C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001Y3_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000074691-ENSDARG00000076262 CGP 7955 16:34595902-34877562
GeneTranscriptPositionBiotype
ENSDARG00000074691 (mms22l)
MMS22-like, DNA repair protein 		ENSDART00000110263 (mms22l-201) 34595905-34618270 protein_coding
ENSDART00000134381 (mms22l-001) 34595902-34619250 protein_coding
ENSDART00000136517 (mms22l-002) 34602266-34604206 retained_intron
ENSDART00000143859 (mms22l-003) 34618113-34619234 protein_coding
ENSDARG00000076262 (pou3f2b)
POU class 3 homeobox 2b 		ENSDART00000093250 (pou3f2b-001) 34874291-34877562 protein_coding
ENSDARG00000097514 (si:ch211-209o12.2)
si:ch211-209o12.2 		ENSDART00000154886 (si:ch211-209o12.2-001) 34619723-34678670 lincRNA
ENSDART00000155056 (si:ch211-209o12.2-002) 34619723-34628493 lincRNA
CIL_0001Y3_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000146263-ENSG00000184486 CGP 9606 6:97142161-98839490
GeneTranscriptPositionBiotype
ENSG00000146263 (MMS22L)
MMS22-like, DNA repair protein 		ENST00000275053 (MMS22L-001) 97142161-97283176 protein_coding
ENST00000369251 (MMS22L-010) 97146545-97282553 protein_coding
ENST00000482634 (MMS22L-003) 97245979-97263352 protein_coding
ENST00000484170 (MMS22L-004) 97259663-97272795 processed_transcript
ENST00000496119 (MMS22L-002) 97267904-97283210 nonsense_mediated_decay
ENST00000506256 (MMS22L-011) 97259372-97272801 processed_transcript
ENST00000508820 (MMS22L-005) 97265720-97283217 retained_intron
ENST00000508976 (MMS22L-007) 97253465-97282511 retained_intron
ENST00000509383 (MMS22L-006) 97230269-97283188 nonsense_mediated_decay
ENST00000510018 (MMS22L-008) 97233861-97281304 protein_coding
ENST00000511335 (MMS22L-009) 97258663-97273105 retained_intron
ENST00000514790 (MMS22L-012) 97151578-97162045 retained_intron
ENSG00000184486 (POU3F2)
POU class 3 homeobox 2 		ENST00000328345 (POU3F2-001) 98834592-98839490 protein_coding
ENSG00000187472 (RP11-67P15.1)
 ENST00000340697 (RP11-67P15.1-001) 98780257-98793992 processed_pseudogene
ENSG00000220505 (EIF4EBP2P3)
eukaryotic translation initiation factor 4E binding protein 2 pseudogene 3 		ENST00000403144 (EIF4EBP2P3-001) 98179499-98179832 processed_pseudogene
ENSG00000224849 (RP1-104O17.1)
 ENST00000433637 (RP1-104O17.1-001) 97702281-97708103 lincRNA
ENSG00000226207 (RP1-104O17.3)
 ENST00000432438 (RP1-104O17.3-001) 97710953-97717197 lincRNA
ENSG00000226684 (RP3-418C23.2)
 ENST00000457513 (RP3-418C23.2-001) 97283303-97306098 lincRNA
ENST00000574739 (RP3-418C23.2-003) 97305586-97310048 lincRNA
ENSG00000236920 (RP11-111D3.2)
 ENST00000418652 (RP11-111D3.2-001) 98210020-98214683 lincRNA
ENSG00000271860 (RP11-436D23.1)
 ENST00000606913 (RP11-436D23.1-001) 97885501-98398863 lincRNA
ENST00000607032 (RP11-436D23.1-002) 97938789-98398771 lincRNA
ENST00000607823 (RP11-436D23.1-003) 97816709-98399872 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001Y3_0001ENSDARG00000074691ENSDART00000110263ENSDART00000134381ENSDART00000136517ENSDART00000143859ENSDARG00000076262ENSDART00000093250ENSDARG00000097514ENSDART00000154886ENSDART00000155056CIL_0001Y3_0002ENSG00000146263ENST00000275053ENST00000369251ENST00000482634ENST00000484170ENST00000496119ENST00000506256ENST00000508820ENST00000508976ENST00000509383ENST00000510018ENST00000511335ENST00000514790ENSG00000184486ENST00000328345ENSG00000187472ENST00000340697ENSG00000220505ENST00000403144ENSG00000224849ENST00000433637ENSG00000226207ENST00000432438ENSG00000226684ENST00000457513ENST00000574739ENSG00000236920ENST00000418652ENSG00000271860ENST00000606913ENST00000607032ENST00000607823
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001Y3_0001ENSDARG00000074691ENSDART00000110263ENSDART00000134381ENSDARG00000076262ENSDART00000093250ENSDARG00000097514ENSDART00000154886CIL_0001Y3_0002ENSG00000146263ENST00000275053ENST00000369251ENST00000496119ENST00000506256ENST00000508820ENST00000509383ENST00000511335ENSG00000184486ENST00000328345ENSG00000187472ENST00000340697ENSG00000220505ENST00000403144ENSG00000224849ENST00000433637ENSG00000226207ENST00000432438ENSG00000226684ENST00000457513ENST00000574739ENSG00000236920ENST00000418652ENSG00000271860ENST00000606913ENST00000607032ENST00000607823
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000074691 ENSDART00000110263 N/A N/A N/A 0.162±0.12 N/A N/A 0.333±0.19 0.281±0.00 N/A N/A 0.439±0.00 N/A N/A N/A
ENSDART00000134381 N/A N/A N/A N/A N/A N/A 0.324±0.00 1.682±0.00 0.123±0.00 N/A N/A N/A N/A N/A
ENSDART00000136517 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000143859 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000076262 ENSDART00000093250 N/A N/A N/A 8.794±5.98 N/A N/A 0.026±0.00 0.050±0.00 0.043±0.00 N/A 0.387±0.00 N/A N/A N/A
ENSDARG00000097514 ENSDART00000154886 N/A N/A N/A 0.199±0.03 N/A N/A 0.131±0.08 0.937±0.52 0.107±0.00 N/A N/A N/A N/A N/A
ENSDART00000155056 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000146263 ENST00000275053 0.103±0.00 0.439±0.00 N/A 0.307±0.00 N/A 0.234±0.00 0.062±0.00 N/A 0.276±0.25 0.105±0.00 N/A 0.295±0.14 0.371±0.26 0.807±0.41
ENST00000369251 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.086±0.00 0.025±0.00 1.308±0.00 N/A 2.053±0.54
ENST00000482634 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484170 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496119 N/A N/A N/A N/A N/A N/A N/A 0.724±0.00 N/A N/A N/A N/A N/A N/A
ENST00000506256 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.134±0.00 N/A N/A N/A
ENST00000508820 N/A N/A N/A N/A 0.322±0.00 0.391±0.00 N/A 0.101±0.00 N/A N/A N/A 0.498±0.00 N/A N/A
ENST00000508976 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509383 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.571±0.00 N/A N/A N/A N/A
ENST00000510018 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511335 0.094±0.00 0.223±0.00 0.117±0.00 0.079±0.02 0.116±0.00 N/A 0.055±0.00 0.084±0.00 0.023±0.00 0.209±0.00 0.010±0.01 0.147±0.09 0.069±0.00 N/A
ENST00000514790 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000184486 ENST00000328345 0.013±0.00 0.014±0.00 N/A 2.002±0.52 0.008±0.00 0.017±0.00 0.008±0.01 0.005±0.00 0.010±0.00 0.033±0.00 N/A 0.007±0.00 0.017±0.00 0.275±0.11
ENSG00000187472 ENST00000340697 0.049±0.00 0.157±0.00 N/A N/A 0.205±0.00 N/A N/A 0.051±0.00 N/A N/A N/A 0.595±0.00 N/A 0.136±0.00
ENSG00000220505 ENST00000403144 N/A N/A N/A 0.107±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000224849 ENST00000433637 N/A N/A N/A 0.353±0.00 N/A N/A N/A N/A 0.309±0.00 1.257±0.00 N/A N/A N/A 0.018±0.00
ENSG00000226207 ENST00000432438 N/A N/A N/A 0.187±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.053±0.00
ENSG00000226684 ENST00000457513 N/A N/A N/A 0.218±0.00 N/A N/A 0.048±0.00 N/A N/A N/A N/A 0.124±0.00 N/A 0.167±0.00
ENST00000574739 N/A N/A N/A 0.621±0.44 N/A N/A N/A N/A N/A 0.061±0.00 N/A N/A N/A N/A
ENSG00000236920 ENST00000418652 N/A N/A N/A 0.040±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000271860 ENST00000606913 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.028±0.00 0.059±0.00
ENST00000607032 N/A N/A N/A 0.485±0.00 0.011±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.048±0.00
ENST00000607823 N/A N/A N/A 0.179±0.11 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.031±0.00

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