C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00020O_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000155755-ENSG00000082126 CGP 9606 2:201620184-201698694
GeneTranscriptPositionBiotype
ENSG00000082126 (MPP4)
membrane protein, palmitoylated 4 (MAGUK p55 subfamily member 4) 		ENST00000315506 (MPP4-002) 201644870-201698694 protein_coding
ENST00000359962 (MPP4-201) 201644875-201698694 protein_coding
ENST00000396886 (MPP4-008) 201644875-201698057 protein_coding
ENST00000409143 (MPP4-007) 201645105-201698068 protein_coding
ENST00000409474 (MPP4-001) 201644870-201698694 protein_coding
ENST00000409818 (MPP4-011) 201654837-201698669 nonsense_mediated_decay
ENST00000428900 (MPP4-009) 201644897-201697996 protein_coding
ENST00000447335 (MPP4-010) 201645156-201694057 protein_coding
ENST00000483841 (MPP4-006) 201680065-201698631 retained_intron
ENST00000486212 (MPP4-004) 201665064-201698683 retained_intron
ENST00000602867 (MPP4-012) 201685935-201698633 protein_coding
ENST00000620095 (MPP4-202) 201644875-201698694 protein_coding
ENSG00000155755 (TMEM237)
transmembrane protein 237 		ENST00000286196 (TMEM237-008) 201623756-201643484 nonsense_mediated_decay
ENST00000409444 (TMEM237-002) 201620184-201642944 protein_coding
ENST00000409883 (TMEM237-001) 201620184-201643517 protein_coding
ENST00000432684 (TMEM237-003) 201629288-201643570 nonsense_mediated_decay
ENST00000444047 (TMEM237-012) 201629730-201643402 nonsense_mediated_decay
ENST00000463205 (TMEM237-010) 201638451-201642653 retained_intron
ENST00000466641 (TMEM237-006) 201627360-201633403 processed_transcript
ENST00000466839 (TMEM237-013) 201627387-201631375 processed_transcript
ENST00000471318 (TMEM237-016) 201623882-201629420 processed_transcript
ENST00000480124 (TMEM237-014) 201636170-201639031 retained_intron
ENST00000489550 (TMEM237-011) 201632149-201643418 processed_transcript
ENST00000495329 (TMEM237-007) 201620186-201626323 retained_intron
ENST00000621467 (TMEM237-201) 201623700-201642692 protein_coding
ENSG00000241790 (ENO1P4)
enolase 1, (alpha) pseudogene 4 		ENST00000416471 (ENO1P4-001) 201621646-201623430 processed_pseudogene
CIL_00020O_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000038079-ENSMUSG00000079550 CGP 10090 1:59100590-59163389
GeneTranscriptPositionBiotype
ENSMUSG00000026024 (Als2)
amyotrophic lateral sclerosis 2 (juvenile) 		ENSMUST00000027178 (Als2-001) 59162926-59237231 protein_coding
ENSMUST00000159166 (Als2-003) 59191609-59237231 retained_intron
ENSMUST00000160945 (Als2-004) 59215651-59237226 protein_coding
ENSMUST00000163058 (Als2-002) 59164058-59237093 protein_coding
ENSMUST00000188469 (Als2-005) 59216344-59219126 retained_intron
ENSMUSG00000038079 (Tmem237)
transmembrane protein 237 		ENSMUST00000087475 (Tmem237-003) 59100597-59119806 protein_coding
ENSMUST00000094917 (Tmem237-001) 59100590-59120094 protein_coding
ENSMUST00000185951 (Tmem237-006) 59108784-59114316 retained_intron
ENSMUST00000186395 (Tmem237-005) 59109090-59120408 protein_coding
ENSMUST00000186794 (Tmem237-002) 59100911-59120382 protein_coding
ENSMUST00000186820 (Tmem237-007) 59109871-59115958 retained_intron
ENSMUST00000190014 (Tmem237-004) 59108195-59120112 protein_coding
ENSMUSG00000097573 (G730003C15Rik)
RIKEN cDNA G730003C15 gene 		ENSMUST00000180570 (G730003C15Rik-201) 59119833-59122139 antisense
ENSMUST00000189096 (G730003C15Rik-001) 59119833-59122141 antisense
ENSMUSG00000099563 (RP24-89C18.2)
predicted gene, 19125 		ENSMUST00000188408 (RP24-89C18.2-001) 59155607-59156989 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00020O_0001ENSG00000082126ENST00000315506ENST00000359962ENST00000396886ENST00000409143ENST00000409474ENST00000409818ENST00000428900ENST00000447335ENST00000483841ENST00000486212ENST00000602867ENST00000620095ENSG00000155755ENST00000286196ENST00000409444ENST00000409883ENST00000432684ENST00000444047ENST00000463205ENST00000466641ENST00000466839ENST00000471318ENST00000480124ENST00000489550ENST00000495329ENST00000621467ENSG00000241790ENST00000416471CIL_00020O_0002ENSMUSG00000026024ENSMUST00000027178ENSMUST00000159166ENSMUST00000160945ENSMUST00000163058ENSMUST00000188469ENSMUSG00000038079ENSMUST00000087475ENSMUST00000094917ENSMUST00000185951ENSMUST00000186395ENSMUST00000186794ENSMUST00000186820ENSMUST00000190014ENSMUSG00000097573ENSMUST00000180570ENSMUST00000189096ENSMUSG00000099563ENSMUST00000188408
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00020O_0001ENSG00000082126ENST00000315506ENST00000396886ENST00000409143ENST00000409818ENST00000428900ENST00000447335ENST00000483841ENST00000486212ENST00000602867ENSG00000155755ENST00000286196ENST00000409444ENST00000409883ENST00000432684ENST00000466641ENST00000471318ENST00000489550ENST00000495329ENST00000621467ENSG00000241790ENST00000416471CIL_00020O_0002ENSMUSG00000026024ENSMUST00000027178ENSMUST00000159166ENSMUSG00000038079ENSMUST00000087475ENSMUST00000094917ENSMUST00000186794ENSMUSG00000097573ENSMUST00000180570ENSMUST00000189096ENSMUSG00000099563ENSMUST00000188408
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000082126 ENST00000315506 N/A N/A N/A N/A 0.067±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000359962 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000396886 N/A N/A N/A 0.026±0.00 N/A 0.020±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000409143 0.023±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.045±0.00 N/A
ENST00000409474 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000409818 0.013±0.00 0.162±0.00 N/A 0.037±0.00 0.041±0.00 0.029±0.00 N/A N/A 0.025±0.00 0.103±0.00 0.008±0.00 N/A N/A N/A
ENST00000428900 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.086±0.00 N/A N/A
ENST00000447335 N/A N/A 0.029±0.00 N/A N/A N/A 0.013±0.00 0.093±0.00 N/A N/A N/A N/A 0.041±0.00 N/A
ENST00000483841 N/A N/A N/A 0.037±0.00 N/A N/A N/A N/A 0.038±0.00 0.053±0.00 N/A N/A N/A N/A
ENST00000486212 N/A 0.026±0.00 N/A 0.022±0.00 0.072±0.05 0.108±0.00 0.044±0.00 N/A 0.083±0.00 0.072±0.00 0.038±0.00 0.067±0.05 0.022±0.00 N/A
ENST00000602867 0.064±0.00 N/A 0.872±0.00 N/A 0.212±0.00 N/A N/A N/A 0.161±0.00 N/A N/A N/A N/A N/A
ENST00000620095 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000155755 ENST00000286196 0.814±0.00 1.161±0.00 N/A N/A 2.605±0.00 0.967±0.55 1.439±0.76 2.021±0.00 0.389±0.00 1.949±0.00 2.864±0.00 2.972±1.43 1.854±0.41 2.416±0.08
ENST00000409444 0.597±0.00 0.627±0.00 0.876±0.00 2.472±0.47 0.872±0.27 N/A 0.423±0.08 0.393±0.00 0.795±0.00 N/A 1.013±0.00 1.180±0.89 0.191±0.02 0.607±0.07
ENST00000409883 N/A 0.722±0.00 N/A 1.814±0.00 0.935±0.00 0.472±0.16 0.627±0.00 0.675±0.00 0.125±0.00 0.500±0.00 1.026±0.00 1.816±0.87 0.340±0.12 N/A
ENST00000432684 1.633±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.458±0.00 N/A N/A N/A
ENST00000444047 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000463205 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466641 N/A N/A N/A N/A N/A 2.752±0.00 2.760±0.00 N/A N/A N/A N/A 12.846±0.00 6.302±4.53 8.218±3.99
ENST00000466839 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000471318 N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.279±0.00 N/A N/A N/A N/A
ENST00000480124 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489550 N/A N/A N/A N/A N/A N/A N/A 1.217±0.00 N/A N/A N/A N/A N/A 5.596±0.00
ENST00000495329 N/A 0.546±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000621467 0.798±0.00 N/A N/A N/A N/A N/A N/A N/A 0.511±0.00 N/A N/A N/A 0.866±0.00 N/A
ENSG00000241790 ENST00000416471 N/A N/A N/A N/A N/A N/A 0.467±0.00 0.261±0.00 1.135±0.00 1.467±0.00 1.234±0.00 2.000±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026024 ENSMUST00000027178 4.366±0.61 1.672±0.32 3.908±0.14 8.591±1.01 3.081±0.49 1.151±0.43 1.720±0.14 6.271±0.68 9.761±4.92 3.430±0.13 4.668±0.30 3.301±1.29 10.736±3.12 3.370±0.64
ENSMUST00000159166 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.350±0.00 N/A N/A
ENSMUST00000160945 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000163058 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000188469 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000038079 ENSMUST00000087475 5.762±1.05 2.201±0.00 7.547±1.52 8.504±2.34 5.344±0.00 1.578±0.09 N/A 6.701±0.97 4.056±0.42 7.290±0.48 N/A 4.978±1.00 4.533±0.00 6.928±0.00
ENSMUST00000094917 N/A 2.533±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000185951 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000186395 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000186794 N/A 2.667±0.00 N/A 8.819±0.00 3.934±0.11 N/A 1.627±0.31 6.289±0.00 N/A N/A N/A 4.989±0.00 N/A 9.278±2.87
ENSMUST00000186820 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000190014 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000097573 ENSMUST00000180570 N/A 1.538±0.66 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.405±0.68
ENSMUST00000189096 N/A 1.062±0.17 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000099563 ENSMUST00000188408 0.025±0.00 N/A 0.012±0.00 0.020±0.01 N/A N/A N/A 0.085±0.05 0.069±0.04 0.052±0.00 N/A 0.023±0.01 0.028±0.02 0.023±0.00

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