C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002KM_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000045493-ENSDARG00000033443 CGP 7955 4:22053247-22071816
GeneTranscriptPositionBiotype
ENSDARG00000033443 (mdm2)
transformed 3T3 cell double minute 2 homolog (mouse) 		ENSDART00000040435 (mdm2-201) 22062972-22070531 protein_coding
ENSDART00000077854 (mdm2-005) 22061379-22070939 protein_coding
ENSDART00000122675 (mdm2-202) 22062986-22071816 protein_coding
ENSDART00000132214 (mdm2-003) 22062997-22065323 processed_transcript
ENSDART00000132880 (mdm2-002) 22062894-22068214 processed_transcript
ENSDART00000138359 (mdm2-004) 22068232-22070226 processed_transcript
ENSDART00000139543 (mdm2-007) 22062794-22068141 protein_coding
ENSDART00000143747 (mdm2-006) 22068802-22070050 retained_intron
ENSDARG00000045493 (slc35e3)
solute carrier family 35, member E3 		ENSDART00000066909 (slc35e3-001) 22053247-22058085 protein_coding
ENSDARG00000094023 (si:dkeyp-79f4.1)
si:dkeyp-79f4.1 		ENSDART00000131433 (si:dkeyp-79f4.1-001) 22058434-22059200 processed_transcript

Danio rerio Ensembl (Zv9)

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CIL_0002KM_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000175782-ENSG00000135679 CGP 9606 12:68746106-68850686
GeneTranscriptPositionBiotype
ENSG00000175782 (SLC35E3)
solute carrier family 35, member E3 		ENST00000319429 (SLC35E3-002) 68747987-68760196 processed_transcript
ENST00000398004 (SLC35E3-001) 68746106-68781467 protein_coding
ENST00000399333 (SLC35E3-005) 68792412-68793964 processed_transcript
ENST00000431174 (SLC35E3-003) 68752089-68767245 protein_coding
ENST00000538043 (SLC35E3-004) 68752151-68793728 processed_transcript
ENSG00000256325 (RP11-611O2.1)
 ENST00000544710 (RP11-611O2.1-001) 68828118-68828553 antisense
ENSG00000256664 (RP11-611O2.3)
 ENST00000537570 (RP11-611O2.3-001) 68841946-68842384 processed_pseudogene
ENSG00000256678 (RP11-611O2.2)
 ENST00000541551 (RP11-611O2.2-001) 68805011-68805479 processed_pseudogene
ENSG00000257181 (RP11-611O2.5)
 ENST00000553141 (RP11-611O2.5-001) 68841288-68843237 antisense

Homo sapiens Ensembl (GRCh38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002KM_0001ENSDARG00000033443ENSDART00000040435ENSDART00000077854ENSDART00000122675ENSDART00000132214ENSDART00000132880ENSDART00000138359ENSDART00000139543ENSDART00000143747ENSDARG00000045493ENSDART00000066909ENSDARG00000094023ENSDART00000131433CIL_0002KM_0002ENSG00000175782ENST00000319429ENST00000398004ENST00000399333ENST00000431174ENST00000538043ENSG00000256325ENST00000544710ENSG00000256664ENST00000537570ENSG00000256678ENST00000541551ENSG00000257181ENST00000553141
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002KM_0001ENSDARG00000033443ENSDART00000040435ENSDART00000077854ENSDART00000122675ENSDART00000139543ENSDARG00000045493ENSDART00000066909ENSDARG00000094023ENSDART00000131433CIL_0002KM_0002ENSG00000175782ENST00000319429ENST00000398004ENST00000431174ENSG00000256325ENST00000544710ENSG00000256664ENST00000537570ENSG00000256678ENST00000541551ENSG00000257181ENST00000553141
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000033443 ENSDART00000040435 N/A N/A N/A N/A N/A N/A 3.566±0.00 7.047±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000077854 N/A N/A N/A 3.431±0.00 N/A N/A 5.746±0.83 8.677±2.82 0.449±0.00 N/A 3.648±0.00 N/A N/A N/A
ENSDART00000122675 N/A N/A N/A 6.446±1.46 N/A N/A 4.977±2.46 2.092±1.15 0.743±0.00 N/A 3.177±0.00 N/A N/A N/A
ENSDART00000132214 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000132880 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000138359 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000139543 N/A N/A N/A 13.605±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000143747 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000045493 ENSDART00000066909 N/A N/A N/A 4.123±0.65 N/A N/A 4.153±1.30 3.084±1.28 4.728±0.00 N/A 1.739±0.00 N/A N/A N/A
ENSDARG00000094023 ENSDART00000131433 N/A N/A N/A 2.604±0.83 N/A N/A 4.824±3.03 6.433±0.00 0.339±0.00 N/A 0.449±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000175782 ENST00000319429 N/A N/A N/A N/A N/A N/A N/A N/A 2.500±0.00 N/A 2.098±0.00 N/A N/A N/A
ENST00000398004 0.619±0.00 1.153±0.00 0.146±0.00 0.831±0.49 0.472±0.20 0.321±0.12 0.218±0.17 0.464±0.25 0.293±0.02 0.373±0.02 0.174±0.10 0.616±0.40 0.455±0.28 0.583±0.04
ENST00000399333 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000431174 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.864±0.00 N/A
ENST00000538043 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000256325 ENST00000544710 0.026±0.00 0.145±0.00 N/A N/A 0.043±0.00 N/A N/A N/A 0.085±0.00 0.139±0.00 N/A 0.186±0.14 0.221±0.00 0.141±0.01
ENSG00000256664 ENST00000537570 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 27.021±0.00
ENSG00000256678 ENST00000541551 N/A N/A N/A 0.219±0.00 N/A N/A N/A 0.478±0.43 0.353±0.00 N/A 0.044±0.00 N/A N/A 1.483±0.82
ENSG00000257181 ENST00000553141 N/A N/A N/A N/A N/A N/A 6.220±0.00 N/A N/A N/A 19.749±0.00 32.821±0.00 N/A N/A

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