C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002JF_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000119965-ENSG00000179988 CGP 9606 10:122930903-122997513
GeneTranscriptPositionBiotype
ENSG00000095574 (IKZF5)
IKAROS family zinc finger 5 (Pegasus) 		ENST00000368886 (IKZF5-001) 122990806-123008817 protein_coding
ENST00000469821 (IKZF5-004) 122996147-123008773 processed_transcript
ENST00000479103 (IKZF5-002) 122998227-123008812 processed_transcript
ENST00000496605 (IKZF5-003) 122995994-123008807 processed_transcript
ENST00000617859 (IKZF5-201) 122990808-123008687 protein_coding
ENSG00000119965 (C10orf88)
chromosome 10 open reading frame 88 		ENST00000368891 (C10orf88-002) 122930903-122954311 processed_transcript
ENST00000462191 (C10orf88-004) 122932409-122933459 processed_transcript
ENST00000470158 (C10orf88-003) 122932603-122952007 processed_transcript
ENST00000481909 (C10orf88-001) 122931508-122954403 protein_coding

Homo sapiens Ensembl (GRCh38)

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Structures from Ensembl
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CIL_0002JF_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000040177-ENSMUSG00000063179 CGP 10090 7:131342718-131387839
GeneTranscriptPositionBiotype
ENSMUSG00000040177 (2310057M21Rik)
RIKEN cDNA 2310057M21 gene 		ENSMUST00000059438 (2310057M21Rik-201) 131342718-131362698 protein_coding
ENSMUSG00000063179 (Pstk)
phosphoseryl-tRNA kinase 		ENSMUST00000075610 (Pstk-001) 131371141-131387839 protein_coding
ENSMUST00000124672 (Pstk-003) 131373035-131387833 retained_intron
ENSMUST00000128092 (Pstk-007) 131383925-131387836 processed_transcript
ENSMUST00000133284 (Pstk-006) 131384498-131387832 processed_transcript
ENSMUST00000141914 (Pstk-004) 131371157-131374263 processed_transcript
ENSMUST00000145114 (Pstk-002) 131371146-131387836 nonsense_mediated_decay
ENSMUST00000148533 (Pstk-005) 131384257-131387727 retained_intron

Mus musculus Ensembl (GRCm38)

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Structures from Ensembl
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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002JF_0001ENSG00000095574ENST00000368886ENST00000469821ENST00000479103ENST00000496605ENST00000617859ENSG00000119965ENST00000368891ENST00000462191ENST00000470158ENST00000481909CIL_0002JF_0002ENSMUSG00000040177ENSMUST00000059438ENSMUSG00000063179ENSMUST00000075610ENSMUST00000124672ENSMUST00000128092ENSMUST00000133284ENSMUST00000141914ENSMUST00000145114ENSMUST00000148533
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002JF_0001ENSG00000095574ENST00000368886ENST00000617859ENSG00000119965ENST00000368891ENST00000481909CIL_0002JF_0002ENSMUSG00000040177ENSMUST00000059438ENSMUSG00000063179ENSMUST00000075610ENSMUST00000124672ENSMUST00000141914ENSMUST00000145114
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000095574 ENST00000368886 3.305±0.00 N/A N/A 4.134±1.84 2.561±0.00 2.279±0.78 N/A N/A 0.839±0.10 3.734±0.00 N/A 1.899±1.14 1.492±0.14 4.860±0.78
ENST00000469821 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479103 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496605 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000617859 N/A N/A N/A N/A N/A N/A 1.128±0.00 N/A N/A N/A N/A N/A 1.452±0.00 N/A
ENSG00000119965 ENST00000368891 1.444±0.00 2.322±0.00 N/A 1.877±1.05 N/A N/A N/A N/A 0.789±0.00 N/A 1.309±0.00 1.721±0.01 0.986±0.26 3.458±0.00
ENST00000462191 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470158 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000481909 N/A N/A N/A 1.218±0.00 1.671±0.00 1.302±0.00 1.484±0.00 0.660±0.00 0.765±0.00 N/A N/A 3.441±0.00 1.296±0.00 5.940±0.95
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000040177 ENSMUST00000059438 1.943±0.22 1.708±0.35 2.786±0.18 2.867±0.82 2.011±0.29 1.208±0.17 2.112±0.30 1.839±0.35 1.976±1.19 2.105±0.53 3.625±0.71 2.562±0.71 3.725±1.54 2.817±0.79
ENSMUSG00000063179 ENSMUST00000075610 5.784±0.42 N/A 9.915±2.21 3.490±0.33 4.849±1.70 6.419±2.80 4.563±1.40 7.545±1.53 5.141±1.42 2.894±0.59 11.470±0.85 9.098±3.11 3.271±2.51 1.593±0.42
ENSMUST00000124672 N/A N/A 2.393±0.00 1.489±0.26 N/A N/A N/A N/A 0.755±0.03 N/A 0.933±0.00 3.026±0.22 0.645±0.16 0.489±0.00
ENSMUST00000128092 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000133284 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141914 15.775±1.69 40.367±9.63 9.781±0.00 8.088±1.20 17.854±1.22 17.326±3.79 21.234±1.11 9.437±2.21 7.972±1.87 9.211±0.96 14.389±2.06 21.755±8.56 8.120±2.34 2.672±0.71
ENSMUST00000145114 N/A 6.913±2.54 N/A N/A 4.163±2.25 5.524±2.83 N/A 1.339±0.00 3.115±0.45 2.100±0.00 N/A 7.668±3.02 N/A 1.029±0.00
ENSMUST00000148533 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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