C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00029D_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000086415-ENSDARG00000030417 CGP 7955 1:54750009-54941279
GeneTranscriptPositionBiotype
ENSDARG00000030417 (PKD1)
polycystic kidney disease 1 (autosomal dominant) 		ENSDART00000039911 (PKD1-201) 54829728-54941279 protein_coding
ENSDARG00000086415 (tsc2)
tuberous sclerosis 2 		ENSDART00000122071 (tsc2-201) 54750009-54821473 protein_coding

Danio rerio Ensembl (Zv9)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_00029D_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000103197-ENSG00000008710 CGP 9606 16:2047465-2135898
GeneTranscriptPositionBiotype
ENSG00000008710 (PKD1)
polycystic kidney disease 1 (autosomal dominant) 		ENST00000262304 (PKD1-001) 2088710-2135898 protein_coding
ENST00000415938 (PKD1-043) 2097728-2112963 retained_intron
ENST00000423118 (PKD1-002) 2088710-2135898 protein_coding
ENST00000468674 (PKD1-012) 2109291-2113280 processed_transcript
ENST00000469241 (PKD1-014) 2111458-2112898 retained_intron
ENST00000469851 (PKD1-021) 2099932-2100686 retained_intron
ENST00000471603 (PKD1-009) 2098833-2103687 retained_intron
ENST00000472577 (PKD1-023) 2089527-2090839 retained_intron
ENST00000472659 (PKD1-024) 2092886-2094146 retained_intron
ENST00000473780 (PKD1-016) 2107585-2108548 processed_transcript
ENST00000474088 (PKD1-019) 2101951-2103177 retained_intron
ENST00000475889 (PKD1-018) 2102380-2103531 processed_transcript
ENST00000480227 (PKD1-008) 2099078-2103793 retained_intron
ENST00000483024 (PKD1-015) 2106590-2112830 protein_coding
ENST00000483558 (PKD1-017) 2106276-2107756 processed_transcript
ENST00000483731 (PKD1-010) 2097728-2114124 retained_intron
ENST00000483814 (PKD1-020) 2100023-2100765 retained_intron
ENST00000485120 (PKD1-022) 2091428-2092597 retained_intron
ENST00000486339 (PKD1-005) 2097728-2107759 retained_intron
ENST00000487932 (PKD1-007) 2090985-2109853 nonsense_mediated_decay
ENST00000488185 (PKD1-011) 2106941-2118078 protein_coding
ENST00000496574 (PKD1-004) 2097852-2108016 retained_intron
ENST00000561668 (PKD1-040) 2090883-2092170 nonsense_mediated_decay
ENST00000561991 (PKD1-027) 2103517-2106408 processed_transcript
ENST00000562297 (PKD1-029) 2097728-2103789 retained_intron
ENST00000562425 (PKD1-037) 2091823-2093884 nonsense_mediated_decay
ENST00000564313 (PKD1-041) 2090765-2092013 retained_intron
ENST00000564865 (PKD1-033) 2105357-2106104 processed_transcript
ENST00000564890 (PKD1-032) 2105378-2106407 retained_intron
ENST00000565639 (PKD1-044) 2103789-2114481 retained_intron
ENST00000566784 (PKD1-042) 2097859-2099893 processed_transcript
ENST00000566905 (PKD1-034) 2097752-2100453 processed_transcript
ENST00000567355 (PKD1-039) 2092046-2092911 retained_intron
ENST00000567946 (PKD1-028) 2097728-2105398 protein_coding
ENST00000568591 (PKD1-025) 2106503-2117959 nonsense_mediated_decay
ENST00000568796 (PKD1-038) 2093355-2093873 retained_intron
ENST00000569983 (PKD1-031) 2106521-2113074 retained_intron
ENST00000570150 (PKD1-030) 2116592-2118124 processed_transcript
ENST00000570193 (PKD1-035) 2099462-2100407 processed_transcript
ENST00000570253 (PKD1-036) 2097728-2100300 retained_intron
ENSG00000065057 (NTHL1)
nth endonuclease III-like 1 (E. coli) 		ENST00000219066 (NTHL1-001) 2039815-2047866 protein_coding
ENST00000561841 (NTHL1-007) 2039852-2047743 nonsense_mediated_decay
ENST00000561862 (NTHL1-010) 2039820-2040468 retained_intron
ENST00000562120 (NTHL1-005) 2043484-2046214 retained_intron
ENST00000562951 (NTHL1-006) 2039821-2044079 processed_transcript
ENST00000565406 (NTHL1-008) 2039820-2044826 retained_intron
ENST00000566380 (NTHL1-003) 2039820-2047786 protein_coding
ENST00000567727 (NTHL1-009) 2039823-2043803 retained_intron
ENST00000568513 (NTHL1-004) 2039821-2047794 nonsense_mediated_decay
ENST00000623977 (NTHL1-002) 2046937-2047847 TEC
ENSG00000103197 (TSC2)
tuberous sclerosis 2 		ENST00000219476 (TSC2-001) 2047465-2088712 protein_coding
ENST00000350773 (TSC2-004) 2048020-2088712 protein_coding
ENST00000382538 (TSC2-007) 2047980-2088700 protein_coding
ENST00000401874 (TSC2-003) 2047989-2088702 protein_coding
ENST00000432909 (TSC2-020) 2053433-2055520 protein_coding
ENST00000439117 (TSC2-002) 2048033-2088703 nonsense_mediated_decay
ENST00000439673 (TSC2-017) 2048014-2088701 protein_coding
ENST00000461648 (TSC2-008) 2047990-2054082 retained_intron
ENST00000463601 (TSC2-010) 2061589-2063047 retained_intron
ENST00000463808 (TSC2-013) 2072595-2074652 retained_intron
ENST00000467949 (TSC2-009) 2056161-2063046 protein_coding
ENST00000471143 (TSC2-014) 2076158-2079623 nonsense_mediated_decay
ENST00000483020 (TSC2-015) 2076147-2079595 nonsense_mediated_decay
ENST00000488675 (TSC2-012) 2065413-2071897 retained_intron
ENST00000490108 (TSC2-011) 2062838-2065628 retained_intron
ENST00000497886 (TSC2-005) 2078239-2088711 retained_intron
ENST00000561695 (TSC2-025) 2078920-2079602 retained_intron
ENST00000562474 (TSC2-027) 2066229-2071534 processed_transcript
ENST00000563346 (TSC2-023) 2071769-2074328 retained_intron
ENST00000568238 (TSC2-022) 2064071-2065583 retained_intron
ENST00000568366 (TSC2-024) 2077404-2080177 processed_transcript
ENST00000568454 (TSC2-006) 2048202-2088720 protein_coding
ENST00000568566 (TSC2-021) 2062518-2071572 nonsense_mediated_decay
ENST00000568692 (TSC2-026) 2054296-2055892 retained_intron
ENST00000569110 (TSC2-019) 2083190-2088691 protein_coding
ENST00000569930 (TSC2-016) 2082697-2088692 retained_intron
ENSG00000200059 (Y_RNA)
Y RNA 		ENST00000363189 (Y_RNA.1-306) 2131851-2131950 misc_RNA
ENSG00000221656 (MIR1225)
microRNA 1225 		ENST00000408729 (MIR1225-201) 2090195-2090284 miRNA
ENSG00000265867 (MIR4516)
microRNA 4516 		ENST00000583451 (MIR4516-201) 2133119-2133204 miRNA

Homo sapiens Ensembl (GRCh38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00029D_0001ENSDARG00000030417ENSDART00000039911ENSDARG00000086415ENSDART00000122071CIL_00029D_0002ENSG00000008710ENST00000262304ENST00000415938ENST00000423118ENST00000468674ENST00000469241ENST00000469851ENST00000471603ENST00000472577ENST00000472659ENST00000473780ENST00000474088ENST00000475889ENST00000480227ENST00000483024ENST00000483558ENST00000483731ENST00000483814ENST00000485120ENST00000486339ENST00000487932ENST00000488185ENST00000496574ENST00000561668ENST00000561991ENST00000562297ENST00000562425ENST00000564313ENST00000564865ENST00000564890ENST00000565639ENST00000566784ENST00000566905ENST00000567355ENST00000567946ENST00000568591ENST00000568796ENST00000569983ENST00000570150ENST00000570193ENST00000570253ENSG00000065057ENST00000219066ENST00000561841ENST00000561862ENST00000562120ENST00000562951ENST00000565406ENST00000566380ENST00000567727ENST00000568513ENST00000623977ENSG00000103197ENST00000219476ENST00000350773ENST00000382538ENST00000401874ENST00000432909ENST00000439117ENST00000439673ENST00000461648ENST00000463601ENST00000463808ENST00000467949ENST00000471143ENST00000483020ENST00000488675ENST00000490108ENST00000497886ENST00000561695ENST00000562474ENST00000563346ENST00000568238ENST00000568366ENST00000568454ENST00000568566ENST00000568692ENST00000569110ENST00000569930ENSG00000200059ENST00000363189ENSG00000221656ENST00000408729ENSG00000265867ENST00000583451
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00029D_0001ENSDARG00000030417ENSDART00000039911ENSDARG00000086415ENSDART00000122071CIL_00029D_0002ENSG00000008710ENST00000262304ENST00000423118ENSG00000065057ENST00000219066ENSG00000103197ENST00000219476ENST00000382538ENST00000401874ENST00000439117ENST00000439673ENST00000461648ENST00000568454ENST00000569110ENSG00000200059ENST00000363189ENSG00000221656ENST00000408729ENSG00000265867ENST00000583451
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000030417 ENSDART00000039911 N/A N/A N/A 0.107±0.04 N/A N/A 0.263±0.16 N/A 0.026±0.00 N/A N/A N/A N/A N/A
ENSDARG00000086415 ENSDART00000122071 N/A N/A N/A 2.890±1.09 N/A N/A N/A 0.169±0.16 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000008710 ENST00000262304 2.125±0.00 4.755±0.00 1.047±0.00 3.674±1.33 2.768±1.24 1.477±0.00 1.687±1.02 N/A 1.478±0.00 N/A 1.594±0.00 9.236±7.88 2.614±0.39 N/A
ENST00000415938 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000423118 2.064±0.00 5.461±0.00 N/A 4.664±0.00 3.715±0.00 3.443±0.00 2.862±0.00 0.693±0.00 N/A 0.516±0.00 5.898±3.66 N/A 2.148±0.00 N/A
ENST00000468674 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000469241 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000469851 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000471603 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472577 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472659 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000473780 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474088 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475889 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480227 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483024 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483558 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483731 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483814 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485120 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486339 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487932 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488185 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496574 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561668 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561991 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000562297 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000562425 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564313 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564865 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564890 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565639 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566784 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566905 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567355 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567946 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568591 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568796 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569983 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000570150 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000570193 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000570253 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000065057 ENST00000219066 N/A N/A N/A N/A N/A N/A N/A 3.741±0.00 N/A N/A N/A 107.955±0.00 27.786±0.00 N/A
ENST00000561841 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561862 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000562120 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000562951 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565406 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566380 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567727 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568513 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000623977 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000103197 ENST00000219476 N/A N/A N/A N/A N/A N/A N/A 1.108±0.00 N/A N/A N/A 2.461±0.00 N/A N/A
ENST00000350773 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000382538 4.578±0.00 N/A N/A N/A N/A N/A N/A 7.725±0.00 3.279±0.00 N/A 11.021±0.00 N/A 5.511±0.17 15.921±0.00
ENST00000401874 7.037±0.00 8.364±0.00 N/A 9.052±4.87 6.520±3.21 3.243±0.00 5.219±3.91 1.648±0.00 3.074±0.00 9.488±0.00 11.599±0.00 29.887±0.00 5.628±0.62 15.100±1.10
ENST00000432909 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000439117 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 12.660±0.00 N/A 6.464±0.00 14.999±0.00
ENST00000439673 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.257±0.00 N/A
ENST00000461648 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 17.710±0.00 66.473±0.00
ENST00000463601 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000463808 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467949 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000471143 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483020 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488675 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490108 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497886 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561695 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000562474 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563346 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568238 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568366 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568454 N/A N/A 2.688±0.00 N/A N/A N/A N/A N/A N/A 1.830±0.00 2.908±0.00 N/A N/A N/A
ENST00000568566 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568692 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569110 N/A N/A N/A N/A 21.631±0.00 23.481±0.00 N/A 18.345±0.00 14.709±0.00 N/A N/A N/A N/A 47.542±0.00
ENST00000569930 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000200059 ENST00000363189 N/A N/A N/A N/A 0.219±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.197±0.00
ENSG00000221656 ENST00000408729 0.445±0.00 0.455±0.00 N/A N/A 1.021±0.00 0.446±0.00 N/A 0.496±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000265867 ENST00000583451 1.373±0.00 1.894±0.00 N/A 0.580±0.00 N/A 0.896±0.00 0.557±0.00 0.515±0.00 1.038±0.00 1.115±0.00 N/A 194.379±0.00 N/A 1.835±0.00

Loading