C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002FV_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000177414-ENSG00000158966 CGP 9606 1:64203627-64693058
GeneTranscriptPositionBiotype
ENSG00000158966 (CACHD1)
cache domain containing 1 		ENST00000290039 (CACHD1-001) 64470792-64693058 protein_coding
ENST00000470527 (CACHD1-002) 64563677-64693058 processed_transcript
ENST00000486580 (CACHD1-004) 64664200-64666140 retained_intron
ENST00000495994 (CACHD1-003) 64505915-64693053 processed_transcript
ENSG00000177414 (UBE2U)
ubiquitin-conjugating enzyme E2U (putative) 		ENST00000371076 (UBE2U-001) 64203807-64244344 protein_coding
ENST00000371077 (UBE2U-002) 64203627-64260694 protein_coding
ENST00000464349 (UBE2U-003) 64215453-64244340 processed_transcript
ENST00000608020 (UBE2U-005) 64214815-64267368 protein_coding
ENST00000608956 (UBE2U-004) 64220864-64267249 protein_coding
ENST00000611228 (UBE2U-006) 64203627-64267368 protein_coding
CIL_0002FV_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000069733-ENSMUSG00000028532 CGP 10090 4:100478849-101029220
GeneTranscriptPositionBiotype
ENSMUSG00000028532 (Cachd1)
cache domain containing 1 		ENSMUST00000030257 (Cachd1-001) 100776675-101004544 protein_coding
ENSMUST00000097955 (Cachd1-002) 100776675-101029220 protein_coding
ENSMUST00000123475 (Cachd1-003) 100994611-101003061 processed_transcript
ENSMUST00000136430 (Cachd1-004) 100994710-101003231 processed_transcript
ENSMUSG00000069733 (Ube2u)
ubiquitin-conjugating enzyme E2U (putative) 		ENSMUST00000092730 (Ube2u-002) 100478867-100550145 protein_coding
ENSMUST00000133493 (Ube2u-001) 100478849-100550147 protein_coding
ENSMUSG00000073789 (Gm10577)
predicted gene 10577 		ENSMUST00000097954 (Gm10577-201) 101020298-101020696 protein_coding
ENSMUSG00000081553 (Ccdc50-ps)
Ccdc50 retrotransposed pseudogene 		ENSMUST00000118044 (Ccdc50-ps-001) 100567108-100568048 processed_pseudogene
ENSMUSG00000082601 (Gm12700)
predicted gene 12700 		ENSMUST00000118145 (Gm12700-001) 100581278-100581734 processed_pseudogene
ENSMUSG00000085871 (Ube2uos)
ubiquitin-conjugating enzyme E2U (putative), opposite strand 		ENSMUST00000142634 (Ube2uos-001) 100523247-100527801 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002FV_0001ENSG00000158966ENST00000290039ENST00000470527ENST00000486580ENST00000495994ENSG00000177414ENST00000371076ENST00000371077ENST00000464349ENST00000608020ENST00000608956ENST00000611228CIL_0002FV_0002ENSMUSG00000028532ENSMUST00000030257ENSMUST00000097955ENSMUST00000123475ENSMUST00000136430ENSMUSG00000069733ENSMUST00000092730ENSMUST00000133493ENSMUSG00000073789ENSMUST00000097954ENSMUSG00000081553ENSMUST00000118044ENSMUSG00000082601ENSMUST00000118145ENSMUSG00000085871ENSMUST00000142634
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002FV_0001ENSG00000158966ENST00000290039ENST00000470527ENSG00000177414ENST00000371076ENST00000371077ENST00000464349ENST00000608020ENST00000608956CIL_0002FV_0002ENSMUSG00000028532ENSMUST00000030257ENSMUST00000097955ENSMUST00000123475ENSMUST00000136430ENSMUSG00000069733ENSMUST00000092730ENSMUST00000133493ENSMUSG00000073789ENSMUST00000097954ENSMUSG00000081553ENSMUST00000118044ENSMUSG00000082601ENSMUST00000118145ENSMUSG00000085871ENSMUST00000142634
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000158966 ENST00000290039 3.764±0.00 1.444±0.00 N/A 1.951±0.34 5.331±0.00 2.598±0.00 0.591±0.35 1.303±0.00 0.251±0.00 0.833±0.18 N/A 4.254±3.63 2.622±0.08 2.420±0.50
ENST00000470527 N/A N/A N/A N/A N/A N/A N/A 0.077±0.00 N/A N/A N/A N/A N/A N/A
ENST00000486580 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495994 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000177414 ENST00000371076 N/A N/A N/A N/A N/A N/A 0.181±0.00 N/A N/A N/A N/A N/A N/A 1.971±0.34
ENST00000371077 N/A 0.010±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.525±0.00
ENST00000464349 N/A N/A N/A N/A N/A N/A 0.144±0.00 N/A N/A N/A N/A N/A 0.142±0.00 N/A
ENST00000608020 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.066±0.02 N/A
ENST00000608956 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.898±1.64
ENST00000611228 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000028532 ENSMUST00000030257 11.198±0.71 2.424±0.28 4.929±0.13 12.155±7.71 4.356±0.59 14.186±0.98 0.654±0.21 7.341±1.20 0.298±0.14 6.438±0.39 0.799±0.12 10.844±2.50 1.723±0.78 0.646±0.43
ENSMUST00000097955 3.666±0.48 0.601±0.00 N/A 3.394±1.73 1.739±0.82 N/A 0.290±0.13 2.349±0.69 N/A N/A 0.220±0.00 3.725±0.00 0.603±0.10 0.490±0.00
ENSMUST00000123475 N/A N/A N/A N/A N/A N/A N/A N/A 6.696±0.00 N/A N/A N/A N/A N/A
ENSMUST00000136430 N/A 4.095±0.44 N/A N/A 6.972±0.10 24.585±2.71 N/A 9.464±0.00 1.445±0.80 10.880±0.00 N/A 17.182±1.73 N/A 2.300±0.32
ENSMUSG00000069733 ENSMUST00000092730 0.030±0.00 N/A 0.010±0.00 0.040±0.00 0.083±0.00 0.186±0.00 N/A N/A 0.196±0.00 0.045±0.00 N/A 0.358±0.25 0.058±0.02 44.555±0.00
ENSMUST00000133493 0.087±0.00 N/A 0.043±0.00 0.064±0.01 N/A N/A N/A 1.029±0.16 0.494±0.41 N/A N/A 0.385±0.15 1.249±0.17 19.628±3.72
ENSMUSG00000073789 ENSMUST00000097954 N/A N/A N/A 0.218±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000081553 ENSMUST00000118044 N/A N/A N/A 0.013±0.00 0.126±0.00 N/A N/A N/A 0.007±0.00 N/A N/A N/A N/A 0.046±0.00
ENSMUSG00000082601 ENSMUST00000118145 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.251±0.00 N/A
ENSMUSG00000085871 ENSMUST00000142634 N/A N/A N/A 0.016±0.00 N/A 0.236±0.13 0.267±0.16 0.073±0.00 N/A N/A N/A N/A 0.012±0.00 N/A

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