C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Region Summary |
| CIL_00029D_0001 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSDARG00000086415-ENSDARG00000030417 | CGP | 7955 | 1:54750009-54941279  |
|
| Gene | Transcript | Position | Biotype | |
ENSDARG00000030417  (PKD1)polycystic kidney disease 1 (autosomal dominant) |
ENSDART00000039911 (PKD1-201)
|
54829728-54941279 | protein_coding | |
|
ENSDARG00000086415 (tsc2) tuberous sclerosis 2 |
ENSDART00000122071 (tsc2-201)
|
54750009-54821473 | protein_coding | |
| CIL_00029D_0002 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSG00000103197-ENSG00000008710 | CGP | 9606 | 16:2047465-2135898 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSG00000008710 (PKD1) polycystic kidney disease 1 (autosomal dominant) |
ENST00000262304 (PKD1-001)
|
2088710-2135898 | protein_coding | |
|
ENST00000415938 (PKD1-043)
|
2097728-2112963 | retained_intron | ||
|
ENST00000423118 (PKD1-002)
|
2088710-2135898 | protein_coding | ||
|
ENST00000468674 (PKD1-012)
|
2109291-2113280 | processed_transcript | ||
|
ENST00000469241 (PKD1-014)
|
2111458-2112898 | retained_intron | ||
|
ENST00000469851 (PKD1-021)
|
2099932-2100686 | retained_intron | ||
|
ENST00000471603 (PKD1-009)
|
2098833-2103687 | retained_intron | ||
|
ENST00000472577 (PKD1-023)
|
2089527-2090839 | retained_intron | ||
|
ENST00000472659 (PKD1-024)
|
2092886-2094146 | retained_intron | ||
|
ENST00000473780 (PKD1-016)
|
2107585-2108548 | processed_transcript | ||
|
ENST00000474088 (PKD1-019)
|
2101951-2103177 | retained_intron | ||
|
ENST00000475889 (PKD1-018)
|
2102380-2103531 | processed_transcript | ||
|
ENST00000480227 (PKD1-008)
|
2099078-2103793 | retained_intron | ||
|
ENST00000483024 (PKD1-015)
|
2106590-2112830 | protein_coding | ||
|
ENST00000483558 (PKD1-017)
|
2106276-2107756 | processed_transcript | ||
|
ENST00000483731 (PKD1-010)
|
2097728-2114124 | retained_intron | ||
|
ENST00000483814 (PKD1-020)
|
2100023-2100765 | retained_intron | ||
|
ENST00000485120 (PKD1-022)
|
2091428-2092597 | retained_intron | ||
|
ENST00000486339 (PKD1-005)
|
2097728-2107759 | retained_intron | ||
|
ENST00000487932 (PKD1-007)
|
2090985-2109853 | nonsense_mediated_decay | ||
|
ENST00000488185 (PKD1-011)
|
2106941-2118078 | protein_coding | ||
|
ENST00000496574 (PKD1-004)
|
2097852-2108016 | retained_intron | ||
|
ENST00000561668 (PKD1-040)
|
2090883-2092170 | nonsense_mediated_decay | ||
|
ENST00000561991 (PKD1-027)
|
2103517-2106408 | processed_transcript | ||
|
ENST00000562297 (PKD1-029)
|
2097728-2103789 | retained_intron | ||
|
ENST00000562425 (PKD1-037)
|
2091823-2093884 | nonsense_mediated_decay | ||
|
ENST00000564313 (PKD1-041)
|
2090765-2092013 | retained_intron | ||
|
ENST00000564865 (PKD1-033)
|
2105357-2106104 | processed_transcript | ||
|
ENST00000564890 (PKD1-032)
|
2105378-2106407 | retained_intron | ||
|
ENST00000565639 (PKD1-044)
|
2103789-2114481 | retained_intron | ||
|
ENST00000566784 (PKD1-042)
|
2097859-2099893 | processed_transcript | ||
|
ENST00000566905 (PKD1-034)
|
2097752-2100453 | processed_transcript | ||
|
ENST00000567355 (PKD1-039)
|
2092046-2092911 | retained_intron | ||
|
ENST00000567946 (PKD1-028)
|
2097728-2105398 | protein_coding | ||
|
ENST00000568591 (PKD1-025)
|
2106503-2117959 | nonsense_mediated_decay | ||
|
ENST00000568796 (PKD1-038)
|
2093355-2093873 | retained_intron | ||
|
ENST00000569983 (PKD1-031)
|
2106521-2113074 | retained_intron | ||
|
ENST00000570150 (PKD1-030)
|
2116592-2118124 | processed_transcript | ||
|
ENST00000570193 (PKD1-035)
|
2099462-2100407 | processed_transcript | ||
|
ENST00000570253 (PKD1-036)
|
2097728-2100300 | retained_intron | ||
|
ENSG00000065057 (NTHL1) nth endonuclease III-like 1 (E. coli) |
ENST00000219066 (NTHL1-001)
|
2039815-2047866 | protein_coding | |
|
ENST00000561841 (NTHL1-007)
|
2039852-2047743 | nonsense_mediated_decay | ||
|
ENST00000561862 (NTHL1-010)
|
2039820-2040468 | retained_intron | ||
|
ENST00000562120 (NTHL1-005)
|
2043484-2046214 | retained_intron | ||
|
ENST00000562951 (NTHL1-006)
|
2039821-2044079 | processed_transcript | ||
|
ENST00000565406 (NTHL1-008)
|
2039820-2044826 | retained_intron | ||
|
ENST00000566380 (NTHL1-003)
|
2039820-2047786 | protein_coding | ||
|
ENST00000567727 (NTHL1-009)
|
2039823-2043803 | retained_intron | ||
|
ENST00000568513 (NTHL1-004)
|
2039821-2047794 | nonsense_mediated_decay | ||
|
ENST00000623977 (NTHL1-002)
|
2046937-2047847 | TEC | ||
|
ENSG00000103197 (TSC2) tuberous sclerosis 2 |
ENST00000219476 (TSC2-001)
|
2047465-2088712 | protein_coding | |
|
ENST00000350773 (TSC2-004)
|
2048020-2088712 | protein_coding | ||
|
ENST00000382538 (TSC2-007)
|
2047980-2088700 | protein_coding | ||
|
ENST00000401874 (TSC2-003)
|
2047989-2088702 | protein_coding | ||
|
ENST00000432909 (TSC2-020)
|
2053433-2055520 | protein_coding | ||
|
ENST00000439117 (TSC2-002)
|
2048033-2088703 | nonsense_mediated_decay | ||
|
ENST00000439673 (TSC2-017)
|
2048014-2088701 | protein_coding | ||
|
ENST00000461648 (TSC2-008)
|
2047990-2054082 | retained_intron | ||
|
ENST00000463601 (TSC2-010)
|
2061589-2063047 | retained_intron | ||
|
ENST00000463808 (TSC2-013)
|
2072595-2074652 | retained_intron | ||
|
ENST00000467949 (TSC2-009)
|
2056161-2063046 | protein_coding | ||
|
ENST00000471143 (TSC2-014)
|
2076158-2079623 | nonsense_mediated_decay | ||
|
ENST00000483020 (TSC2-015)
|
2076147-2079595 | nonsense_mediated_decay | ||
|
ENST00000488675 (TSC2-012)
|
2065413-2071897 | retained_intron | ||
|
ENST00000490108 (TSC2-011)
|
2062838-2065628 | retained_intron | ||
|
ENST00000497886 (TSC2-005)
|
2078239-2088711 | retained_intron | ||
|
ENST00000561695 (TSC2-025)
|
2078920-2079602 | retained_intron | ||
|
ENST00000562474 (TSC2-027)
|
2066229-2071534 | processed_transcript | ||
|
ENST00000563346 (TSC2-023)
|
2071769-2074328 | retained_intron | ||
|
ENST00000568238 (TSC2-022)
|
2064071-2065583 | retained_intron | ||
|
ENST00000568366 (TSC2-024)
|
2077404-2080177 | processed_transcript | ||
|
ENST00000568454 (TSC2-006)
|
2048202-2088720 | protein_coding | ||
|
ENST00000568566 (TSC2-021)
|
2062518-2071572 | nonsense_mediated_decay | ||
|
ENST00000568692 (TSC2-026)
|
2054296-2055892 | retained_intron | ||
|
ENST00000569110 (TSC2-019)
|
2083190-2088691 | protein_coding | ||
|
ENST00000569930 (TSC2-016)
|
2082697-2088692 | retained_intron | ||
|
ENSG00000200059 (Y_RNA) Y RNA |
ENST00000363189 (Y_RNA.1-306)
|
2131851-2131950 | misc_RNA | |
|
ENSG00000221656 (MIR1225) microRNA 1225 |
ENST00000408729 (MIR1225-201)
|
2090195-2090284 | miRNA | |
|
ENSG00000265867 (MIR4516) microRNA 4516 |
ENST00000583451 (MIR4516-201)
|
2133119-2133204 | miRNA | |
Expression Patterns
|
