C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002D6_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000151025-ENSG00000095777 CGP 9606 10:25175062-26212527
GeneTranscriptPositionBiotype
ENSG00000095777 (MYO3A)
myosin IIIA 		ENST00000265944 (MYO3A-001) 25934267-26212527 protein_coding
ENST00000376301 (MYO3A-004) 25952100-26017027 protein_coding
ENST00000376302 (MYO3A-003) 25934274-26023481 protein_coding
ENST00000477691 (MYO3A-005) 26165842-26168838 processed_transcript
ENST00000478093 (MYO3A-002) 26203024-26204502 processed_transcript
ENST00000543632 (MYO3A-201) 25935788-26212209 protein_coding
ENST00000619592 (MYO3A-202) 25934267-26211972 protein_coding
ENSG00000151025 (GPR158)
G protein-coupled receptor 158 		ENST00000376351 (GPR158-001) 25175062-25602226 protein_coding
ENST00000482641 (GPR158-002) 25466190-25475949 processed_transcript
ENST00000490549 (GPR158-004) 25594213-25602226 processed_transcript
ENSG00000226304 (RP11-435M3.2)
 ENST00000452911 (RP11-435M3.2-001) 25924448-25933710 antisense
ENSG00000227465 (GPN3P1)
GPN-loop GTPase 3 pseudogene 1 		ENST00000423883 (GPN3P1-001) 25647570-25648104 processed_pseudogene
ENSG00000233642 (GPR158-AS1)
GPR158 antisense RNA 1 		ENST00000449643 (GPR158-AS1-001) 25158072-25176276 antisense
ENSG00000271563 (HIRAP1)
histone cell cycle regulator pseudogene 1 		ENST00000605318 (HIRAP1-001) 25691537-25692323 processed_pseudogene
ENSG00000274242 (RP11-20I6.1)
 ENST00000613843 (RP11-20I6.1-001) 25244061-25244854 unprocessed_pseudogene
CIL_0002D6_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000045967-ENSMUSG00000025716 CGP 10090 2:21367542-22618252
GeneTranscriptPositionBiotype
ENSMUSG00000025716 (Myo3a)
myosin IIIA 		ENSMUST00000044749 (Myo3a-201) 22227503-22618252 protein_coding
ENSMUST00000138850 (Myo3a-004) 22227505-22283571 processed_transcript
ENSMUST00000138863 (Myo3a-002) 22558215-22618247 protein_coding
ENSMUST00000142435 (Myo3a-003) 22227505-22293902 processed_transcript
ENSMUST00000149423 (Myo3a-005) 22579711-22602262 processed_transcript
ENSMUST00000153002 (Myo3a-001) 22241057-22407454 protein_coding
ENSMUSG00000045967 (Gpr158)
G protein-coupled receptor 158 		ENSMUST00000055946 (Gpr158-001) 21367542-21830547 protein_coding
ENSMUST00000155760 (Gpr158-002) 21367567-21811688 retained_intron
ENSMUSG00000080846 (Gm13379)
predicted gene 13379 		ENSMUST00000118053 (Gm13379-001) 21442909-21443529 processed_pseudogene
ENSMUSG00000081467 (Gm13337)
predicted gene 13337 		ENSMUST00000119183 (Gm13337-001) 22067826-22069419 processed_pseudogene
ENSMUSG00000082516 (Gm13342)
predicted gene 13342 		ENSMUST00000121055 (Gm13342-001) 22410525-22410731 processed_pseudogene
ENSMUSG00000082884 (Gm13339)
predicted gene 13339 		ENSMUST00000120651 (Gm13339-001) 22590024-22590533 unprocessed_pseudogene
ENSMUSG00000083563 (Gm13340)
predicted gene 13340 		ENSMUST00000117219 (Gm13340-001) 22588103-22589647 unprocessed_pseudogene
ENSMUSG00000083863 (Gm13341)
predicted gene 13341 		ENSMUST00000120780 (Gm13341-001) 22587291-22587962 unprocessed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002D6_0001ENSG00000095777ENST00000265944ENST00000376301ENST00000376302ENST00000477691ENST00000478093ENST00000543632ENST00000619592ENSG00000151025ENST00000376351ENST00000482641ENST00000490549ENSG00000226304ENST00000452911ENSG00000227465ENST00000423883ENSG00000233642ENST00000449643ENSG00000271563ENST00000605318ENSG00000274242ENST00000613843CIL_0002D6_0002ENSMUSG00000025716ENSMUST00000044749ENSMUST00000138850ENSMUST00000138863ENSMUST00000142435ENSMUST00000149423ENSMUST00000153002ENSMUSG00000045967ENSMUST00000055946ENSMUST00000155760ENSMUSG00000080846ENSMUST00000118053ENSMUSG00000081467ENSMUST00000119183ENSMUSG00000082516ENSMUST00000121055ENSMUSG00000082884ENSMUST00000120651ENSMUSG00000083563ENSMUST00000117219ENSMUSG00000083863ENSMUST00000120780
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002D6_0001ENSG00000095777ENST00000265944ENST00000376301ENST00000376302ENST00000477691ENST00000478093ENST00000543632ENST00000619592ENSG00000151025ENST00000376351ENST00000490549ENSG00000226304ENST00000452911ENSG00000227465ENST00000423883ENSG00000233642ENST00000449643ENSG00000271563ENST00000605318ENSG00000274242ENST00000613843CIL_0002D6_0002ENSMUSG00000025716ENSMUST00000044749ENSMUST00000138850ENSMUST00000138863ENSMUST00000142435ENSMUST00000149423ENSMUST00000153002ENSMUSG00000045967ENSMUST00000055946ENSMUST00000155760ENSMUSG00000080846ENSMUST00000118053ENSMUSG00000081467ENSMUST00000119183ENSMUSG00000082516ENSMUST00000121055ENSMUSG00000082884ENSMUST00000120651ENSMUSG00000083563ENSMUST00000117219ENSMUSG00000083863ENSMUST00000120780
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000095777 ENST00000265944 N/A 0.026±0.00 N/A N/A N/A N/A N/A 0.020±0.00 N/A N/A N/A 0.020±0.01 N/A 1.732±0.07
ENST00000376301 N/A N/A N/A 0.036±0.00 N/A N/A N/A 0.102±0.00 N/A 0.087±0.00 N/A N/A N/A N/A
ENST00000376302 N/A N/A N/A N/A N/A 0.026±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477691 N/A N/A N/A N/A N/A N/A N/A 0.210±0.00 N/A N/A N/A N/A N/A N/A
ENST00000478093 N/A N/A N/A N/A N/A N/A N/A 0.140±0.00 N/A N/A N/A N/A N/A N/A
ENST00000543632 0.016±0.00 0.048±0.00 N/A 0.065±0.04 0.019±0.00 N/A N/A N/A N/A 0.045±0.00 N/A N/A N/A N/A
ENST00000619592 N/A N/A N/A 0.008±0.00 0.026±0.02 0.026±0.00 0.012±0.00 0.006±0.00 0.018±0.00 0.080±0.07 N/A 0.026±0.00 0.008±0.00 N/A
ENSG00000151025 ENST00000376351 N/A N/A N/A 6.605±0.57 N/A 0.115±0.00 N/A N/A N/A 0.129±0.00 N/A 0.051±0.04 0.122±0.04 0.436±0.16
ENST00000482641 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490549 0.018±0.00 0.020±0.00 0.027±0.00 4.534±0.00 0.104±0.00 0.123±0.02 0.020±0.00 0.040±0.00 0.040±0.00 0.096±0.00 0.052±0.00 0.087±0.08 0.298±0.08 0.217±0.01
ENSG00000226304 ENST00000452911 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.902±0.00
ENSG00000227465 ENST00000423883 N/A N/A N/A 0.019±0.00 N/A N/A 0.073±0.00 N/A N/A N/A N/A N/A 0.048±0.00 N/A
ENSG00000233642 ENST00000449643 N/A N/A 0.134±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000271563 ENST00000605318 N/A N/A N/A 0.053±0.00 N/A 0.104±0.00 N/A N/A N/A N/A N/A N/A 0.362±0.21 N/A
ENSG00000274242 ENST00000613843 N/A N/A N/A 1.011±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025716 ENSMUST00000044749 N/A N/A N/A 0.013±0.00 N/A N/A N/A N/A 0.003±0.00 N/A N/A N/A N/A 0.071±0.02
ENSMUST00000138850 N/A N/A N/A N/A N/A 0.442±0.17 N/A N/A N/A N/A N/A 0.015±0.00 N/A N/A
ENSMUST00000138863 N/A N/A N/A 0.017±0.00 N/A 0.293±0.00 N/A 0.023±0.00 0.005±0.00 N/A N/A 0.014±0.00 N/A 0.140±0.10
ENSMUST00000142435 N/A N/A N/A N/A N/A N/A N/A 0.019±0.00 N/A N/A N/A N/A N/A 0.021±0.00
ENSMUST00000149423 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.159±0.00 N/A N/A
ENSMUST00000153002 N/A N/A N/A 0.020±0.00 N/A 0.737±0.15 N/A 0.018±0.00 N/A N/A N/A 0.010±0.00 0.004±0.00 0.113±0.07
ENSMUSG00000045967 ENSMUST00000055946 0.015±0.00 0.150±0.05 0.005±0.00 3.614±3.13 N/A 0.053±0.00 0.089±0.01 0.034±0.02 0.001±0.00 0.014±0.00 N/A 0.030±0.01 0.007±0.00 0.127±0.03
ENSMUST00000155760 0.012±0.00 0.288±0.09 0.003±0.00 N/A N/A 0.020±0.01 N/A 0.022±0.00 0.003±0.00 N/A N/A 0.049±0.03 N/A N/A
ENSMUSG00000080846 ENSMUST00000118053 N/A N/A N/A 0.226±0.02 N/A N/A N/A N/A N/A N/A N/A N/A 0.029±0.00 0.093±0.00
ENSMUSG00000081467 ENSMUST00000119183 0.265±0.14 N/A 0.005±0.00 0.950±0.93 0.055±0.03 0.030±0.00 N/A 0.045±0.01 0.006±0.01 0.035±0.02 N/A 0.152±0.15 0.053±0.05 1.745±0.21
ENSMUSG00000082516 ENSMUST00000121055 2.617±0.00 33.292±7.04 0.323±0.06 N/A 4.509±2.95 11.290±6.14 21.726±14.22 43.551±6.17 33.285±27.99 5.275±1.79 N/A 16.757±5.15 N/A 13.772±7.04
ENSMUSG00000082884 ENSMUST00000120651 N/A N/A 0.041±0.00 1.039±1.42 N/A N/A 0.290±0.00 N/A 2.927±2.91 N/A 2.761±1.78 0.662±0.43 0.322±0.36 N/A
ENSMUSG00000083563 ENSMUST00000117219 1.811±1.43 0.379±0.15 1.897±0.57 35.505±43.86 1.935±2.48 0.352±0.14 4.594±1.38 0.956±0.39 1.876±3.26 0.102±0.04 6.891±2.44 0.716±0.72 0.649±0.38 4.063±8.01
ENSMUSG00000083863 ENSMUST00000120780 4.649±2.01 1.182±0.14 2.296±0.73 13.192±17.39 4.044±2.27 1.089±0.53 27.317±5.38 13.728±2.27 10.441±16.04 2.280±0.81 1.547±0.18 1.015±0.74 1.626±1.50 0.537±0.30

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