) 97885501-98398863 lincRNA
ENST00000607032 (RP11-436D23.1-002) 97938789-98398771 lincRNA
ENST00000607823 (RP11-436D23.1-003) 97816709-98399872 lincRNA

Homo sapiens Ensembl (GRCh38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001Y3_0001ENSDARG00000074691ENSDART00000110263ENSDART00000134381ENSDART00000136517ENSDART00000143859ENSDARG00000076262ENSDART00000093250ENSDARG00000097514ENSDART00000154886ENSDART00000155056CIL_0001Y3_0002ENSG00000146263ENST00000275053ENST00000369251ENST00000482634ENST00000484170ENST00000496119ENST00000506256ENST00000508820ENST00000508976ENST00000509383ENST00000510018ENST00000511335ENST00000514790ENSG00000184486ENST00000328345ENSG00000187472ENST00000340697ENSG00000220505ENST00000403144ENSG00000224849ENST00000433637ENSG00000226207ENST00000432438ENSG00000226684ENST00000457513ENST00000574739ENSG00000236920ENST00000418652ENSG00000271860ENST00000606913ENST00000607032ENST00000607823
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001Y3_0001ENSDARG00000074691ENSDART00000110263ENSDART00000134381ENSDARG00000076262ENSDART00000093250ENSDARG00000097514ENSDART00000154886CIL_0001Y3_0002ENSG00000146263ENST00000275053ENST00000369251ENST00000496119ENST00000506256ENST00000508820ENST00000509383ENST00000511335ENSG00000184486ENST00000328345ENSG00000187472ENST00000340697ENSG00000220505ENST00000403144ENSG00000224849ENST00000433637ENSG00000226207ENST00000432438ENSG00000226684ENST00000457513ENST00000574739ENSG00000236920ENST00000418652ENSG00000271860ENST00000606913ENST00000607032ENST00000607823
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000074691 ENSDART00000110263 N/A N/A N/A 0.162±0.12 N/A N/A 0.333±0.19 0.281±0.00 N/A N/A 0.439±0.00 N/A N/A N/A
ENSDART00000134381 N/A N/A N/A N/A N/A N/A 0.324±0.00 1.682±0.00 0.123±0.00 N/A N/A N/A N/A N/A
ENSDART00000136517 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000143859 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000076262 ENSDART00000093250 N/A N/A N/A 8.794±5.98 N/A N/A 0.026±0.00 0.050±0.00 0.043±0.00 N/A 0.387±0.00 N/A N/A N/A
ENSDARG00000097514 ENSDART00000154886 N/A N/A N/A 0.199±0.03 N/A N/A 0.131±0.08 0.937±0.52 0.107±0.00 N/A N/A N/A N/A N/A
ENSDART00000155056 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000146263 ENST00000275053 0.103±0.00 0.439±0.00 N/A 0.307±0.00 N/A 0.234±0.00 0.062±0.00 N/A 0.276±0.25 0.105±0.00 N/A 0.295±0.14 0.371±0.26 0.807±0.41
ENST00000369251 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.086±0.00 0.025±0.00 1.308±0.00 N/A 2.053±0.54
ENST00000482634 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484170 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496119 N/A N/A N/A N/A N/A N/A N/A 0.724±0.00 N/A N/A N/A N/A N/A N/A
ENST00000506256 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.134±0.00 N/A N/A N/A
ENST00000508820 N/A N/A N/A N/A 0.322±0.00 0.391±0.00 N/A 0.101±0.00 N/A N/A N/A 0.498±0.00 N/A N/A
ENST00000508976 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509383 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.571±0.00 N/A N/A N/A N/A
ENST00000510018 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511335 0.094±0.00 0.223±0.00 0.117±0.00 0.079±0.02 0.116±0.00 N/A 0.055±0.00 0.084±0.00 0.023±0.00 0.209±0.00 0.010±0.01 0.147±0.09 0.069±0.00 N/A
ENST00000514790 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000184486 ENST00000328345 0.013±0.00 0.014±0.00 N/A 2.002±0.52 0.008±0.00 0.017±0.00 0.008±0.01 0.005±0.00 0.010±0.00 0.033±0.00 N/A 0.007±0.00 0.017±0.00 0.275±0.11
ENSG00000187472 ENST00000340697 0.049±0.00 0.157±0.00 N/A N/A 0.205±0.00 N/A N/A 0.051±0.00 N/A N/A N/A 0.595±0.00 N/A 0.136±0.00
ENSG00000220505 ENST00000403144 N/A N/A N/A 0.107±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000224849 ENST00000433637 N/A N/A N/A 0.353±0.00 N/A N/A N/A N/A 0.309±0.00 1.257±0.00 N/A N/A N/A 0.018±0.00
ENSG00000226207 ENST00000432438 N/A N/A N/A 0.187±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.053±0.00
ENSG00000226684 ENST00000457513 N/A N/A N/A 0.218±0.00 N/A N/A 0.048±0.00 N/A N/A N/A N/A 0.124±0.00 N/A 0.167±0.00
ENST00000574739 N/A N/A N/A 0.621±0.44 N/A N/A N/A N/A N/A 0.061±0.00 N/A N/A N/A N/A
ENSG00000236920 ENST00000418652 N/A N/A N/A 0.040±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000271860 ENST00000606913 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.028±0.00 0.059±0.00
ENST00000607032 N/A N/A N/A 0.485±0.00 0.011±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.048±0.00
ENST00000607823 N/A N/A N/A 0.179±0.11 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.031±0.00

Loading