C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00027F_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000040911-ENSDARG00000005034 CGP 7955 15:33724563-33864960
GeneTranscriptPositionBiotype
ENSDARG00000005034 (ispd)
isoprenoid synthase domain containing 		ENSDART00000003192 (ispd-001) 33791311-33864960 protein_coding
ENSDART00000140882 (ispd-002) 33791314-33854834 protein_coding
ENSDARG00000040911 (MEOX2)
 ENSDART00000059954 (MEOX2-001) 33724563-33754750 protein_coding
ENSDARG00000068892 (sostdc1a)
sclerostin domain containing 1a 		ENSDART00000099792 (sostdc1a-201) 33858452-33863483 protein_coding
ENSDART00000099793 (sostdc1a-001) 33858452-33863625 protein_coding
ENSDARG00000088376 (5S_rRNA)
5S ribosomal RNA 		ENSDART00000125546 (5S_rRNA.1681-201) 33832698-33832834 rRNA
CIL_00027F_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000106511-ENSG00000214960 CGP 9606 7:15611212-16421322
GeneTranscriptPositionBiotype
ENSG00000106511 (MEOX2)
mesenchyme homeobox 2 		ENST00000262041 (MEOX2-001) 15611212-15686812 protein_coding
ENSG00000214960 (ISPD)
isoprenoid synthase domain containing 		ENST00000399310 (ISPD-003) 16091192-16421322 protein_coding
ENST00000407010 (ISPD-001) 16091192-16421322 protein_coding
ENST00000479493 (ISPD-002) 16276577-16301466 processed_transcript
ENSG00000224683 (RPL36AP29)
ribosomal protein L36a pseudogene 29 		ENST00000415878 (RPL36AP29-001) 16208945-16209265 processed_pseudogene
ENSG00000225974 (AC005550.5)
 ENST00000438923 (AC005550.5-001) 15689075-15690854 lincRNA
ENSG00000229108 (MEOX2-AS1)
MEOX2 antisense RNA 1 (head to head) 		ENST00000442176 (MEOX2-AS1-001) 15688378-15695491 lincRNA
ENSG00000229379 (AC006041.1)
 ENST00000425322 (AC006041.1-001) 15841297-15842360 lincRNA
ENSG00000229688 (ISPD-AS1)
ISPD antisense RNA 1 		ENST00000436328 (ISPD-AS1-003) 16269249-16270604 antisense
ENST00000438573 (ISPD-AS1-001) 16210488-16270604 antisense
ENST00000457112 (ISPD-AS1-002) 16210544-16269247 antisense
ENST00000579293 (ISPD-AS1-005) 16210542-16248089 antisense
ENST00000582683 (ISPD-AS1-004) 16210507-16237406 antisense
ENSG00000235828 (RPL36AP26)
ribosomal protein L36a pseudogene 26 		ENST00000476382 (RPL36AP26-001) 15701435-15701752 processed_pseudogene
ENSG00000237070 (AC005550.3)
 ENST00000451240 (AC005550.3-001) 15667947-15681980 antisense
ENSG00000273477 (RP11-196O16.1)
 ENST00000609163 (RP11-196O16.1-001) 16087527-16089650 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00027F_0001ENSDARG00000005034ENSDART00000003192ENSDART00000140882ENSDARG00000040911ENSDART00000059954ENSDARG00000068892ENSDART00000099792ENSDART00000099793ENSDARG00000088376ENSDART00000125546CIL_00027F_0002ENSG00000106511ENST00000262041ENSG00000214960ENST00000399310ENST00000407010ENST00000479493ENSG00000224683ENST00000415878ENSG00000225974ENST00000438923ENSG00000229108ENST00000442176ENSG00000229379ENST00000425322ENSG00000229688ENST00000436328ENST00000438573ENST00000457112ENST00000579293ENST00000582683ENSG00000235828ENST00000476382ENSG00000237070ENST00000451240ENSG00000273477ENST00000609163
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00027F_0001ENSDARG00000005034ENSDART00000003192ENSDART00000140882ENSDARG00000040911ENSDART00000059954ENSDARG00000068892ENSDART00000099792ENSDART00000099793ENSDARG00000088376ENSDART00000125546CIL_00027F_0002ENSG00000106511ENST00000262041ENSG00000214960ENST00000399310ENST00000407010ENSG00000224683ENST00000415878ENSG00000225974ENST00000438923ENSG00000229108ENST00000442176ENSG00000229379ENST00000425322ENSG00000229688ENST00000436328ENST00000438573ENST00000457112ENST00000579293ENST00000582683ENSG00000235828ENST00000476382ENSG00000237070ENST00000451240ENSG00000273477ENST00000609163
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000005034 ENSDART00000003192 N/A N/A N/A 2.616±2.01 N/A N/A 7.524±0.00 2.131±2.00 N/A N/A N/A N/A N/A N/A
ENSDART00000140882 N/A N/A N/A 5.404±1.82 N/A N/A 5.370±3.39 N/A 0.148±0.00 N/A 2.221±0.00 N/A N/A N/A
ENSDARG00000040911 ENSDART00000059954 N/A N/A N/A 0.206±0.09 N/A N/A 0.506±0.15 0.324±0.05 0.044±0.00 N/A N/A N/A N/A N/A
ENSDARG00000068892 ENSDART00000099792 N/A N/A N/A 0.447±0.26 N/A N/A 13.243±4.81 8.649±4.44 0.073±0.00 N/A 2.162±0.00 N/A N/A N/A
ENSDART00000099793 N/A N/A N/A N/A N/A N/A N/A 0.564±0.00 N/A N/A N/A N/A N/A N/A
ENSDARG00000088376 ENSDART00000125546 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.297±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000106511 ENST00000262041 11.286±0.00 6.994±0.00 0.366±0.00 0.047±0.01 8.635±4.96 4.231±3.49 1.371±0.56 0.146±0.06 1.209±1.14 3.280±0.03 1.633±0.73 0.834±0.59 18.628±2.82 4.886±3.59
ENSG00000214960 ENST00000399310 0.158±0.00 0.177±0.00 N/A N/A N/A N/A N/A N/A 0.703±0.00 N/A 0.278±0.01 N/A N/A N/A
ENST00000407010 0.096±0.00 0.144±0.00 N/A 2.252±1.10 0.533±0.18 0.549±0.42 1.036±0.27 1.492±0.75 1.068±0.56 0.167±0.00 N/A 0.457±0.19 0.631±0.19 1.019±0.28
ENST00000479493 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000224683 ENST00000415878 N/A 0.429±0.00 N/A 0.135±0.04 N/A 0.045±0.00 0.160±0.12 N/A N/A 2.172±0.00 0.261±0.00 N/A N/A N/A
ENSG00000225974 ENST00000438923 N/A 0.259±0.00 N/A N/A N/A N/A 0.069±0.00 N/A N/A N/A N/A N/A N/A 0.033±0.00
ENSG00000229108 ENST00000442176 3.073±0.00 0.441±0.00 N/A 0.057±0.00 1.727±0.73 0.603±0.47 0.762±0.02 N/A 0.682±0.00 N/A 0.190±0.00 0.047±0.00 2.206±0.00 0.033±0.00
ENSG00000229379 ENST00000425322 N/A N/A N/A N/A N/A N/A N/A 0.253±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000229688 ENST00000436328 N/A N/A N/A 0.335±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.096±0.00 N/A
ENST00000438573 N/A 0.008±0.00 0.073±0.00 N/A N/A 0.054±0.01 0.014±0.01 N/A 0.071±0.00 N/A N/A 0.100±0.09 0.010±0.00 1.562±0.60
ENST00000457112 N/A N/A 0.082±0.00 0.041±0.00 N/A N/A 0.030±0.00 0.116±0.00 N/A N/A N/A 0.110±0.01 N/A N/A
ENST00000579293 N/A 0.095±0.00 N/A 0.101±0.07 N/A N/A N/A N/A N/A N/A N/A 0.141±0.00 N/A N/A
ENST00000582683 N/A 0.055±0.00 N/A N/A N/A 0.092±0.00 N/A 0.038±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000235828 ENST00000476382 0.438±0.00 0.718±0.00 N/A 0.315±0.00 0.778±0.00 1.733±0.00 0.047±0.00 0.617±0.00 0.471±0.00 1.618±0.00 1.568±0.00 0.414±0.22 0.361±0.00 0.502±0.00
ENSG00000237070 ENST00000451240 0.098±0.00 0.140±0.00 N/A 0.037±0.00 0.053±0.00 0.063±0.00 0.018±0.00 N/A N/A 0.330±0.17 0.028±0.02 0.009±0.01 0.046±0.01 0.028±0.01
ENSG00000273477 ENST00000609163 0.113±0.00 0.312±0.00 0.104±0.00 0.734±0.18 0.187±0.12 0.246±0.13 0.493±0.29 0.633±0.00 0.208±0.04 0.101±0.07 0.144±0.00 0.403±0.24 0.434±0.31 0.434±0.07

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