C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00028U_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000043797-ENSDARG00000002776 CGP 7955 17:4828949-5166425
GeneTranscriptPositionBiotype
ENSDARG00000002776 (supt3h)
suppressor of Ty 3 homolog (S. cerevisiae) 		ENSDART00000026904 (supt3h-201) 4951306-4998460 protein_coding
ENSDART00000141251 (supt3h-002) 4963581-5095174 protein_coding
ENSDART00000141598 (supt3h-001) 4963581-5166425 protein_coding
ENSDART00000143104 (supt3h-003) 4985590-5038811 processed_transcript
ENSDARG00000043797 (cdc5l)
CDC5 cell division cycle 5-like (S. pombe) 		ENSDART00000064313 (cdc5l-001) 4828949-4873736 protein_coding
ENSDART00000121806 (cdc5l-201) 4829108-4873512 protein_coding
CIL_00028U_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000096401-ENSG00000196284 CGP 9606 6:44387525-45377953
GeneTranscriptPositionBiotype
ENSG00000096401 (CDC5L)
cell division cycle 5-like 		ENST00000371477 (CDC5L-001) 44387525-44450426 protein_coding
ENSG00000124813 (RUNX2)
runt-related transcription factor 2 		ENST00000359524 (RUNX2-001) 45422485-45551079 protein_coding
ENST00000371432 (RUNX2-201) 45328317-45551082 protein_coding
ENST00000371436 (RUNX2-004) 45328727-45547393 protein_coding
ENST00000371438 (RUNX2-003) 45328369-45551079 protein_coding
ENST00000465038 (RUNX2-002) 45328323-45547305 protein_coding
ENST00000473041 (RUNX2-006) 45361573-45372055 processed_transcript
ENST00000478660 (RUNX2-009) 45422036-45663872 nonsense_mediated_decay
ENST00000483243 (RUNX2-005) 45328323-45372055 processed_transcript
ENST00000483377 (RUNX2-007) 45328157-45547209 nonsense_mediated_decay
ENST00000576263 (RUNX2-008) 45328727-45664349 protein_coding
ENSG00000196284 (SUPT3H)
suppressor of Ty 3 homolog (S. cerevisiae) 		ENST00000306867 (SUPT3H-201) 44826730-45106015 protein_coding
ENST00000371458 (SUPT3H-004) 44829767-44955510 protein_coding
ENST00000371459 (SUPT3H-006) 44828845-45377933 protein_coding
ENST00000371460 (SUPT3H-005) 44828732-45377933 protein_coding
ENST00000459689 (SUPT3H-003) 45250955-45377423 processed_transcript
ENST00000475057 (SUPT3H-001) 44809317-45377953 nonsense_mediated_decay
ENSG00000219384 (RP11-491H9.3)
 ENST00000405824 (RP11-491H9.3-001) 45158870-45159511 processed_pseudogene
ENSG00000237530 (RP3-449H6.1)
 ENST00000436113 (RP3-449H6.1-001) 44525259-44526754 lincRNA
ENSG00000270900 (NUDT19P4)
nudix (nucleoside diphosphate linked moiety X)-type motif 19 pseudogene 4 		ENST00000605501 (NUDT19P4-001) 44898711-44899295 processed_pseudogene
ENSG00000276156 (RP11-491H9.4)
 ENST00000616214 (RP11-491H9.4-001) 45097496-45097976 unprocessed_pseudogene
ENSG00000277769 (RBM22P4)
RNA binding motif protein 22 pseudogene 4 		ENST00000613117 (RBM22P4-001) 45098021-45099260 processed_pseudogene
ENSG00000279076 (RP3-449H6.2)
 ENST00000624717 (RP3-449H6.2-001) 44551577-44553281 TEC

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00028U_0001ENSDARG00000002776ENSDART00000026904ENSDART00000141251ENSDART00000141598ENSDART00000143104ENSDARG00000043797ENSDART00000064313ENSDART00000121806CIL_00028U_0002ENSG00000096401ENST00000371477ENSG00000124813ENST00000359524ENST00000371432ENST00000371436ENST00000371438ENST00000465038ENST00000473041ENST00000478660ENST00000483243ENST00000483377ENST00000576263ENSG00000196284ENST00000306867ENST00000371458ENST00000371459ENST00000371460ENST00000459689ENST00000475057ENSG00000219384ENST00000405824ENSG00000237530ENST00000436113ENSG00000270900ENST00000605501ENSG00000276156ENST00000616214ENSG00000277769ENST00000613117ENSG00000279076ENST00000624717
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00028U_0001ENSDARG00000002776ENSDART00000026904ENSDART00000141598ENSDARG00000043797ENSDART00000064313CIL_00028U_0002ENSG00000096401ENST00000371477ENSG00000124813ENST00000359524ENST00000371432ENST00000371436ENST00000371438ENST00000465038ENST00000478660ENST00000483243ENST00000576263ENSG00000196284ENST00000306867ENST00000371458ENST00000371459ENST00000371460ENST00000475057ENSG00000219384ENST00000405824ENSG00000237530ENST00000436113ENSG00000270900ENST00000605501ENSG00000276156ENST00000616214ENSG00000277769ENST00000613117ENSG00000279076ENST00000624717
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000002776 ENSDART00000026904 N/A N/A N/A 4.195±0.00 N/A N/A 5.628±0.00 3.016±0.00 1.126±0.00 N/A N/A N/A N/A N/A
ENSDART00000141251 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000141598 N/A N/A N/A 1.958±0.41 N/A N/A 4.552±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000143104 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000043797 ENSDART00000064313 N/A N/A N/A 16.327±9.67 N/A N/A 16.281±0.57 9.876±9.30 2.794±0.00 N/A 6.586±0.00 N/A N/A N/A
ENSDART00000121806 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000096401 ENST00000371477 5.196±0.00 4.738±0.00 0.947±0.00 4.271±0.72 4.161±0.36 3.987±2.05 3.110±1.24 4.536±0.17 3.860±1.62 4.256±0.82 4.875±2.84 4.423±0.42 4.037±2.37 10.041±0.60
ENSG00000124813 ENST00000359524 0.458±0.00 0.436±0.00 N/A 0.348±0.00 0.515±0.00 0.495±0.00 N/A 0.376±0.27 0.159±0.00 0.692±0.09 N/A 0.299±0.10 0.152±0.05 N/A
ENST00000371432 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.458±0.00 N/A 0.807±0.55 0.131±0.00 0.215±0.12
ENST00000371436 N/A N/A 0.222±0.00 0.486±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000371438 N/A N/A N/A N/A N/A 0.304±0.00 N/A N/A N/A N/A N/A 0.244±0.00 N/A N/A
ENST00000465038 N/A N/A N/A N/A N/A N/A 0.129±0.00 N/A N/A N/A N/A N/A N/A 0.571±0.00
ENST00000473041 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478660 N/A N/A N/A N/A N/A N/A N/A N/A 0.478±0.00 N/A N/A N/A N/A 0.393±0.00
ENST00000483243 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.928±0.00
ENST00000483377 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000576263 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.197±0.00 N/A N/A N/A
ENSG00000196284 ENST00000306867 N/A N/A N/A N/A N/A 0.307±0.00 N/A N/A 0.070±0.00 N/A N/A 0.558±0.00 N/A N/A
ENST00000371458 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.498±0.00 N/A N/A N/A
ENST00000371459 N/A 0.362±0.00 N/A 0.402±0.00 0.388±0.10 0.700±0.24 0.119±0.00 0.779±0.00 0.089±0.00 0.506±0.17 N/A 0.783±0.29 1.183±0.40 2.609±0.31
ENST00000371460 0.160±0.00 N/A 0.878±0.00 N/A N/A N/A 0.067±0.00 N/A 0.631±0.00 N/A N/A 0.579±0.00 0.512±0.00 N/A
ENST00000459689 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475057 1.766±0.00 0.873±0.00 0.410±0.00 4.624±3.40 1.742±0.24 3.794±0.00 0.214±0.02 2.325±0.00 0.660±0.43 1.050±0.07 0.860±0.00 2.129±2.37 1.349±0.18 5.050±0.00
ENSG00000219384 ENST00000405824 N/A N/A N/A N/A N/A N/A 0.189±0.00 0.089±0.00 N/A 1.566±0.00 N/A 0.113±0.00 N/A 0.589±0.00
ENSG00000237530 ENST00000436113 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.210±0.03
ENSG00000270900 ENST00000605501 N/A N/A N/A N/A 0.202±0.00 N/A N/A N/A N/A N/A N/A 0.394±0.00 N/A N/A
ENSG00000276156 ENST00000616214 N/A N/A N/A N/A 0.224±0.00 N/A N/A 0.111±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000277769 ENST00000613117 0.010±0.00 N/A 0.179±0.00 0.129±0.12 0.059±0.00 N/A 0.031±0.02 N/A 0.310±0.00 0.948±0.00 N/A 0.172±0.25 N/A 0.022±0.00
ENSG00000279076 ENST00000624717 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.298±0.28

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