C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00027D_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000158480-ENSG00000124226 CGP 9606 20:49903391-49953892
GeneTranscriptPositionBiotype
ENSG00000124226 (RNF114)
ring finger protein 114 		ENST00000244061 (RNF114-001) 49936348-49953892 protein_coding
ENST00000622920 (RNF114-004) 49936407-49952899 protein_coding
ENST00000622999 (RNF114-002) 49936377-49953878 nonsense_mediated_decay
ENST00000623528 (RNF114-006) 49936336-49952152 nonsense_mediated_decay
ENST00000623732 (RNF114-008) 49936399-49946178 nonsense_mediated_decay
ENST00000624620 (RNF114-007) 49936399-49941971 retained_intron
ENST00000624666 (RNF114-005) 49943931-49952300 retained_intron
ENST00000625177 (RNF114-009) 49936399-49952128 protein_coding
ENSG00000158480 (SPATA2)
spermatogenesis associated 2 		ENST00000289431 (SPATA2-001) 49903391-49915508 protein_coding
ENST00000422556 (SPATA2-201) 49903394-49913739 protein_coding
ENSG00000199490 (Y_RNA)
Y RNA 		ENST00000362620 (Y_RNA.1-239) 49920597-49920694 misc_RNA
ENSG00000269103 (Metazoa_SRP)
Metazoan signal recognition particle RNA 		ENST00000547793 (Metazoa_SRP.1-225) 49932795-49933078 misc_RNA
CIL_00027D_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000047030-ENSMUSG00000006418 CGP 10090 2:167481133-167516173
GeneTranscriptPositionBiotype
ENSMUSG00000006418 (Rnf114)
ring finger protein 114 		ENSMUST00000078050 (Rnf114-001) 167503089-167516173 protein_coding
ENSMUST00000109214 (Rnf114-002) 167492645-167516166 protein_coding
ENSMUST00000127939 (Rnf114-003) 167503446-167516164 nonsense_mediated_decay
ENSMUSG00000047030 (Spata2)
spermatogenesis associated 2 		ENSMUST00000057627 (Spata2-001) 167481133-167492887 protein_coding
ENSMUST00000109211 (Spata2-002) 167481433-167492845 protein_coding
ENSMUST00000126389 (Spata2-003) 167485355-167492872 processed_transcript
ENSMUST00000147051 (Spata2-006) 167484520-167485830 retained_intron
ENSMUST00000154770 (Spata2-004) 167485513-167492878 processed_transcript
ENSMUST00000155875 (Spata2-005) 167485406-167492845 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00027D_0001ENSG00000124226ENST00000244061ENST00000622920ENST00000622999ENST00000623528ENST00000623732ENST00000624620ENST00000624666ENST00000625177ENSG00000158480ENST00000289431ENST00000422556ENSG00000199490ENST00000362620ENSG00000269103ENST00000547793CIL_00027D_0002ENSMUSG00000006418ENSMUST00000078050ENSMUST00000109214ENSMUST00000127939ENSMUSG00000047030ENSMUST00000057627ENSMUST00000109211ENSMUST00000126389ENSMUST00000147051ENSMUST00000154770ENSMUST00000155875
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00027D_0001ENSG00000124226ENST00000244061ENST00000622920ENST00000622999ENST00000623528ENST00000624620ENST00000624666ENST00000625177ENSG00000158480ENST00000289431ENST00000422556ENSG00000199490ENST00000362620ENSG00000269103ENST00000547793CIL_00027D_0002ENSMUSG00000006418ENSMUST00000078050ENSMUST00000127939ENSMUSG00000047030ENSMUST00000057627ENSMUST00000109211
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000124226 ENST00000244061 11.277±0.00 16.951±0.00 3.390±0.00 8.464±4.07 8.340±0.01 10.855±3.45 5.942±3.96 11.147±7.05 7.762±2.78 10.813±5.46 8.051±4.85 13.294±6.95 17.100±8.90 17.326±5.15
ENST00000622920 N/A N/A N/A N/A N/A N/A 1.864±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000622999 N/A N/A N/A N/A 6.141±0.00 N/A 3.726±0.00 12.869±0.00 N/A N/A N/A 10.326±2.32 5.341±0.00 N/A
ENST00000623528 10.535±0.00 N/A N/A 9.380±5.37 N/A N/A 2.013±0.00 N/A 12.108±0.00 41.667±0.00 22.944±0.00 15.966±0.00 10.674±2.95 78.797±4.25
ENST00000623732 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000624620 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.904±0.00 N/A N/A
ENST00000624666 N/A 3.857±0.00 N/A N/A 4.309±0.00 1.550±0.00 N/A N/A 1.755±0.00 3.162±1.50 N/A 1.979±0.00 N/A N/A
ENST00000625177 11.766±0.00 N/A 6.578±0.00 N/A N/A N/A N/A 7.002±0.00 N/A N/A 7.959±0.00 N/A N/A 42.177±16.55
ENSG00000158480 ENST00000289431 1.896±0.00 2.574±0.00 0.495±0.00 5.028±1.86 1.132±0.84 1.654±0.43 1.240±0.78 1.503±1.38 0.897±0.46 1.306±0.76 2.281±2.03 5.009±1.48 3.069±0.56 10.737±1.00
ENST00000422556 N/A N/A N/A 0.777±0.00 0.324±0.00 N/A 0.386±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000199490 ENST00000362620 N/A N/A N/A 0.416±0.00 N/A N/A N/A N/A N/A N/A N/A 1.191±0.00 N/A 1.899±1.52
ENSG00000269103 ENST00000547793 0.490±0.00 1.605±0.00 N/A 0.759±0.00 0.122±0.00 0.952±0.00 0.352±0.00 1.012±0.00 0.330±0.00 0.497±0.00 0.055±0.00 0.791±0.00 N/A 0.513±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000006418 ENSMUST00000078050 13.335±1.99 11.709±1.83 12.670±2.13 29.600±4.42 18.045±3.64 20.672±2.86 14.435±0.61 17.705±2.89 16.576±3.07 20.040±1.11 5.243±0.96 17.120±6.97 10.583±6.26 9.162±3.51
ENSMUST00000109214 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000127939 23.809±3.83 34.251±2.95 20.513±2.84 18.747±5.03 36.696±7.89 26.884±3.54 21.081±8.37 27.449±2.68 17.659±6.67 38.464±3.64 8.144±1.76 26.975±6.08 13.293±5.68 11.175±2.80
ENSMUSG00000047030 ENSMUST00000057627 9.537±0.43 13.172±3.16 6.495±0.85 11.039±4.18 11.999±2.23 24.739±1.09 4.967±0.99 11.275±1.60 4.667±1.42 10.435±1.18 4.878±0.95 12.725±4.56 6.292±2.96 6.529±0.25
ENSMUST00000109211 N/A N/A N/A 9.200±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000126389 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147051 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154770 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155875 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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