C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002LA_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000101447-ENSG00000101452 CGP 9606 20:38926312-39039723
GeneTranscriptPositionBiotype
ENSG00000101447 (FAM83D)
family with sequence similarity 83, member D 		ENST00000217429 (FAM83D-201) 38926312-38953056 protein_coding
ENST00000619304 (FAM83D-001) 38926312-38953106 protein_coding
ENST00000619850 (FAM83D-002) 38926426-38953106 protein_coding
ENSG00000101452 (DHX35)
DEAH (Asp-Glu-Ala-His) box polypeptide 35 		ENST00000252011 (DHX35-001) 38962335-39039723 protein_coding
ENST00000373323 (DHX35-008) 38962344-39038847 protein_coding
ENST00000373325 (DHX35-002) 38962299-39039721 protein_coding
ENST00000449559 (DHX35-006) 39021873-39038646 protein_coding
ENST00000482619 (DHX35-007) 39030360-39038636 retained_intron
ENST00000484417 (DHX35-003) 38962360-39039721 nonsense_mediated_decay
ENST00000493450 (DHX35-004) 39029178-39039723 retained_intron
ENSG00000223864 (NPM1P19)
nucleophosmin 1 (nucleolar phosphoprotein B23, numatrin) pseudogene 19 		ENST00000450070 (NPM1P19-001) 38977711-38978422 processed_pseudogene
ENSG00000261431 (RP4-616B8.4)
 ENST00000570096 (RP4-616B8.4-001) 38961925-38962111 antisense
ENSG00000274825 (RP4-616B8.5)
 ENST00000620080 (RP4-616B8.5-001) 38955910-38956547 lincRNA
ENSG00000277581 (RP4-616B8.6)
 ENST00000615559 (RP4-616B8.6-001) 38962472-38962993 sense_intronic
CIL_0002LA_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000027654-ENSMUSG00000027655 CGP 10090 2:158768093-158858214
GeneTranscriptPositionBiotype
ENSMUSG00000027654 (Fam83d)
family with sequence similarity 83, member D 		ENSMUST00000029183 (Fam83d-001) 158768093-158786637 protein_coding
ENSMUST00000151801 (Fam83d-002) 158781408-158786637 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002LA_0001ENSG00000101447ENST00000217429ENST00000619304ENST00000619850ENSG00000101452ENST00000252011ENST00000373323ENST00000373325ENST00000449559ENST00000482619ENST00000484417ENST00000493450ENSG00000223864ENST00000450070ENSG00000261431ENST00000570096ENSG00000274825ENST00000620080ENSG00000277581ENST00000615559CIL_0002LA_0002ENSMUSG00000027654ENSMUST00000029183ENSMUST00000151801
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002LA_0001ENSG00000101447ENST00000217429ENST00000619850ENSG00000101452ENST00000252011ENST00000373323ENST00000373325ENST00000484417ENST00000493450ENSG00000223864ENST00000450070ENSG00000261431ENST00000570096ENSG00000274825ENST00000620080ENSG00000277581ENST00000615559CIL_0002LA_0002ENSMUSG00000027654ENSMUST00000029183ENSMUST00000151801
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000101447 ENST00000217429 0.241±0.00 0.882±0.00 N/A 1.018±0.00 0.058±0.00 3.519±1.05 0.213±0.19 0.398±0.27 0.632±0.00 2.541±0.00 N/A 6.066±6.85 2.663±1.25 4.414±0.69
ENST00000619304 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000619850 N/A 0.158±0.00 0.142±0.00 0.548±0.00 3.039±2.78 N/A 0.070±0.00 1.081±0.00 3.431±0.00 0.104±0.00 N/A 3.963±2.01 1.981±0.00 N/A
ENSG00000101452 ENST00000252011 1.866±0.00 1.288±0.00 N/A 0.996±0.18 1.565±0.10 N/A 3.265±0.00 N/A 0.378±0.00 1.284±0.26 N/A 2.058±0.77 1.050±0.11 2.978±0.00
ENST00000373323 N/A N/A 0.221±0.00 0.667±0.00 N/A N/A N/A N/A 0.428±0.00 N/A N/A N/A N/A N/A
ENST00000373325 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.081±0.00 N/A
ENST00000449559 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482619 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484417 N/A N/A 0.231±0.00 N/A N/A 0.753±0.11 0.293±0.00 2.806±0.00 N/A N/A N/A 2.175±1.06 0.668±0.00 2.072±0.00
ENST00000493450 N/A N/A N/A N/A 1.075±0.00 N/A N/A N/A 0.601±0.00 N/A N/A 0.392±0.00 N/A N/A
ENSG00000223864 ENST00000450070 N/A N/A N/A 0.048±0.00 N/A 0.305±0.28 0.015±0.00 N/A 0.055±0.00 N/A 0.015±0.00 0.416±0.38 N/A 0.020±0.00
ENSG00000261431 ENST00000570096 N/A N/A N/A 2.426±0.00 N/A N/A N/A 0.209±0.00 0.196±0.00 N/A N/A 0.461±0.00 N/A 0.583±0.23
ENSG00000274825 ENST00000620080 0.048±0.00 0.410±0.00 N/A 0.347±0.00 0.120±0.00 0.381±0.00 N/A 0.197±0.00 0.123±0.08 0.064±0.00 N/A 0.201±0.00 N/A 0.204±0.00
ENSG00000277581 ENST00000615559 N/A N/A N/A N/A N/A 0.324±0.00 0.091±0.00 N/A 0.130±0.00 0.044±0.00 0.224±0.00 N/A 0.185±0.00 0.394±0.05
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027654 ENSMUST00000029183 2.412±0.57 1.476±0.28 10.415±1.79 4.701±3.92 0.991±0.30 17.438±0.72 0.143±0.03 0.245±0.11 4.636±4.64 1.997±1.06 0.780±0.14 13.074±6.61 12.910±4.89 3.490±1.39
ENSMUST00000151801 N/A N/A N/A 0.185±0.16 0.096±0.00 N/A N/A 0.082±0.07 0.827±0.51 0.136±0.00 0.156±0.00 0.594±0.08 N/A 0.044±0.00

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