C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002JR_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000059888-ENSDARG00000092644 CGP 7955 16:54559833-54708191
GeneTranscriptPositionBiotype
ENSDARG00000059888 ()
argonaute RISC catalytic component 3 		ENSDART00000083777 () 54559833-54596672 protein_coding
ENSDARG00000092644 (AGO1)
argonaute RISC catalytic component 1 		ENSDART00000138318 (AGO1-201) 54642350-54689222 protein_coding
ENSDART00000156255 (AGO1-001) 54642280-54708191 protein_coding
CIL_0002JR_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000028842-ENSMUSG00000041530 CGP 10090 4:126331704-126468583
GeneTranscriptPositionBiotype
ENSMUSG00000028842 (Ago3)
argonaute RISC catalytic subunit 3 		ENSMUST00000069097 (Ago3-001) 126332732-126429556 protein_coding
ENSMUST00000123233 (Ago3-006) 126407696-126429541 processed_transcript
ENSMUST00000127831 (Ago3-003) 126345577-126350902 protein_coding
ENSMUST00000132123 (Ago3-002) 126331704-126350320 protein_coding
ENSMUST00000151179 (Ago3-004) 126375678-126404294 processed_transcript
ENSMUST00000155645 (Ago3-005) 126397956-126404335 processed_transcript
ENSMUSG00000041530 (Ago1)
argonaute RISC catalytic subunit 1 		ENSMUST00000097888 (Ago1-001) 126435012-126468583 protein_coding
ENSMUST00000127800 (Ago1-002) 126438321-126461782 nonsense_mediated_decay
ENSMUST00000149425 (Ago1-003) 126459315-126460125 retained_intron
ENSMUST00000156533 (Ago1-004) 126442600-126443361 retained_intron
ENSMUST00000176315 (Ago1-005) 126439503-126459207 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002JR_0001ENSDARG00000059888ENSDART00000083777ENSDARG00000092644ENSDART00000138318ENSDART00000156255CIL_0002JR_0002ENSMUSG00000028842ENSMUST00000069097ENSMUST00000123233ENSMUST00000127831ENSMUST00000132123ENSMUST00000151179ENSMUST00000155645ENSMUSG00000041530ENSMUST00000097888ENSMUST00000127800ENSMUST00000149425ENSMUST00000156533ENSMUST00000176315
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002JR_0001ENSDARG00000059888ENSDART00000083777ENSDARG00000092644ENSDART00000138318ENSDART00000156255CIL_0002JR_0002ENSMUSG00000028842ENSMUST00000069097ENSMUST00000123233ENSMUSG00000041530ENSMUST00000097888ENSMUST00000176315
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000059888 ENSDART00000083777 N/A N/A N/A 1.376±0.00 N/A N/A 0.956±0.71 N/A 0.334±0.00 N/A 0.336±0.00 N/A N/A N/A
ENSDARG00000092644 ENSDART00000138318 N/A N/A N/A N/A N/A N/A N/A 0.069±0.00 N/A N/A 0.059±0.00 N/A N/A N/A
ENSDART00000156255 N/A N/A N/A 0.177±0.00 N/A N/A 0.293±0.00 N/A 0.055±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000028842 ENSMUST00000069097 1.524±0.58 1.438±0.19 2.357±0.11 1.945±1.11 1.528±0.19 1.085±0.12 0.960±0.07 1.223±0.20 0.766±0.22 2.004±0.12 0.368±0.17 1.813±0.57 1.093±0.12 0.883±0.07
ENSMUST00000123233 8.299±0.59 10.437±2.84 N/A N/A 9.885±2.57 5.457±2.09 N/A 4.941±0.26 1.584±0.10 7.684±1.72 N/A 12.982±5.15 N/A 6.207±0.74
ENSMUST00000127831 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132123 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151179 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155645 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000041530 ENSMUST00000097888 3.582±1.81 3.665±2.15 4.864±1.04 16.301±10.07 2.561±0.68 2.995±1.54 1.707±0.36 2.184±0.73 1.876±0.83 5.634±2.85 1.649±0.27 5.778±2.95 2.337±1.87 0.715±0.34
ENSMUST00000127800 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149425 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156533 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000176315 N/A N/A N/A N/A 4.172±0.00 2.432±0.00 N/A N/A N/A N/A N/A 5.954±1.43 N/A N/A

Loading