C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000281_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000056178-ENSDARG00000013144 CGP 7955 6:28897933-28941283
GeneTranscriptPositionBiotype
ENSDARG00000013144 (atp1b1a)
ATPase, Na+/K+ transporting, beta 1a polypeptide 		ENSDART00000006386 (atp1b1a-001) 28931188-28941283 protein_coding
ENSDART00000127637 (atp1b1a-201) 28931335-28941282 protein_coding
ENSDART00000139368 (atp1b1a-002) 28936437-28937479 processed_transcript
ENSDARG00000056178 (dpt)
dermatopontin 		ENSDART00000078625 (dpt-001) 28897933-28909438 protein_coding
CIL_000281_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000143196-ENSG00000143153 CGP 9606 1:168695459-169132722
GeneTranscriptPositionBiotype
ENSG00000143153 (ATP1B1)
ATPase, Na+/K+ transporting, beta 1 polypeptide 		ENST00000367815 (ATP1B1-001) 169106323-169132019 protein_coding
ENST00000367816 (ATP1B1-002) 169105697-169132722 protein_coding
ENST00000494797 (ATP1B1-003) 169107907-169127399 protein_coding
ENSG00000143156 (NME7)
NME/NM23 family member 7 		ENST00000367811 (NME7-001) 169132531-169367967 protein_coding
ENST00000469474 (NME7-007) 169287205-169324450 processed_transcript
ENST00000472647 (NME7-002) 169132531-169367946 protein_coding
ENST00000472984 (NME7-009) 169298578-169303452 retained_intron
ENST00000480478 (NME7-005) 169230752-169367797 processed_transcript
ENST00000483228 (NME7-016) 169169521-169310071 processed_transcript
ENST00000485609 (NME7-003) 169298556-169367948 processed_transcript
ENST00000491225 (NME7-004) 169298605-169367797 processed_transcript
ENST00000493481 (NME7-008) 169132531-169230732 processed_transcript
ENST00000524967 (NME7-011) 169283821-169367772 retained_intron
ENST00000525440 (NME7-010) 169132537-169367946 nonsense_mediated_decay
ENST00000527460 (NME7-013) 169303100-169367782 retained_intron
ENST00000528517 (NME7-012) 169230714-169367730 nonsense_mediated_decay
ENST00000530739 (NME7-015) 169132531-169190710 processed_transcript
ENSG00000143196 (DPT)
dermatopontin 		ENST00000367817 (DPT-001) 168695459-168729264 protein_coding
ENSG00000203601 (LINC00970)
long intergenic non-protein coding RNA 970 		ENST00000366408 (LINC00970-001) 168903905-169087005 antisense
ENSG00000213063 (RPL29P7)
ribosomal protein L29 pseudogene 7 		ENST00000440227 (RPL29P7-001) 168938467-168938923 processed_pseudogene
ENSG00000225826 (LINC00626)
long intergenic non-protein coding RNA 626 		ENST00000420691 (LINC00626-001) 168786939-168792886 lincRNA
ENSG00000229612 (SUMO1P2)
SUMO1 pseudogene 2 		ENST00000452524 (SUMO1P2-001) 168898136-168898439 processed_pseudogene
ENSG00000235736 (RP1-10C16.1)
 ENST00000457405 (RP1-10C16.1-001) 168763365-168774490 lincRNA
ENSG00000237707 (RP5-1018K9.1)
 ENST00000415637 (RP5-1018K9.1-001) 169104124-169104907 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000281_0001ENSDARG00000013144ENSDART00000006386ENSDART00000127637ENSDART00000139368ENSDARG00000056178ENSDART00000078625CIL_000281_0002ENSG00000143153ENST00000367815ENST00000367816ENST00000494797ENSG00000143156ENST00000367811ENST00000469474ENST00000472647ENST00000472984ENST00000480478ENST00000483228ENST00000485609ENST00000491225ENST00000493481ENST00000524967ENST00000525440ENST00000527460ENST00000528517ENST00000530739ENSG00000143196ENST00000367817ENSG00000203601ENST00000366408ENSG00000213063ENST00000440227ENSG00000225826ENST00000420691ENSG00000229612ENST00000452524ENSG00000235736ENST00000457405ENSG00000237707ENST00000415637
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000281_0001ENSDARG00000013144ENSDART00000006386ENSDART00000127637ENSDARG00000056178ENSDART00000078625CIL_000281_0002ENSG00000143153ENST00000367815ENST00000367816ENST00000494797ENSG00000143156ENST00000367811ENST00000472647ENST00000530739ENSG00000143196ENST00000367817ENSG00000203601ENST00000366408ENSG00000213063ENST00000440227ENSG00000225826ENST00000420691ENSG00000229612ENST00000452524ENSG00000235736ENST00000457405ENSG00000237707ENST00000415637
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000013144 ENSDART00000006386 N/A N/A N/A 25.254±5.05 N/A N/A 306.021±10.14 281.155±0.00 25.053±0.00 N/A 69.419±0.00 N/A N/A N/A
ENSDART00000127637 N/A N/A N/A 9.143±2.02 N/A N/A 200.636±150.97 140.837±106.37 7.738±0.00 N/A 32.297±0.00 N/A N/A N/A
ENSDART00000139368 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000056178 ENSDART00000078625 N/A N/A N/A 0.193±0.16 N/A N/A 23.407±9.56 3.855±2.07 N/A N/A 5.010±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000143153 ENST00000367815 1.572±0.00 N/A N/A N/A N/A N/A 61.090±0.00 N/A N/A 17.525±0.00 131.132±0.00 38.788±25.12 8.012±3.09 26.405±0.00
ENST00000367816 2.401±0.00 4.292±0.00 163.569±0.00 44.903±0.00 30.854±0.00 46.749±0.00 31.249±11.35 N/A 3.476±0.00 N/A 89.174±0.00 57.716±26.99 7.894±2.76 20.806±0.00
ENST00000494797 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 96.064±0.00 14.064±0.00 N/A
ENSG00000143156 ENST00000367811 2.962±0.00 4.766±0.00 N/A N/A N/A N/A N/A N/A N/A 4.401±0.00 N/A 13.636±0.00 1.681±0.00 16.847±0.00
ENST00000469474 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472647 N/A N/A N/A N/A 5.361±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472984 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480478 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483228 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485609 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491225 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493481 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000524967 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000525440 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000527460 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000528517 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000530739 N/A N/A N/A N/A N/A N/A N/A N/A 49.900±0.00 N/A N/A N/A N/A N/A
ENSG00000143196 ENST00000367817 89.677±0.00 83.053±0.00 0.465±0.00 0.562±0.00 189.665±172.95 142.402±126.59 16.373±7.65 4.624±1.47 16.020±13.08 20.581±12.95 5.716±3.01 7.407±5.57 14.972±5.56 48.053±16.17
ENSG00000203601 ENST00000366408 0.239±0.00 0.240±0.00 1.382±0.00 0.321±0.24 0.181±0.00 0.090±0.05 0.378±0.00 0.461±0.00 0.341±0.00 0.433±0.00 0.108±0.00 0.098±0.05 0.098±0.00 0.236±0.04
ENSG00000213063 ENST00000440227 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.041±0.00 0.036±0.00 N/A N/A 1.422±0.00
ENSG00000225826 ENST00000420691 0.013±0.00 0.026±0.00 0.202±0.00 0.076±0.06 0.076±0.00 N/A 0.048±0.00 0.294±0.00 N/A 0.445±0.00 N/A 0.032±0.00 N/A 0.068±0.01
ENSG00000229612 ENST00000452524 0.035±0.00 N/A N/A N/A 0.035±0.00 0.032±0.00 N/A 0.071±0.00 N/A N/A N/A N/A N/A 0.032±0.00
ENSG00000235736 ENST00000457405 0.234±0.00 N/A N/A 0.321±0.11 0.170±0.00 N/A N/A 0.338±0.00 N/A 0.121±0.00 N/A 0.083±0.00 N/A 0.094±0.00
ENSG00000237707 ENST00000415637 N/A N/A 0.688±0.00 0.090±0.00 N/A 0.719±0.00 N/A 6.913±0.00 N/A N/A N/A 0.212±0.00 N/A 0.158±0.00

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