C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002CH_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000139990-ENSG00000081177 CGP 9606 14:69050881-69244020
GeneTranscriptPositionBiotype
ENSG00000081177 (EXD2)
exonuclease 3'-5' domain containing 2 		ENST00000312994 (EXD2-201) 69191766-69244020 protein_coding
ENST00000409014 (EXD2-001) 69191531-69242356 protein_coding
ENST00000409018 (EXD2-002) 69191511-69242358 protein_coding
ENST00000409242 (EXD2-006) 69191806-69241449 protein_coding
ENST00000409675 (EXD2-007) 69191555-69242358 protein_coding
ENST00000409949 (EXD2-005) 69191766-69241517 protein_coding
ENST00000413191 (EXD2-003) 69191835-69230598 protein_coding
ENST00000461908 (EXD2-009) 69191813-69209438 processed_transcript
ENST00000465286 (EXD2-012) 69235612-69236543 retained_intron
ENST00000487724 (EXD2-008) 69191533-69209571 processed_transcript
ENST00000489133 (EXD2-011) 69224130-69230585 processed_transcript
ENST00000492815 (EXD2-004) 69191529-69242357 processed_transcript
ENST00000494629 (EXD2-010) 69227950-69234745 processed_transcript
ENSG00000139990 (DCAF5)
DDB1 and CUL4 associated factor 5 		ENST00000341516 (DCAF5-001) 69050881-69153126 protein_coding
ENST00000389997 (DCAF5-003) 69089204-69152983 protein_coding
ENST00000553293 (DCAF5-009) 69055210-69118194 processed_transcript
ENST00000553943 (DCAF5-006) 69119098-69153150 retained_intron
ENST00000554215 (DCAF5-005) 69051855-69152599 protein_coding
ENST00000554681 (DCAF5-007) 69091674-69153040 protein_coding
ENST00000556111 (DCAF5-008) 69062428-69152999 nonsense_mediated_decay
ENST00000556847 (DCAF5-004) 69053802-69152609 protein_coding
ENST00000557386 (DCAF5-002) 69053825-69153003 protein_coding
ENSG00000206768 (Y_RNA)
Y RNA 		ENST00000384041 (Y_RNA.1-621) 69143852-69143953 misc_RNA
ENSG00000258957 (RP11-363J20.1)
 ENST00000554898 (RP11-363J20.1-001) 69183020-69214092 lincRNA
ENST00000556182 (RP11-363J20.1-003) 69184074-69191420 lincRNA
ENST00000557409 (RP11-363J20.1-002) 69190878-69192092 lincRNA
ENSG00000259165 (DDX18P1)
DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 pseudogene 1 		ENST00000556558 (DDX18P1-001) 69083398-69085389 processed_pseudogene
ENSG00000276063 (RP11-817G13.3)
 ENST00000622466 (RP11-817G13.3-001) 69154311-69154804 lincRNA
CIL_0002CH_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000049106-ENSMUSG00000032705 CGP 10090 12:80335847-80498135
GeneTranscriptPositionBiotype
ENSMUSG00000032705 (Exd2)
exonuclease 3'-5' domain containing 2 		ENSMUST00000038185 (Exd2-201) 80463095-80498135 protein_coding
ENSMUSG00000049106 (Dcaf5)
DDB1 and CUL4 associated factor 5 		ENSMUST00000054145 (Dcaf5-201) 80335847-80436601 protein_coding
ENSMUSG00000088158 (Scarna3b)
small Cajal body-specific RNA 3B 		ENSMUST00000157533 (Scarna3b-201) 80391613-80391751 snoRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002CH_0001ENSG00000081177ENST00000312994ENST00000409014ENST00000409018ENST00000409242ENST00000409675ENST00000409949ENST00000413191ENST00000461908ENST00000465286ENST00000487724ENST00000489133ENST00000492815ENST00000494629ENSG00000139990ENST00000341516ENST00000389997ENST00000553293ENST00000553943ENST00000554215ENST00000554681ENST00000556111ENST00000556847ENST00000557386ENSG00000206768ENST00000384041ENSG00000258957ENST00000554898ENST00000556182ENST00000557409ENSG00000259165ENST00000556558ENSG00000276063ENST00000622466CIL_0002CH_0002ENSMUSG00000032705ENSMUST00000038185ENSMUSG00000049106ENSMUST00000054145ENSMUSG00000088158ENSMUST00000157533
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002CH_0001ENSG00000081177ENST00000312994ENST00000409014ENST00000409018ENST00000409242ENST00000409675ENST00000492815ENSG00000139990ENST00000341516ENST00000389997ENST00000554215ENST00000556847ENST00000557386ENSG00000206768ENST00000384041ENSG00000258957ENST00000554898ENSG00000259165ENST00000556558ENSG00000276063ENST00000622466CIL_0002CH_0002ENSMUSG00000032705ENSMUST00000038185ENSMUSG00000049106ENSMUST00000054145ENSMUSG00000088158ENSMUST00000157533
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000081177 ENST00000312994 N/A N/A N/A 0.487±0.00 N/A 0.747±0.00 0.802±0.00 N/A 0.417±0.00 N/A N/A N/A 0.868±0.00 N/A
ENST00000409014 N/A N/A 0.588±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000409018 1.666±0.00 1.047±0.00 N/A 1.936±0.11 5.565±0.00 2.119±0.02 0.713±0.00 2.333±0.00 0.380±0.00 1.741±0.00 0.957±0.00 1.692±0.88 1.099±0.16 N/A
ENST00000409242 N/A N/A N/A N/A N/A N/A N/A 1.081±0.00 N/A N/A N/A N/A N/A N/A
ENST00000409675 0.788±0.00 0.780±0.00 0.914±0.00 2.806±1.04 1.489±0.00 2.509±0.00 1.419±1.09 2.597±1.93 2.075±0.00 2.023±0.00 1.432±0.13 2.608±1.34 1.698±0.75 11.610±3.26
ENST00000409949 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000413191 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000461908 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465286 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487724 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489133 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492815 N/A N/A 0.478±0.00 1.848±0.00 N/A N/A 1.309±0.00 N/A 0.655±0.00 1.221±0.00 1.995±0.00 1.563±0.27 1.301±0.49 3.148±0.00
ENST00000494629 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000139990 ENST00000341516 1.511±0.00 1.759±0.00 N/A 1.746±0.35 1.000±0.00 2.047±0.00 3.638±3.31 1.140±0.00 0.992±0.00 1.154±0.20 10.711±9.23 2.089±1.15 1.073±0.17 5.730±1.28
ENST00000389997 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.353±0.00 N/A N/A
ENST00000553293 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553943 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554215 6.848±0.00 10.074±0.00 1.702±0.00 2.335±0.00 3.850±1.95 5.331±2.72 2.688±0.00 5.727±3.14 3.480±0.00 7.474±0.00 2.685±0.00 5.659±3.10 4.813±0.00 9.104±0.65
ENST00000554681 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556111 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556847 N/A N/A 3.742±0.00 N/A N/A N/A N/A N/A 1.692±0.00 N/A N/A N/A N/A 10.158±0.00
ENST00000557386 5.284±0.00 N/A N/A 1.240±0.00 2.997±1.44 3.635±1.08 3.121±2.27 1.576±0.00 2.079±0.24 4.853±3.77 1.776±0.00 2.412±0.62 3.679±0.85 21.809±5.13
ENSG00000206768 ENST00000384041 N/A 0.391±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000258957 ENST00000554898 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.420±0.00
ENST00000556182 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557409 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000259165 ENST00000556558 N/A N/A N/A N/A 0.101±0.05 N/A N/A 0.033±0.00 N/A N/A N/A 0.012±0.00 0.019±0.00 0.027±0.00
ENSG00000276063 ENST00000622466 N/A N/A 0.358±0.00 N/A N/A N/A N/A N/A N/A 0.144±0.00 N/A 0.045±0.00 N/A 0.123±0.06
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000032705 ENSMUST00000038185 2.941±1.18 4.059±1.98 5.367±0.12 10.312±2.64 2.083±1.06 2.688±1.77 2.478±0.74 2.994±0.40 2.268±0.93 5.247±0.99 9.031±2.70 5.601±2.93 3.227±0.82 8.500±2.99
ENSMUSG00000049106 ENSMUST00000054145 12.925±1.36 14.826±1.54 9.141±0.06 18.850±2.86 12.855±2.94 12.194±3.12 8.418±0.30 8.178±1.95 5.923±3.19 12.079±1.06 7.542±2.33 16.900±4.69 7.783±2.96 36.242±15.69
ENSMUSG00000088158 ENSMUST00000157533 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.015±3.69 N/A

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