C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000221_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000005368-ENSDARG00000074074 CGP 7955 15:22625410-22712355
GeneTranscriptPositionBiotype
ENSDARG00000005368 (mcamb)
melanoma cell adhesion molecule b 		ENSDART00000020425 (mcamb-001) 22625410-22696300 protein_coding
ENSDART00000115362 (mcamb-201) 22625412-22696183 protein_coding
ENSDARG00000074074 (rnf26)
ring finger protein 26 		ENSDART00000113279 (rnf26-001) 22710148-22712355 protein_coding
ENSDART00000156114 (rnf26-201) 22710789-22712066 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_000221_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000076706-ENSG00000173456 CGP 9606 11:119308529-119337313
GeneTranscriptPositionBiotype
ENSG00000076706 (MCAM)
melanoma cell adhesion molecule 		ENST00000264036 (MCAM-001) 119308529-119317116 protein_coding
ENST00000524940 (MCAM-005) 119309887-119311118 processed_transcript
ENST00000525555 (MCAM-009) 119314870-119317130 processed_transcript
ENST00000525586 (MCAM-002) 119308986-119318377 retained_intron
ENST00000526190 (MCAM-007) 119314722-119317130 retained_intron
ENST00000526992 (MCAM-018) 119314990-119315820 processed_transcript
ENST00000528502 (MCAM-011) 119314692-119317130 processed_transcript
ENST00000528533 (MCAM-003) 119308972-119317130 retained_intron
ENST00000528976 (MCAM-016) 119309987-119311381 processed_transcript
ENST00000529257 (MCAM-017) 119314502-119316066 processed_transcript
ENST00000529295 (MCAM-013) 119314505-119316842 processed_transcript
ENST00000529686 (MCAM-010) 119314694-119317130 processed_transcript
ENST00000530006 (MCAM-006) 119314616-119317129 retained_intron
ENST00000530144 (MCAM-014) 119314893-119321521 processed_transcript
ENST00000530706 (MCAM-012) 119312872-119317130 processed_transcript
ENST00000530937 (MCAM-008) 119314685-119317130 retained_intron
ENST00000534522 (MCAM-015) 119314887-119318891 processed_transcript
ENSG00000173456 (RNF26)
ring finger protein 26 		ENST00000311413 (RNF26-001) 119334527-119337313 protein_coding
ENSG00000245385 (RP11-334E6.10)
 ENST00000501918 (RP11-334E6.10-001) 119336249-119337309 antisense

Homo sapiens Ensembl (GRCh38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000221_0001ENSDARG00000005368ENSDART00000020425ENSDART00000115362ENSDARG00000074074ENSDART00000113279ENSDART00000156114CIL_000221_0002ENSG00000076706ENST00000264036ENST00000524940ENST00000525555ENST00000525586ENST00000526190ENST00000526992ENST00000528502ENST00000528533ENST00000528976ENST00000529257ENST00000529295ENST00000529686ENST00000530006ENST00000530144ENST00000530706ENST00000530937ENST00000534522ENSG00000173456ENST00000311413ENSG00000245385ENST00000501918
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000221_0001ENSDARG00000005368ENSDART00000020425ENSDART00000115362ENSDARG00000074074ENSDART00000113279ENSDART00000156114CIL_000221_0002ENSG00000076706ENST00000264036ENST00000528533ENSG00000173456ENST00000311413ENSG00000245385ENST00000501918
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000005368 ENSDART00000020425 N/A N/A N/A 6.184±0.11 N/A N/A 19.095±3.60 0.944±0.00 0.227±0.00 N/A 6.772±0.00 N/A N/A N/A
ENSDART00000115362 N/A N/A N/A 8.652±4.40 N/A N/A 30.995±16.42 2.548±0.07 N/A N/A 3.925±0.00 N/A N/A N/A
ENSDARG00000074074 ENSDART00000113279 N/A N/A N/A 2.559±1.49 N/A N/A 2.552±1.52 4.663±1.85 0.888±0.00 N/A 1.026±0.00 N/A N/A N/A
ENSDART00000156114 N/A N/A N/A 3.248±0.00 N/A N/A N/A N/A 0.322±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000076706 ENST00000264036 126.097±0.00 84.315±0.00 0.423±0.00 16.583±13.01 145.454±132.30 40.607±33.92 13.980±9.89 11.341±10.76 16.244±14.06 72.132±62.26 10.787±6.71 27.018±15.24 114.487±23.21 37.284±34.24
ENST00000524940 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000525555 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000525586 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000526190 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000526992 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000528502 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000528533 N/A N/A N/A 6.130±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 12.913±0.00 1.335±0.00
ENST00000528976 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000529257 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000529295 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000529686 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000530006 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000530144 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000530706 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000530937 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000534522 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000173456 ENST00000311413 9.375±0.00 11.698±0.00 1.210±0.00 4.694±2.30 6.138±4.68 5.060±2.93 2.307±1.69 4.862±3.37 4.451±3.35 3.952±2.65 5.870±0.00 9.169±4.29 15.017±3.09 9.284±1.98
ENSG00000245385 ENST00000501918 13.341±0.00 18.960±0.00 N/A 6.410±5.00 14.024±0.00 13.822±0.00 4.591±0.00 11.916±0.00 16.201±0.00 5.372±4.01 8.554±0.00 11.889±4.48 17.816±6.88 11.505±6.72

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