C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002I8_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000090802-ENSDARG00000024212 CGP 7955 16:54766749-54784488
GeneTranscriptPositionBiotype
ENSDARG00000024212 (PAQR8 (1 of 2))
progestin and adipoQ receptor family member VIII 		ENSDART00000034492 (PAQR8 (1 of 2)-201) 54782353-54784488 protein_coding
ENSDARG00000090802 (mcm3)
MCM3 minichromosome maintenance deficient 3 (S. cerevisiae) 		ENSDART00000121535 (mcm3-201) 54766749-54780384 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0002I8_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000112118-ENSG00000170915 CGP 9606 6:52264009-52407777
GeneTranscriptPositionBiotype
ENSG00000112118 (MCM3)
minichromosome maintenance complex component 3 		ENST00000229854 (MCM3-006) 52264009-52284751 protein_coding
ENST00000419835 (MCM3-201) 52264014-52284881 protein_coding
ENST00000421471 (MCM3-004) 52264621-52273775 protein_coding
ENST00000476448 (MCM3-003) 52275982-52279452 processed_transcript
ENST00000596288 (MCM3-001) 52264009-52284837 protein_coding
ENST00000596983 (MCM3-005) 52282111-52284881 nonsense_mediated_decay
ENST00000616552 (MCM3-202) 52264014-52284881 protein_coding
ENSG00000170915 (PAQR8)
progestin and adipoQ receptor family member VIII 		ENST00000360726 (PAQR8-002) 52362446-52407691 protein_coding
ENST00000442253 (PAQR8-001) 52362128-52407777 protein_coding
ENST00000512121 (PAQR8-003) 52361421-52403549 protein_coding

Homo sapiens Ensembl (GRCh38)

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CIL_0002I8_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000041859-ENSMUSG00000025931 CGP 10090 1:20802968-20939650
GeneTranscriptPositionBiotype
ENSMUSG00000025931 (Paqr8)
progestin and adipoQ receptor family member VIII 		ENSMUST00000068880 (Paqr8-002) 20917840-20939055 protein_coding
ENSMUST00000167119 (Paqr8-201) 20917874-20935749 protein_coding
ENSMUST00000187651 (Paqr8-003) 20922259-20935756 protein_coding
ENSMUST00000189400 (Paqr8-001) 20890606-20939650 protein_coding
ENSMUSG00000041859 (Mcm3)
minichromosome maintenance deficient 3 (S. cerevisiae) 		ENSMUST00000053266 (Mcm3-001) 20802968-20820312 protein_coding
ENSMUST00000185296 (Mcm3-002) 20802973-20820260 retained_intron
ENSMUST00000188112 (Mcm3-005) 20803006-20803721 retained_intron
ENSMUST00000190421 (Mcm3-004) 20804686-20805940 retained_intron
ENSMUST00000191061 (Mcm3-003) 20803165-20804933 retained_intron
ENSMUSG00000077314 (Gm24171)
predicted gene, 24171 		ENSMUST00000104126 (Gm24171-201) 20915410-20915540 snoRNA
ENSMUSG00000097934 (6720483E21Rik)
RIKEN cDNA 6720483E21 gene 		ENSMUST00000181654 (6720483E21Rik-001) 20888650-20890473 lincRNA
ENSMUSG00000099714 (RP23-191A12.1)
predicted gene, 20587 		ENSMUST00000186367 (RP23-191A12.1-001) 20821331-20822516 processed_pseudogene
ENSMUSG00000102121 (RP23-191A12.2)
predicted gene 28065 		ENSMUST00000185290 (RP23-191A12.2-001) 20836661-20839689 lincRNA

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002I8_0001ENSDARG00000024212ENSDART00000034492ENSDARG00000090802ENSDART00000121535CIL_0002I8_0002ENSG00000112118ENST00000229854ENST00000419835ENST00000421471ENST00000476448ENST00000596288ENST00000596983ENST00000616552ENSG00000170915ENST00000360726ENST00000442253ENST00000512121CIL_0002I8_0003ENSMUSG00000025931ENSMUST00000068880ENSMUST00000167119ENSMUST00000187651ENSMUST00000189400ENSMUSG00000041859ENSMUST00000053266ENSMUST00000185296ENSMUST00000188112ENSMUST00000190421ENSMUST00000191061ENSMUSG00000077314ENSMUST00000104126ENSMUSG00000097934ENSMUST00000181654ENSMUSG00000099714ENSMUST00000186367ENSMUSG00000102121ENSMUST00000185290
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002I8_0001ENSDARG00000024212ENSDART00000034492ENSDARG00000090802ENSDART00000121535CIL_0002I8_0002ENSG00000112118ENST00000229854ENST00000419835ENST00000421471ENST00000476448ENST00000596288ENST00000616552ENSG00000170915ENST00000360726ENST00000442253CIL_0002I8_0003ENSMUSG00000025931ENSMUST00000068880ENSMUST00000167119ENSMUST00000187651ENSMUST00000189400ENSMUSG00000041859ENSMUST00000053266ENSMUST00000191061ENSMUSG00000077314ENSMUST00000104126ENSMUSG00000097934ENSMUST00000181654ENSMUSG00000099714ENSMUST00000186367ENSMUSG00000102121ENSMUST00000185290
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000024212 ENSDART00000034492 N/A N/A N/A 0.281±0.03 N/A N/A 0.214±0.00 0.051±0.00 N/A N/A N/A N/A N/A N/A
ENSDARG00000090802 ENSDART00000121535 N/A N/A N/A 0.141±0.02 N/A N/A 0.330±0.28 0.836±0.38 0.013±0.00 N/A 0.257±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000112118 ENST00000229854 8.718±0.00 15.667±0.00 2.564±0.00 4.088±2.05 6.330±0.71 5.719±1.12 3.822±3.12 6.811±3.60 3.081±1.25 6.044±3.89 3.260±0.00 24.675±15.90 28.532±5.32 14.937±3.20
ENST00000419835 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.565±0.00 N/A N/A N/A
ENST00000421471 N/A N/A N/A N/A N/A 4.339±0.00 N/A N/A N/A N/A N/A 41.852±0.00 26.832±0.00 10.851±0.00
ENST00000476448 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.064±0.00 N/A N/A N/A
ENST00000596288 3.099±0.00 N/A N/A N/A 3.863±0.00 2.047±0.50 N/A 3.954±0.00 3.963±0.00 2.908±0.00 N/A 3.133±0.00 N/A 2.971±0.00
ENST00000596983 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000616552 N/A N/A N/A N/A N/A N/A 0.796±0.00 N/A N/A N/A N/A 14.791±0.00 N/A N/A
ENSG00000170915 ENST00000360726 1.426±0.00 0.226±0.00 N/A 12.322±10.51 0.295±0.00 2.176±0.66 0.336±0.15 0.541±0.24 0.058±0.00 1.816±0.00 0.010±0.00 4.902±2.96 3.381±0.93 2.171±0.00
ENST00000442253 0.330±0.00 1.559±0.00 0.887±0.00 8.980±0.00 1.112±0.59 1.203±0.35 0.538±0.00 2.494±0.00 0.223±0.11 N/A 0.091±0.00 2.904±0.99 3.178±0.00 3.273±0.00
ENST00000512121 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025931 ENSMUST00000068880 0.357±0.11 6.698±0.00 2.009±0.20 5.547±3.81 0.316±0.03 N/A 0.226±0.02 0.151±0.04 0.083±0.03 N/A 0.069±0.03 2.751±0.40 0.886±0.54 4.024±0.83
ENSMUST00000167119 1.160±0.00 16.352±6.97 N/A N/A 1.829±0.48 9.974±3.77 N/A 0.649±0.25 0.193±0.13 12.624±5.10 N/A 16.136±6.64 N/A N/A
ENSMUST00000187651 2.136±0.59 39.768±9.73 N/A 5.904±1.36 0.768±0.46 4.432±1.27 0.629±0.14 0.621±0.16 0.161±0.12 6.206±0.00 0.091±0.00 17.032±6.15 0.414±0.00 9.715±0.95
ENSMUST00000189400 1.012±0.55 8.260±3.08 2.957±0.33 4.456±0.77 0.354±0.08 3.781±0.17 0.167±0.10 0.253±0.05 0.076±0.05 6.122±1.21 0.094±0.03 4.526±1.63 0.884±0.34 1.074±0.40
ENSMUSG00000041859 ENSMUST00000053266 4.827±2.83 3.489±0.99 2.647±0.22 4.320±2.65 4.258±0.86 4.275±1.66 1.095±0.28 1.366±0.36 22.020±26.04 4.561±0.72 0.992±0.11 11.622±5.57 26.540±25.46 3.749±0.98
ENSMUST00000185296 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000188112 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000190421 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000191061 N/A N/A N/A N/A N/A 3.274±0.00 N/A N/A N/A N/A 0.942±0.27 N/A N/A N/A
ENSMUSG00000077314 ENSMUST00000104126 N/A N/A N/A 5.624±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000097934 ENSMUST00000181654 0.082±0.03 0.490±0.24 0.692±0.00 0.263±0.14 0.118±0.07 0.175±0.00 0.063±0.00 0.040±0.00 0.049±0.03 0.229±0.03 0.024±0.00 0.374±0.19 0.080±0.05 0.166±0.08
ENSMUSG00000099714 ENSMUST00000186367 N/A N/A N/A 0.026±0.00 N/A N/A N/A N/A 0.005±0.00 N/A N/A 0.104±0.10 0.005±0.00 0.075±0.01
ENSMUSG00000102121 ENSMUST00000185290 N/A 0.380±0.17 N/A N/A N/A N/A N/A N/A N/A 0.255±0.11 N/A 0.194±0.18 N/A N/A

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