C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00026Q_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000109743-ENSG00000004468 CGP 9606 4:15702950-15853230
GeneTranscriptPositionBiotype
ENSG00000004468 (CD38)
CD38 molecule 		ENST00000226279 (CD38-001) 15778278-15853230 protein_coding
ENST00000502843 (CD38-002) 15778275-15849255 nonsense_mediated_decay
ENST00000506191 (CD38-004) 15778298-15816754 retained_intron
ENST00000510674 (CD38-005) 15816596-15840490 protein_coding
ENST00000511430 (CD38-003) 15778312-15826086 retained_intron
ENSG00000214846 (RP11-115L11.1)
 ENST00000498116 (RP11-115L11.1-001) 15730962-15731627 processed_pseudogene
ENSG00000248188 (RP11-442P12.2)
 ENST00000513715 (RP11-442P12.2-001) 15743196-15743582 processed_pseudogene
CIL_00026Q_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000029082-ENSMUSG00000029084 CGP 10090 5:43818886-43912375
GeneTranscriptPositionBiotype
ENSMUSG00000029082 (Bst1)
bone marrow stromal cell antigen 1 		ENSMUST00000101237 (Bst1-001) 43818893-43843247 protein_coding
ENSMUST00000118126 (Bst1-002) 43821502-43843247 protein_coding
ENSMUST00000125838 (Bst1-004) 43837272-43842242 processed_transcript
ENSMUST00000126976 (Bst1-003) 43818886-43825404 processed_transcript
ENSMUSG00000029084 (Cd38)
CD38 antigen 		ENSMUST00000030964 (Cd38-001) 43868809-43912375 protein_coding
ENSMUSG00000039753 (Fbxl5)
F-box and leucine-rich repeat protein 5 		ENSMUST00000047857 (Fbxl5-001) 43744616-43782149 protein_coding
ENSMUST00000087465 (Fbxl5-005) 43755906-43782121 protein_coding
ENSMUST00000114047 (Fbxl5-002) 43744624-43821639 protein_coding
ENSMUST00000119523 (Fbxl5-003) 43744616-43782118 protein_coding
ENSMUST00000121736 (Fbxl5-006) 43757886-43782137 protein_coding
ENSMUST00000124421 (Fbxl5-007) 43762312-43782118 retained_intron
ENSMUST00000124610 (Fbxl5-010) 43750673-43758413 protein_coding
ENSMUST00000140469 (Fbxl5-009) 43758764-43761113 retained_intron
ENSMUST00000141902 (Fbxl5-004) 43744616-43773600 protein_coding
ENSMUST00000143316 (Fbxl5-008) 43761032-43782102 retained_intron
ENSMUSG00000086479 (Gm16014)
predicted gene 16014 		ENSMUST00000123363 (Gm16014-001) 43876036-43877304 sense_intronic
ENSMUSG00000087281 (Gm16015)
predicted gene 16015 		ENSMUST00000154897 (Gm16015-001) 43909215-43909885 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00026Q_0001ENSG00000004468ENST00000226279ENST00000502843ENST00000506191ENST00000510674ENST00000511430ENSG00000214846ENST00000498116ENSG00000248188ENST00000513715CIL_00026Q_0002ENSMUSG00000029082ENSMUST00000101237ENSMUST00000118126ENSMUST00000125838ENSMUST00000126976ENSMUSG00000029084ENSMUST00000030964ENSMUSG00000039753ENSMUST00000047857ENSMUST00000087465ENSMUST00000114047ENSMUST00000119523ENSMUST00000121736ENSMUST00000124421ENSMUST00000124610ENSMUST00000140469ENSMUST00000141902ENSMUST00000143316ENSMUSG00000086479ENSMUST00000123363ENSMUSG00000087281ENSMUST00000154897
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00026Q_0001ENSG00000004468ENST00000226279ENST00000502843ENST00000506191ENST00000510674ENST00000511430ENSG00000214846ENST00000498116ENSG00000248188ENST00000513715CIL_00026Q_0002ENSMUSG00000029082ENSMUST00000101237ENSMUSG00000029084ENSMUST00000030964ENSMUSG00000039753ENSMUST00000047857ENSMUST00000114047ENSMUST00000121736ENSMUST00000141902ENSMUSG00000086479ENSMUST00000123363ENSMUSG00000087281ENSMUST00000154897
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000004468 ENST00000226279 0.776±0.00 1.772±0.00 N/A 0.933±0.17 0.689±0.37 0.872±0.00 0.836±0.73 0.373±0.00 0.644±0.00 1.010±0.27 1.047±0.71 0.277±0.06 0.246±0.11 N/A
ENST00000502843 N/A N/A 0.347±0.00 N/A 2.245±0.00 1.265±0.00 0.453±0.00 0.896±0.72 0.585±0.00 1.372±0.00 1.967±0.00 0.419±0.11 N/A 0.312±0.00
ENST00000506191 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.541±0.00 N/A
ENST00000510674 N/A N/A N/A N/A N/A 2.919±0.00 N/A N/A 1.993±0.00 N/A 18.478±0.00 N/A N/A N/A
ENST00000511430 N/A N/A N/A N/A 1.158±0.00 N/A N/A 0.533±0.00 0.143±0.00 N/A N/A 0.184±0.00 N/A N/A
ENSG00000214846 ENST00000498116 0.074±0.00 0.265±0.00 0.769±0.00 0.056±0.00 0.313±0.18 0.025±0.00 0.023±0.00 0.053±0.00 0.108±0.04 0.567±0.00 0.136±0.00 0.217±0.07 0.156±0.08 0.166±0.00
ENSG00000248188 ENST00000513715 0.080±0.00 N/A 0.410±0.00 N/A 0.743±0.00 N/A N/A N/A 0.515±0.00 N/A N/A N/A 0.037±0.00 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029082 ENSMUST00000101237 N/A N/A N/A N/A 7.519±3.62 N/A N/A 9.025±0.93 3.315±0.06 11.060±2.14 N/A N/A 11.104±0.49 N/A
ENSMUST00000118126 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000125838 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000126976 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000029084 ENSMUST00000030964 9.131±1.62 4.421±1.02 4.958±0.24 0.557±0.26 10.056±2.98 57.289±11.53 6.011±0.93 4.654±0.63 5.762±2.17 21.075±0.68 1.928±0.23 4.547±1.78 1.889±0.92 0.265±0.10
ENSMUSG00000039753 ENSMUST00000047857 18.199±2.00 32.154±4.08 19.173±1.94 16.753±2.48 17.311±3.45 18.654±2.29 9.207±2.04 19.314±3.38 11.808±3.30 23.689±3.00 10.498±2.28 16.860±5.88 19.765±5.01 27.516±0.29
ENSMUST00000087465 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000114047 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 17.240±2.84 6.804±0.71 N/A
ENSMUST00000119523 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000121736 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.102±0.00
ENSMUST00000124421 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000124610 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140469 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141902 9.427±0.85 N/A N/A N/A 5.622±1.83 N/A 3.876±0.46 N/A 2.345±0.04 5.235±0.18 N/A 7.842±2.10 N/A 7.319±0.00
ENSMUST00000143316 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000086479 ENSMUST00000123363 N/A N/A 0.020±0.00 N/A N/A 0.233±0.03 0.071±0.00 0.189±0.00 N/A 0.224±0.07 N/A 0.324±0.00 0.014±0.00 N/A
ENSMUSG00000087281 ENSMUST00000154897 0.277±0.10 0.449±0.14 0.196±0.00 N/A 0.193±0.00 0.990±0.35 0.137±0.00 0.237±0.10 0.260±0.21 0.220±0.00 0.194±0.02 0.493±0.27 0.423±0.34 5.761±1.31

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