C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_00022L_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000058924-ENSDARG00000002773 CGP 7955 9:19750931-19923764
GeneTranscriptPositionBiotype
ENSDARG00000002773 (htr1fa)
5-hydroxytryptamine (serotonin) receptor 1Fa
ENSDART00000040449 (htr1fa-001) 19922743-19923758 protein_coding
ENSDART00000157259 (htr1fa-201) 19922691-19923764 protein_coding
ENSDARG00000058924 (pou1f1)
POU domain, class 1, transcription factor 1
ENSDART00000081878 (pou1f1-001) 19750931-19780028 protein_coding
ENSDARG00000095279 (si:ch211-277p15.1)
si:ch211-277p15.1
ENSDART00000134600 (si:ch211-277p15.1-001) 19909438-19910012 processed_transcript
CIL_00022L_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000064835-ENSG00000179097 CGP 9606 3:87259404-87993835
GeneTranscriptPositionBiotype
ENSG00000179097 (HTR1F)
5-hydroxytryptamine (serotonin) receptor 1F, G protein-coupled
ENST00000319595 (HTR1F-001) 87990696-87993835 protein_coding
ENSG00000221059 (RNU6ATAC6P)
RNA, U6atac small nuclear 6, pseudogene
ENST00000408132 (RNU6ATAC6P-201) 87910220-87910345 snRNA
ENSG00000239572 (RP11-451B8.1)
ENST00000462792 (RP11-451B8.1-001) 87731402-87793629 lincRNA
ENSG00000240255 (PSMC1P6)
proteasome (prosome, macropain) 26S subunit, ATPase, 1 pseudogene 6
ENST00000477233 (PSMC1P6-001) 87630301-87631619 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00022L_0001ENSDARG00000002773ENSDART00000040449ENSDART00000157259ENSDARG00000058924ENSDART00000081878ENSDARG00000095279ENSDART00000134600CIL_00022L_0002ENSG00000179097ENST00000319595ENSG00000221059ENST00000408132ENSG00000239572ENST00000462792ENSG00000240255ENST00000477233
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00022L_0001ENSDARG00000002773ENSDART00000040449ENSDART00000157259ENSDARG00000058924ENSDART00000081878ENSDARG00000095279ENSDART00000134600CIL_00022L_0002ENSG00000179097ENST00000319595ENSG00000221059ENST00000408132ENSG00000239572ENST00000462792ENSG00000240255ENST00000477233
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000002773 ENSDART00000040449 N/A N/A N/A 0.369±0.26 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000157259 N/A N/A N/A 1.285±0.06 N/A N/A N/A N/A N/A N/A 0.210±0.00 N/A N/A N/A
ENSDARG00000058924 ENSDART00000081878 N/A N/A N/A 0.076±0.00 N/A N/A 0.086±0.00 0.062±0.00 N/A N/A 0.336±0.00 N/A N/A N/A
ENSDARG00000095279 ENSDART00000134600 N/A N/A N/A 1.638±1.41 N/A N/A 1.378±0.22 0.716±0.00 0.236±0.00 N/A 0.543±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000179097 ENST00000319595 0.114±0.00 0.073±0.00 0.149±0.00 0.746±0.48 0.160±0.12 0.116±0.04 0.094±0.01 0.135±0.00 0.125±0.00 0.304±0.25 0.033±0.00 0.043±0.03 0.162±0.04 0.118±0.07
ENSG00000221059 ENST00000408132 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.359±0.00 N/A N/A
ENSG00000239572 ENST00000462792 N/A N/A N/A 0.240±0.03 0.230±0.00 N/A 0.018±0.00 0.268±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000240255 ENST00000477233 N/A N/A N/A 0.025±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.015±0.00

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