C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001Z7_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000166455-ENSG00000140905 CGP 9606 16:81053497-81096403
GeneTranscriptPositionBiotype
ENSG00000140905 (GCSH)
glycine cleavage system protein H (aminomethyl carrier) 		ENST00000315467 (GCSH-001) 81081961-81096403 protein_coding
ENST00000561801 (GCSH-005) 81082823-81096257 nonsense_mediated_decay
ENST00000564386 (GCSH-002) 81082336-81096262 nonsense_mediated_decay
ENST00000564477 (GCSH-003) 81084246-81096318 nonsense_mediated_decay
ENST00000566566 (GCSH-004) 81084316-81096299 protein_coding
ENST00000569885 (GCSH-006) 81082509-81096240 protein_coding
ENSG00000166455 (C16orf46)
chromosome 16 open reading frame 46 		ENST00000299578 (C16orf46-001) 81060980-81077244 protein_coding
ENST00000378611 (C16orf46-002) 81053497-81077213 protein_coding
ENST00000444657 (C16orf46-004) 81061710-81077267 processed_transcript
ENST00000565253 (C16orf46-005) 81063754-81077078 protein_coding
ENSG00000245059 (RP11-303E16.7)
 ENST00000501068 (RP11-303E16.7-001) 81077319-81078861 lincRNA
ENSG00000260643 (RP11-303E16.8)
 ENST00000564536 (RP11-303E16.8-001) 81053665-81087651 processed_transcript
ENSG00000261141 (RP11-303E16.5)
 ENST00000562450 (RP11-303E16.5-001) 81055301-81056426 antisense
ENSG00000261838 (RP11-303E16.6)
 ENST00000563072 (RP11-303E16.6-002) 81071998-81076598 antisense
ENST00000568362 (RP11-303E16.6-001) 81069854-81076598 antisense

Homo sapiens Ensembl (GRCh38)

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CIL_0001Z7_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000031847-ENSMUSG00000034424 CGP 10090 8:116969599-116993537
GeneTranscriptPositionBiotype
ENSMUSG00000031847 (1700030J22Rik)
RIKEN cDNA 1700030J22 gene 		ENSMUST00000070577 (1700030J22Rik-201) 116969599-116978943 protein_coding
ENSMUSG00000034424 (Gcsh)
glycine cleavage system protein H (aminomethyl carrier) 		ENSMUST00000040484 (Gcsh-001) 116981810-116993537 protein_coding
ENSMUST00000162548 (Gcsh-002) 116983836-116991361 processed_transcript

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001Z7_0001ENSG00000140905ENST00000315467ENST00000561801ENST00000564386ENST00000564477ENST00000566566ENST00000569885ENSG00000166455ENST00000299578ENST00000378611ENST00000444657ENST00000565253ENSG00000245059ENST00000501068ENSG00000260643ENST00000564536ENSG00000261141ENST00000562450ENSG00000261838ENST00000563072ENST00000568362CIL_0001Z7_0002ENSMUSG00000031847ENSMUST00000070577ENSMUSG00000034424ENSMUST00000040484ENSMUST00000162548
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001Z7_0001ENSG00000140905ENST00000315467ENST00000561801ENST00000564386ENST00000566566ENST00000569885ENSG00000166455ENST00000299578ENST00000378611ENST00000565253ENSG00000245059ENST00000501068ENSG00000260643ENST00000564536ENSG00000261141ENST00000562450ENSG00000261838ENST00000563072ENST00000568362CIL_0001Z7_0002ENSMUSG00000031847ENSMUST00000070577ENSMUSG00000034424ENSMUST00000040484ENSMUST00000162548
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000140905 ENST00000315467 N/A 1.798±0.00 2.955±0.00 9.516±0.18 4.603±1.03 1.281±0.00 2.805±0.31 11.718±4.04 4.582±2.87 1.111±0.00 4.371±0.45 3.656±1.80 5.359±2.06 4.423±0.00
ENST00000561801 N/A N/A N/A N/A N/A 4.860±0.00 N/A N/A N/A 2.672±0.00 N/A 33.694±0.00 73.841±0.00 15.703±0.00
ENST00000564386 2.633±0.00 6.507±0.00 2.106±0.00 15.277±0.00 10.815±0.00 2.487±1.22 5.742±0.00 8.973±1.77 21.809±0.00 1.137±0.28 3.113±0.00 8.643±4.93 17.188±1.88 8.285±0.00
ENST00000564477 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566566 N/A 4.103±0.00 2.535±0.00 N/A N/A N/A N/A N/A 1.811±0.00 N/A N/A 18.508±0.00 21.248±13.29 6.661±0.00
ENST00000569885 N/A N/A N/A N/A N/A 2.904±0.00 N/A 7.103±0.00 N/A 1.530±0.00 4.652±0.00 7.843±0.00 18.002±0.00 N/A
ENSG00000166455 ENST00000299578 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.932±0.00
ENST00000378611 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.909±0.00 N/A N/A N/A 2.820±0.07
ENST00000444657 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565253 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.173±0.00 N/A N/A N/A N/A
ENSG00000245059 ENST00000501068 0.015±0.00 0.207±0.00 N/A 0.236±0.13 0.155±0.01 0.097±0.00 0.068±0.02 0.301±0.00 0.026±0.00 N/A 0.013±0.00 0.043±0.03 0.042±0.01 0.181±0.03
ENSG00000260643 ENST00000564536 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.138±0.00 N/A N/A N/A 7.004±0.00
ENSG00000261141 ENST00000562450 0.121±0.00 0.118±0.00 0.452±0.00 0.371±0.30 0.166±0.08 0.267±0.00 0.019±0.00 0.349±0.00 0.153±0.00 0.385±0.00 N/A 0.280±0.29 0.115±0.00 0.285±0.00
ENSG00000261838 ENST00000563072 N/A N/A N/A 0.039±0.00 N/A N/A N/A 0.144±0.00 N/A 0.113±0.00 N/A 0.126±0.03 3.352±1.15 0.133±0.00
ENST00000568362 N/A N/A N/A N/A 0.073±0.00 N/A N/A 0.071±0.00 0.233±0.00 N/A N/A 0.937±0.00 1.185±0.00 5.912±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031847 ENSMUST00000070577 0.269±0.11 0.196±0.10 0.220±0.00 1.205±0.22 0.150±0.04 0.317±0.08 0.140±0.05 0.420±0.20 0.144±0.07 0.795±0.07 0.041±0.01 0.843±0.17 0.982±0.53 60.940±14.87
ENSMUSG00000034424 ENSMUST00000040484 36.868±14.11 46.032±11.15 25.865±1.52 18.294±3.96 26.835±5.47 16.252±1.65 16.024±4.20 66.249±3.01 51.331±12.28 8.850±0.87 18.538±3.86 39.481±6.63 40.980±33.75 5.017±1.08
ENSMUST00000162548 N/A N/A N/A 43.030±0.00 N/A N/A N/A N/A N/A N/A N/A 72.545±0.00 43.254±32.45 24.146±0.00

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