C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00029O_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000106785-ENSG00000106789 CGP 9606 9:98069275-98192640
GeneTranscriptPositionBiotype
ENSG00000095380 (NANS)
N-acetylneuraminic acid synthase 		ENST00000210444 (NANS-001) 98056739-98083075 protein_coding
ENST00000415280 (NANS-006) 98076829-98081055 protein_coding
ENST00000427646 (NANS-002) 98078321-98082166 protein_coding
ENST00000461452 (NANS-004) 98074643-98083075 processed_transcript
ENST00000480925 (NANS-005) 98056770-98061259 processed_transcript
ENST00000495319 (NANS-003) 98056768-98078304 processed_transcript
ENSG00000106785 (TRIM14)
tripartite motif containing 14 		ENST00000341469 (TRIM14-001) 98084355-98119198 protein_coding
ENST00000342043 (TRIM14-002) 98084355-98119198 protein_coding
ENST00000375098 (TRIM14-004) 98069275-98119210 protein_coding
ENST00000475147 (TRIM14-007) 98087900-98119212 nonsense_mediated_decay
ENST00000478401 (TRIM14-005) 98094867-98119136 processed_transcript
ENST00000478530 (TRIM14-006) 98080840-98088001 processed_transcript
ENSG00000106789 (CORO2A)
coronin, actin binding protein, 2A 		ENST00000343933 (CORO2A-001) 98120975-98172884 protein_coding
ENST00000375077 (CORO2A-002) 98120975-98192640 protein_coding
ENSG00000274011 (Metazoa_SRP)
Metazoan signal recognition particle RNA 		ENST00000611137 (Metazoa_SRP.1-261) 98115885-98116135 misc_RNA
CIL_00029O_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000039853-ENSMUSG00000028337 CGP 10090 4:46493781-46602202
GeneTranscriptPositionBiotype
ENSMUSG00000028334 (Nans)
N-acetylneuraminic acid synthase (sialic acid synthase) 		ENSMUST00000030018 (Nans-001) 46489248-46503632 protein_coding
ENSMUST00000132345 (Nans-002) 46489319-46495136 processed_transcript
ENSMUST00000137874 (Nans-004) 46489985-46500745 processed_transcript
ENSMUST00000150584 (Nans-003) 46489374-46499082 processed_transcript
ENSMUSG00000028337 (Coro2a)
coronin, actin binding protein 2A 		ENSMUST00000030021 (Coro2a-201) 46536937-46566440 protein_coding
ENSMUST00000107756 (Coro2a-001) 46536943-46602202 protein_coding
ENSMUST00000107757 (Coro2a-002) 46536943-46566458 protein_coding
ENSMUST00000127304 (Coro2a-005) 46574922-46601894 processed_transcript
ENSMUST00000129121 (Coro2a-004) 46541316-46542802 retained_intron
ENSMUST00000135062 (Coro2a-006) 46540541-46542666 processed_transcript
ENSMUST00000139179 (Coro2a-003) 46543001-46601891 retained_intron
ENSMUSG00000039853 (Trim14)
tripartite motif-containing 14 		ENSMUST00000046897 (Trim14-001) 46506847-46536141 protein_coding
ENSMUST00000102924 (Trim14-004) 46509676-46536114 protein_coding
ENSMUST00000136978 (Trim14-002) 46494819-46534414 processed_transcript
ENSMUST00000142502 (Trim14-005) 46507388-46534442 processed_transcript
ENSMUST00000142606 (Trim14-006) 46523576-46534604 processed_transcript
ENSMUST00000184112 (Trim14-003) 46493781-46536122 nonsense_mediated_decay

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00029O_0001ENSG00000095380ENST00000210444ENST00000415280ENST00000427646ENST00000461452ENST00000480925ENST00000495319ENSG00000106785ENST00000341469ENST00000342043ENST00000375098ENST00000475147ENST00000478401ENST00000478530ENSG00000106789ENST00000343933ENST00000375077ENSG00000274011ENST00000611137CIL_00029O_0002ENSMUSG00000028334ENSMUST00000030018ENSMUST00000132345ENSMUST00000137874ENSMUST00000150584ENSMUSG00000028337ENSMUST00000030021ENSMUST00000107756ENSMUST00000107757ENSMUST00000127304ENSMUST00000129121ENSMUST00000135062ENSMUST00000139179ENSMUSG00000039853ENSMUST00000046897ENSMUST00000102924ENSMUST00000136978ENSMUST00000142502ENSMUST00000142606ENSMUST00000184112
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00029O_0001ENSG00000095380ENST00000210444ENST00000480925ENSG00000106785ENST00000341469ENST00000342043ENST00000478530ENSG00000106789ENST00000343933ENST00000375077ENSG00000274011ENST00000611137CIL_00029O_0002ENSMUSG00000028334ENSMUST00000030018ENSMUST00000137874ENSMUSG00000028337ENSMUST00000030021ENSMUST00000107756ENSMUST00000107757ENSMUST00000139179ENSMUSG00000039853ENSMUST00000046897
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000095380 ENST00000210444 22.086±0.00 24.295±0.00 N/A 14.116±5.24 11.635±5.20 26.386±10.38 9.472±4.88 15.174±9.78 18.370±12.36 27.158±16.51 8.303±7.31 23.448±7.50 27.834±3.02 17.102±6.21
ENST00000415280 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000427646 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000461452 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480925 N/A N/A 3.625±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495319 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000106785 ENST00000341469 1.788±0.00 3.552±0.00 1.694±0.00 1.295±0.43 1.241±0.13 3.361±1.04 0.363±0.00 4.153±1.34 4.307±2.65 3.169±0.35 0.062±0.00 5.144±3.32 3.886±0.09 1.727±0.35
ENST00000342043 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.412±0.00 N/A N/A N/A
ENST00000375098 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475147 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478401 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478530 13.781±0.00 N/A N/A 12.269±0.00 16.547±0.00 32.094±0.00 7.242±0.00 19.753±0.00 N/A 23.570±0.00 7.156±0.00 30.718±17.79 20.170±6.46 16.642±1.53
ENSG00000106789 ENST00000343933 N/A N/A N/A N/A 0.208±0.00 N/A N/A N/A N/A N/A N/A 2.069±0.00 N/A N/A
ENST00000375077 0.841±0.00 1.772±0.00 0.132±0.00 0.727±0.04 0.580±0.39 1.975±0.83 0.057±0.04 0.591±0.21 0.485±0.04 1.883±0.48 0.219±0.00 4.019±3.78 1.354±0.02 4.998±1.61
ENSG00000274011 ENST00000611137 0.256±0.00 1.510±0.00 N/A 0.356±0.00 0.699±0.00 0.236±0.00 0.519±0.00 0.132±0.00 0.057±0.00 0.059±0.00 0.060±0.00 1.312±1.15 N/A 0.709±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000028334 ENSMUST00000030018 12.297±3.19 11.411±1.28 11.010±1.50 12.948±5.84 13.080±0.99 173.324±30.10 4.402±0.43 5.050±1.21 11.524±7.13 13.617±0.95 5.433±0.58 13.829±3.77 22.486±12.94 N/A
ENSMUST00000132345 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137874 N/A N/A N/A N/A N/A N/A 3.712±0.00 N/A N/A N/A 2.926±0.00 20.585±0.00 32.589±16.38 N/A
ENSMUST00000150584 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000028337 ENSMUST00000030021 3.999±0.00 2.070±0.00 N/A N/A 8.223±1.24 37.674±0.00 0.668±0.00 N/A N/A 3.420±0.00 N/A 4.546±0.53 N/A 39.114±0.00
ENSMUST00000107756 7.818±0.79 N/A 2.125±0.59 3.731±0.97 9.440±3.13 49.380±8.18 0.727±0.00 1.387±0.36 2.434±0.47 4.271±0.95 0.595±0.00 5.361±2.37 9.987±6.86 N/A
ENSMUST00000107757 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 40.864±12.67
ENSMUST00000127304 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000129121 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000135062 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139179 N/A 5.929±0.49 N/A N/A 18.958±2.41 71.491±17.06 N/A N/A N/A 8.299±0.00 N/A 9.595±2.10 N/A 27.220±0.00
ENSMUSG00000039853 ENSMUST00000046897 N/A 4.712±0.97 N/A N/A 19.243±2.41 N/A N/A 1.625±0.00 4.194±0.00 8.243±0.00 N/A 9.510±1.74 N/A N/A
ENSMUST00000102924 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136978 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142502 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142606 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000184112 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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