Institute of Cardiovascular Regeneration Webtool Repository

Warning (512): _cake_core_ cache was unable to write 'cake_dev_eng' to File cache [CORE/Cake/Cache/Cache.php, line 323]

Code Context

                ),
                E_USER_WARNING
            );

$key = 'cake_dev_eng'
$value = array(
	'LC_MESSAGES' => array()
)
$config = '_cake_core_'
$settings = array(
	'prefix' => '*****',
	'engine' => 'File',
	'path' => '/var/www/c-it-loci/app/tmp/cache/persistent/',
	'serialize' => true,
	'duration' => (int) 10,
	'lock' => true,
	'isWindows' => false,
	'mask' => (int) 436,
	'probability' => (int) 100,
	'groups' => array()
)
$success = false

Cache::write() - CORE/Cake/Cache/Cache.php, line 323
I18n::translate() - CORE/Cake/I18n/I18n.php, line 237
__d - CORE/Cake/basics.php, line 617
Cache::write() - CORE/Cake/Cache/Cache.php, line 321
DataSource::listSources() - CORE/Cake/Model/Datasource/DataSource.php, line 110
Mysql::listSources() - CORE/Cake/Model/Datasource/Database/Mysql.php, line 219
Model::setSource() - CORE/Cake/Model/Model.php, line 1142
Model::getDataSource() - CORE/Cake/Model/Model.php, line 3551
Model::query() - CORE/Cake/Model/Model.php, line 3353
RegionController::show() - APP/Controller/RegionController.php, line 338
ReflectionMethod::invokeArgs() - [internal], line ??
Controller::invokeAction() - CORE/Cake/Controller/Controller.php, line 490
Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 191
Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 165
[main] - APP/webroot/index.php, line 108

Warning (512): _cake_model_ cache was unable to write 'default_citloci_list' to File cache [CORE/Cake/Cache/Cache.php, line 323]

Code Context

                ),
                E_USER_WARNING
            );

$key = 'default_citloci_list'
$value = null
$config = '_cake_model_'
$settings = array(
	'prefix' => '*****',
	'engine' => 'File',
	'path' => '/var/www/c-it-loci/app/tmp/cache/models/',
	'serialize' => true,
	'duration' => (int) 10,
	'lock' => true,
	'isWindows' => false,
	'mask' => (int) 436,
	'probability' => (int) 100,
	'groups' => array()
)
$success = false

Cache::write() - CORE/Cake/Cache/Cache.php, line 323
DataSource::listSources() - CORE/Cake/Model/Datasource/DataSource.php, line 110
Mysql::listSources() - CORE/Cake/Model/Datasource/Database/Mysql.php, line 219
Model::setSource() - CORE/Cake/Model/Model.php, line 1142
Model::getDataSource() - CORE/Cake/Model/Model.php, line 3551
Model::query() - CORE/Cake/Model/Model.php, line 3353
RegionController::show() - APP/Controller/RegionController.php, line 338
ReflectionMethod::invokeArgs() - [internal], line ??
Controller::invokeAction() - CORE/Cake/Controller/Controller.php, line 490
Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 191
Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 165
[main] - APP/webroot/index.php, line 108

Warning (512): _cake_model_ cache was unable to write 'default_citloci_list' to File cache [CORE/Cake/Cache/Cache.php, line 323]

Code Context

                ),
                E_USER_WARNING
            );

$key = 'default_citloci_list'
$value = array(
	(int) 0 => 'conserved_region_elements',
	(int) 1 => 'conserved_regions',
	(int) 2 => 'diffexp',
	(int) 3 => 'experiment',
	(int) 4 => 'expressed_transcripts',
	(int) 5 => 'external_accessions',
	(int) 6 => 'genes',
	(int) 7 => 'go_annotations',
	(int) 8 => 'homologues',
	(int) 9 => 'maptranscripttoregion',
	(int) 10 => 'organism',
	(int) 11 => 'sample',
	(int) 12 => 'study',
	(int) 13 => 'synonyms',
	(int) 14 => 'transcripts'
)
$config = '_cake_model_'
$settings = array(
	'prefix' => '*****',
	'engine' => 'File',
	'path' => '/var/www/c-it-loci/app/tmp/cache/models/',
	'serialize' => true,
	'duration' => (int) 10,
	'lock' => true,
	'isWindows' => false,
	'mask' => (int) 436,
	'probability' => (int) 100,
	'groups' => array()
)
$success = false

Cache::write() - CORE/Cake/Cache/Cache.php, line 323
DataSource::listSources() - CORE/Cake/Model/Datasource/DataSource.php, line 110
Mysql::listSources() - CORE/Cake/Model/Datasource/Database/Mysql.php, line 236
Model::setSource() - CORE/Cake/Model/Model.php, line 1142
Model::getDataSource() - CORE/Cake/Model/Model.php, line 3551
Model::query() - CORE/Cake/Model/Model.php, line 3353
RegionController::show() - APP/Controller/RegionController.php, line 338
ReflectionMethod::invokeArgs() - [internal], line ??
Controller::invokeAction() - CORE/Cake/Controller/Controller.php, line 490
Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 191
Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 165
[main] - APP/webroot/index.php, line 108

Region Summary

CIL_0002EN_0001 (Click to Hide/Show)

Source ID	Type	Tax ID	Position
ENSG00000185527-ENSG00000204237	CGP	9606	17:81650459-81666635
Gene	Transcript	Position	Biotype
ENSG00000185298 (CCDC137) coiled-coil domain containing 137	ENST00000329214 (CCDC137-001)	81666364-81673899	protein_coding
	ENST00000571916 (CCDC137-004)	81667769-81672721	nonsense_mediated_decay
	ENST00000572531 (CCDC137-005)	81671589-81672102	retained_intron
	ENST00000574107 (CCDC137-003)	81666755-81672685	protein_coding
	ENST00000574200 (CCDC137-006)	81666772-81670291	nonsense_mediated_decay
	ENST00000575223 (CCDC137-002)	81666752-81673904	nonsense_mediated_decay
ENSG00000185527 (PDE6G) phosphodiesterase 6G, cGMP-specific, rod, gamma	ENST00000331056 (PDE6G-201)	81650459-81656583	protein_coding
	ENST00000571004 (PDE6G-001)	81650963-81653694	protein_coding
	ENST00000571224 (PDE6G-005)	81650925-81663112	protein_coding
	ENST00000573076 (PDE6G-002)	81650459-81657059	protein_coding
	ENST00000574024 (PDE6G-003)	81650459-81656571	protein_coding
	ENST00000574777 (PDE6G-004)	81650740-81663104	processed_transcript
ENSG00000204237 (OXLD1) oxidoreductase-like domain containing 1	ENST00000374741 (OXLD1-001)	81665036-81666588	protein_coding
	ENST00000571092 (OXLD1-004)	81665461-81666578	nonsense_mediated_decay
	ENST00000571503 (OXLD1-006)	81665101-81666595	protein_coding
	ENST00000571757 (OXLD1-003)	81665141-81666633	nonsense_mediated_decay
	ENST00000573786 (OXLD1-007)	81665056-81666146	processed_transcript
	ENST00000575963 (OXLD1-002)	81665036-81666635	retained_intron
	ENST00000575992 (OXLD1-005)	81665156-81666537	nonsense_mediated_decay

CIL_0002EN_0002 (Click to Hide/Show)

Source ID	Type	Tax ID	Position
ENSMUSG00000025386-ENSMUSG00000039670	CGP	10090	11:120447605-120458068
Gene	Transcript	Position	Biotype
ENSMUSG00000025386 (Pde6g) phosphodiesterase 6G, cGMP-specific, rod, gamma	ENSMUST00000026452 (Pde6g-001)	120447626-120453500	protein_coding
	ENSMUST00000141795 (Pde6g-003)	120447605-120453434	processed_transcript
	ENSMUST00000155421 (Pde6g-002)	120447624-120453452	processed_transcript
ENSMUSG00000039670 (Oxld1) oxidoreductase like domain containing 1	ENSMUST00000044007 (Oxld1-001)	120456606-120458068	protein_coding
	ENSMUST00000137632 (Oxld1-002)	120456885-120457936	protein_coding

Expression Patterns

Heat Map

Heat Map (Expressed Only)

Numeric Values

Gene

Transcript

Adipose

Adrenal

Bladder

Brain

Breast

Colon

Heart

Kidney

Liver

Lung

Muscle

Ovary

Placenta

Testis

ENSG00000185298

ENST00000329214

5.533±0.00

10.797±0.00

0.483±0.00

2.394±1.21

4.111±4.03

1.489±1.18

2.575±0.00

4.912±4.67

3.344±2.75

1.840±1.42

3.521±0.00

5.685±2.60

6.472±2.08

5.301±1.21

ENST00000571916

N/A

1.098±0.00

N/A

2.193±0.99

N/A

4.650±0.00

ENST00000572531

N/A

ENST00000574107

N/A

0.275±0.00

N/A

2.112±0.00

5.006±0.00

N/A

ENST00000574200

N/A

0.361±0.00

1.425±0.00

N/A

ENST00000575223

N/A

1.968±0.00

0.583±0.00

2.292±0.00

N/A

0.126±0.00

1.646±1.39

N/A

ENSG00000185527

ENST00000331056

N/A

2.692±0.00

N/A

0.341±0.00

1.031±0.00

N/A

0.277±0.00

6.223±2.24

0.087±0.00

ENST00000571004

0.310±0.00

6.960±0.00

N/A

0.115±0.00

0.396±0.17

N/A

0.716±0.00

0.470±0.00

N/A

0.232±0.08

0.574±0.00

0.206±0.05

ENST00000571224

0.100±0.00

N/A

ENST00000573076

N/A

0.055±0.00

N/A

0.899±0.50

N/A

ENST00000574024

N/A

5.259±0.00

N/A

0.170±0.00

0.399±0.00

0.152±0.00

N/A

0.148±0.04

0.666±0.00

N/A

ENST00000574777

0.226±0.00

5.134±0.00

N/A

0.081±0.00

0.520±0.07

0.242±0.00

0.271±0.00

N/A

1.072±0.00

0.259±0.00

N/A

0.570±0.00

ENSG00000204237

ENST00000374741

N/A

1.230±0.00

4.759±0.00

N/A

2.308±0.00

0.937±0.00

N/A

0.947±0.00

0.883±0.00

1.453±0.00

N/A

14.370±0.00

N/A

ENST00000571092

N/A

ENST00000571503

N/A

1.843±0.00

N/A

ENST00000571757

N/A

ENST00000573786

N/A

5.035±0.00

N/A

ENST00000575963

2.775±0.00

8.897±0.00

0.912±0.00

3.322±1.86

2.353±1.89

1.609±0.51

2.135±0.00

4.587±3.83

1.994±1.12

2.672±2.42

N/A

4.042±2.36

5.101±0.54

4.835±0.49

ENST00000575992

N/A

Gene

Transcript

Adipose

Adrenal

Bladder

Brain

Breast

Colon

Heart

Kidney

Liver

Lung

Muscle

Ovary

Placenta

Testis

ENSMUSG00000025386

ENSMUST00000026452

0.217±0.15

0.267±0.17

0.102±0.00

0.088±0.01

0.230±0.04

0.187±0.06

0.150±0.12

0.644±0.16

0.354±0.25

0.069±0.05

0.280±0.15

0.518±0.33

0.277±0.19

0.543±0.22

ENSMUST00000141795

0.224±0.00

0.168±0.03

N/A

0.457±0.16

0.202±0.15

N/A

0.170±0.00

0.174±0.00

0.174±0.03

N/A

0.455±0.38

N/A

ENSMUST00000155421

0.043±0.02

0.074±0.03

N/A

0.071±0.06

0.135±0.04

0.077±0.03

0.079±0.05

0.055±0.02

0.089±0.09

0.083±0.03

0.091±0.05

0.154±0.08

0.110±0.07

0.079±0.01

ENSMUSG00000039670

ENSMUST00000044007

12.788±1.94

34.694±9.54

9.579±3.71

3.309±1.43

16.270±7.41

11.047±3.70

21.292±1.74

19.742±3.17

9.729±3.83

6.748±0.56

9.945±1.54

12.071±4.19

2.632±1.29

3.100±0.38

ENSMUST00000137632

N/A

2.980±0.00

N/A

2.321±0.00

1.938±0.00

0.371±0.00

N/A

Warning (512): _cake_core_ cache was unable to write 'file_map' to File cache [CORE/Cake/Cache/Cache.php, line 323]

Code Context

                ),
                E_USER_WARNING
            );

$key = 'file_map'
$value = array(
	'Configure' => '/var/www/c-it-loci/lib/Cake/Core/Configure.php',
	'Hash' => '/var/www/c-it-loci/lib/Cake/Utility/Hash.php',
	'Cache' => '/var/www/c-it-loci/lib/Cake/Cache/Cache.php',
	'FileEngine' => '/var/www/c-it-loci/lib/Cake/Cache/Engine/FileEngine.php',
	'CacheEngine' => '/var/www/c-it-loci/lib/Cake/Cache/CacheEngine.php',
	'Inflector' => '/var/www/c-it-loci/lib/Cake/Utility/Inflector.php',
	'ErrorHandler' => '/var/www/c-it-loci/lib/Cake/Error/ErrorHandler.php',
	'CakePlugin' => '/var/www/c-it-loci/lib/Cake/Core/CakePlugin.php',
	'CakeLog' => '/var/www/c-it-loci/lib/Cake/Log/CakeLog.php',
	'LogEngineCollection' => '/var/www/c-it-loci/lib/Cake/Log/LogEngineCollection.php',
	'ObjectCollection' => '/var/www/c-it-loci/lib/Cake/Utility/ObjectCollection.php',
	'FileLog' => '/var/www/c-it-loci/lib/Cake/Log/Engine/FileLog.php',
	'BaseLog' => '/var/www/c-it-loci/lib/Cake/Log/Engine/BaseLog.php',
	'CakeLogInterface' => '/var/www/c-it-loci/lib/Cake/Log/CakeLogInterface.php',
	'Debugger' => '/var/www/c-it-loci/lib/Cake/Utility/Debugger.php',
	'String' => '/var/www/c-it-loci/lib/Cake/Utility/String.php',
	'Dispatcher' => '/var/www/c-it-loci/lib/Cake/Routing/Dispatcher.php',
	'CakeEventListener' => '/var/www/c-it-loci/lib/Cake/Event/CakeEventListener.php',
	'CakeRequest' => '/var/www/c-it-loci/lib/Cake/Network/CakeRequest.php',
	'CakeResponse' => '/var/www/c-it-loci/lib/Cake/Network/CakeResponse.php',
	'CakeEvent' => '/var/www/c-it-loci/lib/Cake/Event/CakeEvent.php',
	'CakeEventManager' => '/var/www/c-it-loci/lib/Cake/Event/CakeEventManager.php',
	'AssetDispatcher' => '/var/www/c-it-loci/lib/Cake/Routing/Filter/AssetDispatcher.php',
	'DispatcherFilter' => '/var/www/c-it-loci/lib/Cake/Routing/DispatcherFilter.php',
	'CacheDispatcher' => '/var/www/c-it-loci/lib/Cake/Routing/Filter/CacheDispatcher.php',
	'Router' => '/var/www/c-it-loci/lib/Cake/Routing/Router.php',
	'CakeRoute' => '/var/www/c-it-loci/lib/Cake/Routing/Route/CakeRoute.php',
	'PluginShortRoute' => '/var/www/c-it-loci/lib/Cake/Routing/Route/PluginShortRoute.php',
	'RegionController' => '/var/www/c-it-loci/app/Controller/RegionController.php',
	'AppController' => '/var/www/c-it-loci/app/Controller/AppController.php',
	'Controller' => '/var/www/c-it-loci/lib/Cake/Controller/Controller.php',
	'Object' => '/var/www/c-it-loci/lib/Cake/Core/Object.php',
	'ComponentCollection' => '/var/www/c-it-loci/lib/Cake/Controller/ComponentCollection.php',
	'SessionComponent' => '/var/www/c-it-loci/lib/Cake/Controller/Component/SessionComponent.php',
	'Component' => '/var/www/c-it-loci/lib/Cake/Controller/Component.php',
	'RequestHandlerComponent' => '/var/www/c-it-loci/lib/Cake/Controller/Component/RequestHandlerComponent.php',
	'ClassRegistry' => '/var/www/c-it-loci/lib/Cake/Utility/ClassRegistry.php',
	'Region' => '/var/www/c-it-loci/app/Model/Region.php',
	'AppModel' => '/var/www/c-it-loci/app/Model/AppModel.php',
	'Model' => '/var/www/c-it-loci/lib/Cake/Model/Model.php',
	'BehaviorCollection' => '/var/www/c-it-loci/lib/Cake/Model/BehaviorCollection.php',
	'ConnectionManager' => '/var/www/c-it-loci/lib/Cake/Model/ConnectionManager.php',
	'Mysql' => '/var/www/c-it-loci/lib/Cake/Model/Datasource/Database/Mysql.php',
	'DboSource' => '/var/www/c-it-loci/lib/Cake/Model/Datasource/DboSource.php',
	'DataSource' => '/var/www/c-it-loci/lib/Cake/Model/Datasource/DataSource.php',
	'I18n' => '/var/www/c-it-loci/lib/Cake/I18n/I18n.php',
	'L10n' => '/var/www/c-it-loci/lib/Cake/I18n/L10n.php',
	'CakeSession' => '/var/www/c-it-loci/lib/Cake/Model/Datasource/CakeSession.php',
	'View' => '/var/www/c-it-loci/lib/Cake/View/View.php',
	'HelperCollection' => '/var/www/c-it-loci/lib/Cake/View/HelperCollection.php',
	'ViewBlock' => '/var/www/c-it-loci/lib/Cake/View/ViewBlock.php',
	'HtmlHelper' => '/var/www/c-it-loci/lib/Cake/View/Helper/HtmlHelper.php',
	'AppHelper' => '/var/www/c-it-loci/app/View/Helper/AppHelper.php',
	'Helper' => '/var/www/c-it-loci/lib/Cake/View/Helper.php',
	'FormHelper' => '/var/www/c-it-loci/lib/Cake/View/Helper/FormHelper.php',
	'SessionHelper' => '/var/www/c-it-loci/lib/Cake/View/Helper/SessionHelper.php'
)
$config = '_cake_core_'
$settings = array(
	'prefix' => '*****',
	'engine' => 'File',
	'path' => '/var/www/c-it-loci/app/tmp/cache/persistent/',
	'serialize' => true,
	'duration' => (int) 10,
	'lock' => true,
	'isWindows' => false,
	'mask' => (int) 436,
	'probability' => (int) 100,
	'groups' => array()
)
$success = false

Cache::write() - CORE/Cake/Cache/Cache.php, line 323
App::shutdown() - CORE/Cake/Core/App.php, line 899
[main] - [internal], line ??

Warning (512): _cake_core_ cache was unable to write 'method_cache' to File cache [CORE/Cake/Cache/Cache.php, line 323]

Code Context

                ),
                E_USER_WARNING
            );

$key = 'method_cache'
$value = array(
	(int) 0 => false,
	'name' => array(
		'45b989c52610ac6d773f6b83d6108190' => '`citloci`'
	)
)
$config = '_cake_core_'
$settings = array(
	'prefix' => '*****',
	'engine' => 'File',
	'path' => '/var/www/c-it-loci/app/tmp/cache/persistent/',
	'serialize' => true,
	'duration' => (int) 10,
	'lock' => true,
	'isWindows' => false,
	'mask' => (int) 436,
	'probability' => (int) 100,
	'groups' => array()
)
$success = false

Cache::write() - CORE/Cake/Cache/Cache.php, line 323
DboSource::__destruct() - CORE/Cake/Model/Datasource/DboSource.php, line 3539
[main] - [internal], line ??

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

Expression Patterns

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