C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002B0_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000163535-ENSG00000138356 CGP 9606 2:200510008-200677064
GeneTranscriptPositionBiotype
ENSG00000138356 (AOX1)
aldehyde oxidase 1 		ENST00000260930 (AOX1-007) 200660037-200670650 protein_coding
ENST00000374700 (AOX1-001) 200585868-200671495 protein_coding
ENST00000439380 (AOX1-008) 200662907-200677064 protein_coding
ENST00000454629 (AOX1-004) 200588174-200603297 protein_coding
ENST00000465297 (AOX1-002) 200609220-200670872 processed_transcript
ENST00000472553 (AOX1-006) 200638132-200642803 retained_intron
ENST00000485106 (AOX1-003) 200609243-200671136 processed_transcript
ENST00000485965 (AOX1-005) 200609209-200613967 retained_intron
ENSG00000155729 (KCTD18)
potassium channel tetramerization domain containing 18 		ENST00000359878 (KCTD18-001) 200488952-200510063 protein_coding
ENST00000409157 (KCTD18-002) 200488958-200510068 protein_coding
ENST00000447556 (KCTD18-005) 200499002-200510068 processed_transcript
ENST00000468413 (KCTD18-004) 200493226-200519784 processed_transcript
ENST00000478816 (KCTD18-003) 200495870-200510068 retained_intron
ENSG00000163535 (SGOL2)
shugoshin-like 2 (S. pombe) 		ENST00000357799 (SGOL2-001) 200526157-200583782 protein_coding
ENST00000409203 (SGOL2-002) 200526167-200570142 protein_coding
ENST00000418045 (SGOL2-003) 200510008-200535124 protein_coding
ENST00000460534 (SGOL2-004) 200531775-200533375 processed_transcript
ENST00000469840 (SGOL2-006) 200535141-200543622 processed_transcript
ENST00000488636 (SGOL2-005) 200535046-200542950 retained_intron
ENSG00000276477 (AC007163.1)
 ENST00000622385 (AC007163.1-201) 200675855-200675945 miRNA
CIL_0002B0_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000026039-ENSMUSG00000063558 CGP 10090 1:57995971-58106413
GeneTranscriptPositionBiotype
ENSMUSG00000026039 (Sgol2)
shugoshin-like 2 (S. pombe) 		ENSMUST00000027202 (Sgol2-001) 57995971-58025899 protein_coding
ENSMUST00000190746 (Sgol2-002) 58022716-58025898 retained_intron
ENSMUSG00000054770 (Kctd18)
potassium channel tetramerisation domain containing 18 		ENSMUST00000068000 (Kctd18-003) 57960054-57970052 retained_intron
ENSMUST00000114410 (Kctd18-001) 57955248-57970128 protein_coding
ENSMUST00000159826 (Kctd18-006) 57956580-57970048 protein_coding
ENSMUST00000160130 (Kctd18-005) 57963602-57970079 retained_intron
ENSMUST00000160614 (Kctd18-007) 57956692-57963447 retained_intron
ENSMUST00000161608 (Kctd18-002) 57955253-57969524 nonsense_mediated_decay
ENSMUST00000162410 (Kctd18-004) 57963566-57970079 retained_intron
ENSMUST00000163006 (Kctd18-008) 57956720-57962102 retained_intron
ENSMUST00000163061 (Kctd18-009) 57956072-58018956 nonsense_mediated_decay
ENSMUST00000164963 (Kctd18-201) 57955101-57970084 protein_coding
ENSMUST00000189298 (Kctd18-010) 57961158-57962981 retained_intron
ENSMUSG00000063558 (Aox1)
aldehyde oxidase 1 		ENSMUST00000001027 (Aox1-001) 58029931-58106413 protein_coding
ENSMUST00000160168 (Aox1-002) 58029964-58070879 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002B0_0001ENSG00000138356ENST00000260930ENST00000374700ENST00000439380ENST00000454629ENST00000465297ENST00000472553ENST00000485106ENST00000485965ENSG00000155729ENST00000359878ENST00000409157ENST00000447556ENST00000468413ENST00000478816ENSG00000163535ENST00000357799ENST00000409203ENST00000418045ENST00000460534ENST00000469840ENST00000488636ENSG00000276477ENST00000622385CIL_0002B0_0002ENSMUSG00000026039ENSMUST00000027202ENSMUST00000190746ENSMUSG00000054770ENSMUST00000068000ENSMUST00000114410ENSMUST00000159826ENSMUST00000160130ENSMUST00000160614ENSMUST00000161608ENSMUST00000162410ENSMUST00000163006ENSMUST00000163061ENSMUST00000164963ENSMUST00000189298ENSMUSG00000063558ENSMUST00000001027ENSMUST00000160168
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002B0_0001ENSG00000138356ENST00000260930ENST00000374700ENST00000465297ENST00000472553ENST00000485106ENST00000485965ENSG00000155729ENST00000359878ENST00000409157ENST00000447556ENST00000468413ENST00000478816ENSG00000163535ENST00000357799ENSG00000276477ENST00000622385CIL_0002B0_0002ENSMUSG00000026039ENSMUST00000027202ENSMUST00000190746ENSMUSG00000054770ENSMUST00000068000ENSMUST00000114410ENSMUST00000160130ENSMUST00000161608ENSMUST00000162410ENSMUST00000164963ENSMUST00000189298ENSMUSG00000063558ENSMUST00000001027ENSMUST00000160168
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000138356 ENST00000260930 N/A N/A N/A 1.474±0.00 N/A N/A N/A N/A N/A N/A N/A 0.530±0.00 7.450±0.00 9.063±0.00
ENST00000374700 9.323±0.00 8.501±0.00 1.970±0.00 N/A 3.452±1.58 13.248±0.00 1.097±0.78 62.796±51.20 113.828±111.11 3.884±2.16 N/A 7.888±8.36 1.189±0.37 8.722±7.70
ENST00000439380 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000454629 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465297 N/A N/A 10.407±0.00 N/A N/A 1.164±0.00 N/A N/A 2.376±0.00 N/A 1.091±0.00 5.297±3.45 0.962±0.00 N/A
ENST00000472553 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.838±0.00 N/A N/A N/A
ENST00000485106 N/A 2.747±0.00 N/A N/A N/A 4.846±0.00 N/A N/A 66.437±0.00 N/A N/A 0.050±0.00 0.210±0.00 N/A
ENST00000485965 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.526±0.00 N/A N/A N/A
ENSG00000155729 ENST00000359878 2.188±0.00 N/A N/A N/A 1.642±0.82 2.031±0.00 N/A N/A N/A 0.619±0.11 N/A 1.947±0.05 1.314±0.64 N/A
ENST00000409157 3.577±0.00 4.621±0.00 0.698±0.00 4.127±0.00 4.686±0.00 1.775±0.00 1.575±0.00 3.888±0.00 1.547±0.60 0.851±0.00 1.354±0.97 4.835±0.70 1.452±0.43 5.932±0.00
ENST00000447556 N/A N/A N/A N/A N/A 3.735±0.00 N/A N/A N/A N/A 0.575±0.00 N/A N/A N/A
ENST00000468413 N/A N/A N/A N/A N/A N/A N/A 1.679±0.00 4.246±0.00 1.277±0.00 N/A N/A N/A N/A
ENST00000478816 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.307±0.00 N/A N/A N/A N/A
ENSG00000163535 ENST00000357799 N/A N/A 0.144±0.00 0.599±0.00 N/A 0.402±0.09 0.211±0.08 0.667±0.00 0.304±0.00 0.267±0.00 N/A 2.106±1.61 0.483±0.43 13.011±4.86
ENST00000409203 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000418045 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000460534 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000469840 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488636 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000276477 ENST00000622385 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.423±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026039 ENSMUST00000027202 1.096±0.04 N/A 0.658±0.00 3.037±0.56 N/A 1.139±0.17 0.586±0.20 N/A 6.081±2.92 N/A 0.231±0.10 2.408±0.54 5.168±2.69 3.334±0.17
ENSMUST00000190746 N/A N/A N/A N/A N/A N/A N/A N/A 1.546±0.00 N/A N/A N/A N/A N/A
ENSMUSG00000054770 ENSMUST00000068000 N/A N/A N/A 0.549±0.00 N/A N/A N/A N/A 0.264±0.05 N/A N/A 1.634±0.27 N/A N/A
ENSMUST00000114410 1.810±0.63 1.724±0.02 3.874±0.56 5.467±0.82 1.664±0.03 1.652±0.78 1.038±0.27 1.549±0.41 1.291±0.83 1.867±0.39 1.245±0.39 1.980±0.68 3.453±1.08 3.052±0.69
ENSMUST00000159826 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000160130 0.998±0.16 N/A 0.840±0.00 N/A 0.758±0.11 0.527±0.00 0.371±0.03 0.372±0.07 N/A 1.064±0.10 0.286±0.00 1.018±0.06 N/A N/A
ENSMUST00000160614 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000161608 2.110±0.30 2.215±0.49 2.229±0.82 N/A 1.760±0.52 N/A 0.793±0.01 0.825±0.00 0.980±0.14 1.708±0.14 0.953±0.20 2.570±0.46 2.764±0.56 2.474±0.02
ENSMUST00000162410 N/A 1.678±0.43 N/A N/A 1.945±0.00 0.983±0.17 N/A N/A 0.420±0.16 1.511±0.19 N/A 2.331±0.61 N/A N/A
ENSMUST00000163006 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000163061 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000164963 1.575±0.00 1.743±0.00 N/A N/A 2.259±0.00 0.790±0.00 N/A N/A N/A 1.461±0.00 0.988±0.00 2.423±0.66 N/A N/A
ENSMUST00000189298 N/A N/A N/A N/A N/A 1.121±0.00 N/A N/A N/A N/A N/A 1.674±0.30 N/A N/A
ENSMUSG00000063558 ENSMUST00000001027 14.271±5.34 8.611±1.69 10.727±0.91 1.559±2.10 8.837±1.98 0.679±0.18 4.352±0.28 0.727±0.27 6.628±6.45 6.954±0.68 4.652±1.67 4.746±3.17 0.259±0.13 1.335±0.38
ENSMUST00000160168 1.396±0.43 1.310±0.30 1.341±0.13 0.035±0.00 1.085±0.21 0.168±0.08 0.585±0.02 0.082±0.01 0.608±0.58 1.381±0.42 0.918±0.20 1.448±0.99 0.020±0.00 0.387±0.13

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