C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001ZE_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000182447-ENSG00000090402 CGP 9606 3:161496808-165078495
GeneTranscriptPositionBiotype
ENSG00000090402 (SI)
sucrase-isomaltase (alpha-glucosidase) 		ENST00000264382 (SI-001) 164978898-165078495 protein_coding
ENST00000463607 (SI-003) 165074425-165076014 retained_intron
ENST00000476593 (SI-002) 165068719-165078495 nonsense_mediated_decay
ENSG00000182447 (OTOL1)
otolin 1 		ENST00000327928 (OTOL1-001) 161496808-161503942 protein_coding
ENSG00000214210 (RP11-208P4.1)
 ENST00000483240 (RP11-208P4.1-001) 164001606-164002465 processed_pseudogene
ENSG00000240354 (RP11-774I5.1)
 ENST00000497285 (RP11-774I5.1-001) 161816909-161821908 lincRNA
ENSG00000240792 (RP11-418B12.1)
 ENST00000477099 (RP11-418B12.1-001) 163475067-163479365 lincRNA
ENSG00000241168 (RP11-10O22.1)
 ENST00000490357 (RP11-10O22.1-001) 163026396-163232149 lincRNA
ENSG00000241636 (LINC01323)
long intergenic non-protein coding RNA 1323 		ENST00000486767 (LINC01323-001) 164670878-164686076 lincRNA
ENSG00000241767 (LINC01324)
long intergenic non-protein coding RNA 1324 		ENST00000463978 (LINC01324-002) 164714095-164731036 lincRNA
ENST00000497379 (LINC01324-001) 164714101-164831480 lincRNA
ENSG00000244571 (RP11-535I24.2)
 ENST00000494693 (RP11-535I24.2-001) 163115429-163116186 processed_pseudogene
CIL_0001ZE_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000027788-ENSMUSG00000027790 CGP 10090 3:70007613-72967863
GeneTranscriptPositionBiotype
ENSMUSG00000027788 (Otol1)
otolin 1 homolog (zebrafish) 		ENSMUST00000053013 (Otol1-001) 70007613-70028708 protein_coding
ENSMUSG00000027790 (Sis)
sucrase isomaltase (alpha-glucosidase) 		ENSMUST00000094190 (Sis-201) 72888560-72966866 protein_coding
ENSMUST00000167334 (Sis-001) 72888557-72967863 protein_coding
ENSMUST00000170445 (Sis-002) 72965092-72967860 retained_intron
ENSMUSG00000074877 (Gm10780)
predicted gene 10780 		ENSMUST00000099459 (Gm10780-201) 70689092-70689380 pseudogene
ENSMUSG00000097252 (Gm6634)
predicted gene 6634 		ENSMUST00000180497 (Gm6634-201) 70772379-70807291 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001ZE_0001ENSG00000090402ENST00000264382ENST00000463607ENST00000476593ENSG00000182447ENST00000327928ENSG00000214210ENST00000483240ENSG00000240354ENST00000497285ENSG00000240792ENST00000477099ENSG00000241168ENST00000490357ENSG00000241636ENST00000486767ENSG00000241767ENST00000463978ENST00000497379ENSG00000244571ENST00000494693CIL_0001ZE_0002ENSMUSG00000027788ENSMUST00000053013ENSMUSG00000027790ENSMUST00000094190ENSMUST00000167334ENSMUST00000170445ENSMUSG00000074877ENSMUST00000099459ENSMUSG00000097252ENSMUST00000180497
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001ZE_0001ENSG00000090402ENST00000264382ENST00000476593ENSG00000182447ENST00000327928ENSG00000214210ENST00000483240ENSG00000240354ENST00000497285ENSG00000240792ENST00000477099ENSG00000241168ENST00000490357ENSG00000241636ENST00000486767ENSG00000241767ENST00000463978ENST00000497379ENSG00000244571ENST00000494693CIL_0001ZE_0002ENSMUSG00000027788ENSMUST00000053013ENSMUSG00000027790ENSMUST00000094190ENSMUST00000167334ENSMUST00000170445ENSMUSG00000074877ENSMUST00000099459ENSMUSG00000097252ENSMUST00000180497
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000090402 ENST00000264382 N/A N/A N/A 0.015±0.00 N/A 2.858±2.36 N/A 0.020±0.00 N/A 0.009±0.00 N/A N/A N/A 0.692±0.33
ENST00000463607 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000476593 N/A N/A N/A N/A N/A N/A N/A N/A 0.498±0.00 N/A N/A N/A N/A N/A
ENSG00000182447 ENST00000327928 N/A N/A N/A 0.139±0.11 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.073±0.00
ENSG00000214210 ENST00000483240 N/A 0.020±0.00 0.072±0.00 0.047±0.00 N/A 0.074±0.02 0.074±0.00 0.021±0.00 0.071±0.00 0.571±0.00 0.105±0.09 0.184±0.10 0.038±0.00 0.157±0.00
ENSG00000240354 ENST00000497285 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.209±0.00
ENSG00000240792 ENST00000477099 0.016±0.00 0.015±0.00 N/A N/A 0.014±0.00 0.013±0.00 0.014±0.00 0.059±0.00 N/A 0.012±0.00 N/A N/A N/A 0.073±0.06
ENSG00000241168 ENST00000490357 0.192±0.00 0.614±0.00 0.067±0.00 0.337±0.27 0.144±0.12 0.202±0.15 0.221±0.17 0.282±0.03 0.463±0.44 0.200±0.14 0.068±0.02 0.159±0.10 0.157±0.11 0.376±0.00
ENSG00000241636 ENST00000486767 N/A N/A N/A N/A 0.077±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000241767 ENST00000463978 N/A N/A N/A N/A N/A 0.061±0.00 N/A N/A N/A N/A N/A 0.053±0.00 N/A N/A
ENST00000497379 N/A N/A N/A N/A 0.093±0.00 N/A N/A 0.055±0.00 N/A N/A N/A N/A N/A 0.088±0.01
ENSG00000244571 ENST00000494693 N/A N/A N/A N/A N/A N/A 0.154±0.00 N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027788 ENSMUST00000053013 N/A N/A N/A 0.020±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.218±0.23 0.007±0.00
ENSMUSG00000027790 ENSMUST00000094190 N/A N/A 0.003±0.00 0.005±0.00 N/A 0.258±0.13 N/A N/A 0.001±0.00 N/A N/A 0.035±0.02 0.002±0.00 0.005±0.00
ENSMUST00000167334 N/A N/A N/A N/A N/A 0.220±0.10 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000170445 0.058±0.00 N/A N/A N/A N/A 0.434±0.18 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000074877 ENSMUST00000099459 N/A N/A N/A 3.078±2.80 N/A N/A 0.350±0.09 N/A 0.809±0.00 0.335±0.00 N/A N/A 1.317±0.84 0.302±0.01
ENSMUSG00000097252 ENSMUST00000180497 0.031±0.00 N/A 0.030±0.00 N/A 0.035±0.00 N/A 0.183±0.12 0.029±0.00 N/A 0.103±0.03 0.010±0.00 0.023±0.01 0.018±0.01 0.047±0.03

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