C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002DI_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000125879-ENSG00000125851 CGP 9606 20:16748358-17484578
GeneTranscriptPositionBiotype
ENSG00000125851 (PCSK2)
proprotein convertase subtilisin/kexin type 2 		ENST00000262545 (PCSK2-001) 17226991-17484578 protein_coding
ENST00000377899 (PCSK2-002) 17226107-17484578 protein_coding
ENST00000459871 (PCSK2-004) 17463433-17482287 processed_transcript
ENST00000470007 (PCSK2-003) 17228131-17409310 processed_transcript
ENST00000536609 (PCSK2-005) 17227056-17482283 protein_coding
ENSG00000125879 (OTOR)
otoraplin 		ENST00000246081 (OTOR-001) 16748358-16752164 protein_coding
ENST00000486129 (OTOR-002) 16749360-16751782 processed_transcript
ENST00000490148 (OTOR-003) 16749374-16770062 processed_transcript
ENSG00000220540 (RP1-298M8.1)
 ENST00000402970 (RP1-298M8.1-001) 17188134-17188344 processed_pseudogene
ENSG00000236985 (RP5-1195D24.1)
 ENST00000422574 (RP5-1195D24.1-001) 16857962-16864148 lincRNA

Homo sapiens Ensembl (GRCh38)

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CIL_0002DI_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000027416-ENSMUSG00000027419 CGP 10090 2:143078473-143816285
GeneTranscriptPositionBiotype
ENSMUSG00000027416 (Otor)
otoraplin 		ENSMUST00000028902 (Otor-001) 143078473-143081713 protein_coding
ENSMUSG00000027419 (Pcsk2)
proprotein convertase subtilisin/kexin type 2 		ENSMUST00000028905 (Pcsk2-002) 143546156-143816285 protein_coding
ENSMUST00000124751 (Pcsk2-001) 143546271-143576734 processed_transcript
ENSMUSG00000080895 (Gm11645)
predicted gene 11645 		ENSMUST00000121589 (Gm11645-001) 143506411-143507059 processed_pseudogene
ENSMUSG00000083047 (Gm14082)
predicted gene 14082 		ENSMUST00000118582 (Gm14082-001) 143150830-143151630 processed_pseudogene
ENSMUSG00000086171 (Pcsk2os1)
proprotein convertase subtilisin/kexin type 2, opposite strand 1 		ENSMUST00000126735 (Pcsk2os1-001) 143535476-143547837 processed_transcript
ENSMUST00000156780 (Pcsk2os1-002) 143537970-143545977 processed_transcript
ENSMUSG00000087115 (Pcsk2os2)
proprotein convertase subtilisin/kexin type 2, opposite strand 2 		ENSMUST00000153878 (Pcsk2os2-001) 143747583-143789186 antisense
ENSMUST00000156362 (Pcsk2os2-002) 143749164-143795965 antisense

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002DI_0001ENSG00000125851ENST00000262545ENST00000377899ENST00000459871ENST00000470007ENST00000536609ENSG00000125879ENST00000246081ENST00000486129ENST00000490148ENSG00000220540ENST00000402970ENSG00000236985ENST00000422574CIL_0002DI_0002ENSMUSG00000027416ENSMUST00000028902ENSMUSG00000027419ENSMUST00000028905ENSMUST00000124751ENSMUSG00000080895ENSMUST00000121589ENSMUSG00000083047ENSMUST00000118582ENSMUSG00000086171ENSMUST00000126735ENSMUST00000156780ENSMUSG00000087115ENSMUST00000153878ENSMUST00000156362
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002DI_0001ENSG00000125851ENST00000262545ENST00000377899ENST00000459871ENST00000470007ENST00000536609ENSG00000125879ENST00000246081ENST00000486129ENST00000490148ENSG00000220540ENST00000402970ENSG00000236985ENST00000422574CIL_0002DI_0002ENSMUSG00000027416ENSMUST00000028902ENSMUSG00000027419ENSMUST00000028905ENSMUST00000124751ENSMUSG00000080895ENSMUST00000121589ENSMUSG00000083047ENSMUST00000118582ENSMUSG00000086171ENSMUST00000126735ENSMUSG00000087115ENSMUST00000153878
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000125851 ENST00000262545 N/A N/A 0.021±0.00 5.512±4.06 0.018±0.00 N/A N/A N/A N/A N/A N/A 0.552±0.02 0.116±0.00 0.679±0.00
ENST00000377899 0.020±0.00 0.045±0.00 N/A 10.851±0.00 N/A 0.578±0.50 0.371±0.00 N/A N/A 0.092±0.00 N/A N/A N/A 0.233±0.00
ENST00000459871 0.017±0.00 0.088±0.00 N/A N/A 0.022±0.00 N/A N/A N/A N/A 0.149±0.00 N/A N/A N/A N/A
ENST00000470007 N/A N/A N/A N/A N/A 0.754±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000536609 N/A N/A N/A 6.846±0.00 0.071±0.00 1.717±1.40 0.431±0.00 0.122±0.05 0.188±0.18 1.058±0.00 0.054±0.03 1.737±1.58 0.527±0.25 2.540±1.24
ENSG00000125879 ENST00000246081 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.015±0.00 N/A N/A
ENST00000486129 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.029±0.00 0.049±0.00 N/A
ENST00000490148 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.068±0.00
ENSG00000220540 ENST00000402970 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.381±0.00
ENSG00000236985 ENST00000422574 N/A N/A N/A N/A 0.016±0.00 N/A N/A N/A N/A N/A N/A 0.018±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027416 ENSMUST00000028902 0.103±0.04 N/A 0.009±0.00 0.226±0.14 N/A 0.134±0.00 N/A N/A 0.028±0.02 N/A 0.051±0.00 0.680±0.30 0.012±0.00 N/A
ENSMUSG00000027419 ENSMUST00000028905 0.026±0.01 0.703±0.27 0.069±0.02 22.222±23.54 0.046±0.02 0.807±0.15 0.016±0.01 0.053±0.01 0.013±0.01 0.113±0.09 0.008±0.00 0.064±0.05 0.007±0.00 0.123±0.00
ENSMUST00000124751 0.026±0.01 N/A N/A N/A 0.018±0.00 N/A 0.011±0.00 0.025±0.00 0.017±0.00 0.040±0.00 N/A 0.048±0.00 0.007±0.00 0.024±0.00
ENSMUSG00000080895 ENSMUST00000121589 0.070±0.00 N/A 0.077±0.05 0.084±0.04 N/A N/A N/A N/A 0.023±0.01 N/A 0.062±0.00 0.178±0.10 0.043±0.03 0.058±0.02
ENSMUSG00000083047 ENSMUST00000118582 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.053±0.00
ENSMUSG00000086171 ENSMUST00000126735 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.009±0.00 0.096±0.00 N/A N/A
ENSMUST00000156780 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000087115 ENSMUST00000153878 0.018±0.01 N/A N/A N/A 0.016±0.00 N/A N/A N/A 0.015±0.01 0.022±0.00 0.009±0.00 0.030±0.00 0.008±0.00 N/A
ENSMUST00000156362 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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