C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000246_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000117906-ENSG00000140368 CGP 9606 15:76931619-77037332
GeneTranscriptPositionBiotype
ENSG00000117906 (RCN2)
reticulocalbin 2, EF-hand calcium binding domain 		ENST00000320963 (RCN2-002) 76931738-76949860 protein_coding
ENST00000394883 (RCN2-003) 76931755-76949850 protein_coding
ENST00000394885 (RCN2-001) 76931619-76954392 protein_coding
ENST00000557805 (RCN2-006) 76931871-76947489 nonsense_mediated_decay
ENST00000558598 (RCN2-004) 76941401-76948885 retained_intron
ENST00000560833 (RCN2-005) 76943492-76948615 retained_intron
ENSG00000140368 (PSTPIP1)
proline-serine-threonine phosphatase interacting protein 1 		ENST00000379595 (PSTPIP1-002) 76995131-77037331 protein_coding
ENST00000557995 (PSTPIP1-011) 77028343-77037313 processed_transcript
ENST00000558012 (PSTPIP1-001) 76995085-77037332 protein_coding
ENST00000558407 (PSTPIP1-012) 76993359-77025582 protein_coding
ENST00000558870 (PSTPIP1-010) 77032317-77037332 protein_coding
ENST00000559161 (PSTPIP1-017) 76995419-77030574 protein_coding
ENST00000559295 (PSTPIP1-009) 76995574-77037331 protein_coding
ENST00000559750 (PSTPIP1-006) 76995172-77031761 nonsense_mediated_decay
ENST00000559785 (PSTPIP1-003) 76994680-77037301 nonsense_mediated_decay
ENST00000559795 (PSTPIP1-005) 76995126-77024427 retained_intron
ENST00000559856 (PSTPIP1-015) 77018458-77032393 protein_coding
ENST00000559859 (PSTPIP1-013) 77015811-77028598 protein_coding
ENST00000560064 (PSTPIP1-016) 77035694-77037332 retained_intron
ENST00000560223 (PSTPIP1-004) 76995122-77037216 nonsense_mediated_decay
ENST00000560377 (PSTPIP1-007) 76995385-77032863 retained_intron
ENST00000560621 (PSTPIP1-018) 76995362-77025318 processed_transcript
ENST00000560796 (PSTPIP1-008) 76995412-77029556 nonsense_mediated_decay
ENST00000561315 (PSTPIP1-014) 77027725-77031326 retained_intron
ENSG00000243365 (RN7SL278P)
RNA, 7SL, cytoplasmic 278, pseudogene 		ENST00000488843 (RN7SL278P-201) 76976915-76977210 misc_RNA
ENSG00000259565 (KRT8P23)
keratin 8 pseudogene 23 		ENST00000560090 (KRT8P23-001) 76979245-76980451 processed_pseudogene
CIL_000246_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000032320-ENSMUSG00000032322 CGP 10090 9:56041845-56128888
GeneTranscriptPositionBiotype
ENSMUSG00000032320 (Rcn2)
reticulocalbin 2 		ENSMUST00000114276 (Rcn2-001) 56041857-56059077 protein_coding
ENSMUST00000144869 (Rcn2-004) 56041885-56053135 retained_intron
ENSMUST00000147842 (Rcn2-002) 56041845-56061882 nonsense_mediated_decay
ENSMUST00000151585 (Rcn2-003) 56041870-56044226 retained_intron
ENSMUSG00000032322 (Pstpip1)
proline-serine-threonine phosphatase-interacting protein 1 		ENSMUST00000059206 (Pstpip1-001) 56089962-56128888 protein_coding
ENSMUST00000132800 (Pstpip1-006) 56123055-56125992 retained_intron
ENSMUST00000135103 (Pstpip1-005) 56122090-56123757 retained_intron
ENSMUST00000138646 (Pstpip1-003) 56089976-56128872 retained_intron
ENSMUST00000142894 (Pstpip1-007) 56123055-56124047 retained_intron
ENSMUST00000144638 (Pstpip1-004) 56120287-56125933 processed_transcript
ENSMUST00000147360 (Pstpip1-002) 56089976-56128876 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000246_0001ENSG00000117906ENST00000320963ENST00000394883ENST00000394885ENST00000557805ENST00000558598ENST00000560833ENSG00000140368ENST00000379595ENST00000557995ENST00000558012ENST00000558407ENST00000558870ENST00000559161ENST00000559295ENST00000559750ENST00000559785ENST00000559795ENST00000559856ENST00000559859ENST00000560064ENST00000560223ENST00000560377ENST00000560621ENST00000560796ENST00000561315ENSG00000243365ENST00000488843ENSG00000259565ENST00000560090CIL_000246_0002ENSMUSG00000032320ENSMUST00000114276ENSMUST00000144869ENSMUST00000147842ENSMUST00000151585ENSMUSG00000032322ENSMUST00000059206ENSMUST00000132800ENSMUST00000135103ENSMUST00000138646ENSMUST00000142894ENSMUST00000144638ENSMUST00000147360
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000246_0001ENSG00000117906ENST00000320963ENST00000394883ENST00000394885ENST00000557805ENST00000558598ENST00000560833ENSG00000140368ENST00000379595ENST00000557995ENST00000558012ENST00000558407ENST00000558870ENST00000559161ENST00000559295ENST00000559750ENST00000559785ENST00000559795ENST00000559856ENST00000560064ENST00000560223ENST00000560377ENST00000560621ENST00000561315ENSG00000243365ENST00000488843ENSG00000259565ENST00000560090CIL_000246_0002ENSMUSG00000032320ENSMUST00000114276ENSMUST00000144869ENSMUSG00000032322ENSMUST00000059206ENSMUST00000132800ENSMUST00000135103ENSMUST00000138646ENSMUST00000142894ENSMUST00000144638ENSMUST00000147360
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000117906 ENST00000320963 5.325±0.00 3.946±0.00 0.944±0.00 19.898±0.00 5.202±2.08 4.446±3.42 2.969±2.49 9.071±7.93 2.605±1.00 3.187±1.32 1.367±1.19 12.609±11.38 14.369±6.95 40.876±18.29
ENST00000394883 2.859±0.00 8.391±0.00 N/A 16.746±6.88 7.989±5.75 3.051±0.79 3.961±3.34 12.595±0.00 2.627±0.48 10.635±0.00 3.311±2.40 13.552±7.59 9.238±2.08 26.115±0.00
ENST00000394885 0.347±0.00 0.589±0.00 N/A N/A N/A 0.389±0.00 N/A N/A 0.206±0.00 0.280±0.00 N/A 4.773±0.00 4.862±0.00 9.049±0.00
ENST00000557805 N/A N/A 1.102±0.00 N/A N/A N/A N/A N/A N/A N/A 0.364±0.00 84.648±0.00 89.846±0.00 213.089±0.00
ENST00000558598 N/A 1.100±0.00 0.682±0.00 N/A 0.699±0.00 0.725±0.00 0.154±0.00 N/A 0.277±0.00 0.616±0.00 N/A 0.725±0.00 N/A N/A
ENST00000560833 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.272±0.00 N/A N/A N/A N/A
ENSG00000140368 ENST00000379595 N/A 1.922±0.00 N/A N/A N/A N/A N/A N/A 0.226±0.00 1.443±0.00 0.099±0.00 N/A 1.648±0.57 N/A
ENST00000557995 1.359±0.00 4.488±0.00 N/A 0.432±0.00 2.421±0.00 0.318±0.00 0.441±0.00 0.577±0.14 N/A 2.147±0.00 N/A 2.180±0.63 1.741±0.01 0.244±0.00
ENST00000558012 N/A N/A N/A N/A 0.710±0.00 N/A N/A N/A N/A N/A N/A N/A 1.103±0.00 N/A
ENST00000558407 N/A N/A N/A N/A 0.533±0.00 N/A N/A N/A 0.184±0.00 N/A N/A N/A N/A N/A
ENST00000558870 N/A N/A N/A 0.164±0.00 N/A N/A N/A 0.704±0.00 0.446±0.00 4.017±0.00 0.289±0.00 N/A N/A 1.306±0.00
ENST00000559161 1.942±0.00 N/A N/A N/A 1.388±0.00 N/A N/A N/A N/A 2.271±1.71 N/A N/A N/A 1.253±0.00
ENST00000559295 N/A N/A N/A N/A N/A 0.874±0.00 N/A N/A 0.298±0.00 N/A N/A 1.936±0.00 1.142±0.00 N/A
ENST00000559750 N/A 2.116±0.00 N/A N/A N/A N/A 0.243±0.00 0.285±0.04 N/A 1.650±0.00 N/A 0.214±0.00 N/A 0.239±0.00
ENST00000559785 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.109±0.00 N/A
ENST00000559795 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.771±0.00 N/A N/A N/A N/A
ENST00000559856 1.391±0.00 N/A N/A N/A N/A N/A N/A 0.847±0.00 N/A N/A N/A N/A N/A N/A
ENST00000559859 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560064 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.757±0.47 3.057±1.33 N/A 0.739±0.00
ENST00000560223 N/A N/A N/A N/A N/A N/A N/A N/A 0.133±0.00 N/A N/A N/A N/A N/A
ENST00000560377 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.082±0.00 N/A 0.118±0.00
ENST00000560621 N/A N/A 0.804±0.00 N/A N/A N/A N/A N/A 0.263±0.00 N/A 1.125±0.00 0.368±0.00 N/A N/A
ENST00000560796 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561315 N/A N/A N/A 0.835±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000243365 ENST00000488843 0.256±0.00 0.696±0.00 N/A 0.388±0.00 0.599±0.00 0.133±0.00 0.192±0.00 0.216±0.00 0.064±0.00 N/A 0.307±0.00 N/A N/A 0.335±0.18
ENSG00000259565 ENST00000560090 N/A N/A N/A 0.036±0.02 N/A 0.072±0.00 N/A 0.020±0.00 N/A 0.020±0.00 N/A 0.031±0.01 N/A 0.045±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000032320 ENSMUST00000114276 16.585±4.21 16.612±4.48 49.737±3.94 56.082±13.89 9.959±0.66 7.119±2.02 12.098±1.23 13.478±1.73 6.640±4.22 21.232±1.71 8.691±0.48 19.201±7.41 29.162±3.24 12.344±3.14
ENSMUST00000144869 14.369±7.87 107.354±16.32 N/A N/A 28.608±12.46 24.813±5.13 N/A 16.356±6.14 2.408±0.66 29.248±13.37 N/A 94.708±44.05 N/A N/A
ENSMUST00000147842 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151585 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000032322 ENSMUST00000059206 1.532±0.26 0.578±0.33 2.552±0.18 0.290±0.15 7.429±3.50 1.729±0.67 0.687±0.45 0.289±0.11 2.113±2.02 3.616±0.20 0.326±0.23 1.747±0.50 29.768±25.01 2.427±2.22
ENSMUST00000132800 N/A 0.639±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.076±0.00 N/A N/A
ENSMUST00000135103 N/A N/A N/A 0.154±0.00 N/A N/A 0.331±0.00 0.273±0.00 N/A N/A N/A N/A N/A N/A
ENSMUST00000138646 0.452±0.08 0.187±0.00 0.624±0.00 0.210±0.13 1.113±0.13 N/A 0.133±0.00 0.147±0.03 0.609±0.26 0.909±0.33 0.110±0.06 0.331±0.15 2.205±0.90 N/A
ENSMUST00000142894 N/A N/A N/A N/A N/A 1.280±0.00 N/A N/A 0.176±0.06 N/A N/A N/A N/A N/A
ENSMUST00000144638 N/A N/A N/A 2.481±0.00 N/A N/A N/A N/A N/A N/A N/A 4.767±0.00 89.834±27.90 5.980±0.00
ENSMUST00000147360 0.565±0.00 0.157±0.00 N/A N/A N/A 0.450±0.01 N/A 0.395±0.00 0.321±0.25 N/A 0.096±0.01 0.295±0.08 N/A N/A

Loading