C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002ML_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000196600-ENSG00000149742 CGP 9606 11:63163776-63410294
GeneTranscriptPositionBiotype
ENSG00000149742 (SLC22A9)
solute carrier family 22 (organic anion transporter), member 9 		ENST00000279178 (SLC22A9-001) 63369808-63410294 protein_coding
ENST00000536333 (SLC22A9-002) 63369789-63409958 nonsense_mediated_decay
ENSG00000184999 (SLC22A10)
solute carrier family 22, member 10 		ENST00000332793 (SLC22A10-004) 63290164-63311432 protein_coding
ENST00000525620 (SLC22A10-007) 63137867-63369718 processed_transcript
ENST00000526800 (SLC22A10-005) 63290308-63311101 protein_coding
ENST00000532724 (SLC22A10-003) 63290299-63304751 nonsense_mediated_decay
ENST00000533176 (SLC22A10-006) 63290092-63291622 processed_transcript
ENST00000533483 (SLC22A10-001) 63289900-63311771 nonsense_mediated_decay
ENSG00000196600 (SLC22A25)
solute carrier family 22, member 25 		ENST00000306494 (SLC22A25-001) 63163776-63229652 protein_coding
ENST00000525295 (SLC22A25-004) 63163830-63229652 nonsense_mediated_decay
ENST00000527057 (SLC22A25-005) 63163827-63229647 nonsense_mediated_decay
ENST00000528239 (SLC22A25-002) 63163827-63229650 nonsense_mediated_decay
ENSG00000256181 (AP000438.4)
 ENST00000538772 (AP000438.4-001) 63265836-63266256 unprocessed_pseudogene
ENSG00000256847 (CCND2P1)
cyclin D2 pseudogene 1 		ENST00000539268 (CCND2P1-001) 63243085-63244004 processed_pseudogene
ENSG00000256863 (RP11-959F10.6)
 ENST00000538233 (RP11-959F10.6-001) 63237957-63239114 unprocessed_pseudogene
CIL_0002ML_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000024757-ENSMUSG00000053303 CGP 10090 19:7673061-7802667
GeneTranscriptPositionBiotype
ENSMUSG00000024757 (Slc22a19)
solute carrier family 22 (organic anion transporter), member 19 		ENSMUST00000025666 (Slc22a19-001) 7673061-7711310 protein_coding
ENSMUST00000138317 (Slc22a19-003) 7682277-7711279 retained_intron
ENSMUST00000141771 (Slc22a19-002) 7706682-7711310 retained_intron
ENSMUSG00000053303 (Slc22a26)
solute carrier family 22 (organic cation transporter), member 26 		ENSMUST00000065634 (Slc22a26-001) 7781980-7802667 protein_coding
ENSMUST00000120522 (Slc22a26-002) 7781041-7802578 protein_coding
ENSMUSG00000081596 (Gm15968)
predicted gene 15968 		ENSMUST00000119342 (Gm15968-001) 7703946-7705113 processed_pseudogene
ENSMUSG00000083160 (Gm15967)
predicted gene 15967 		ENSMUST00000120027 (Gm15967-001) 7695899-7697014 processed_pseudogene
CIL_0002ML_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000053303-ENSMUSG00000067656 CGP 10090 19:7781041-7966027
GeneTranscriptPositionBiotype
ENSMUSG00000053303 (Slc22a26)
solute carrier family 22 (organic cation transporter), member 26 		ENSMUST00000065634 (Slc22a26-001) 7781980-7802667 protein_coding
ENSMUST00000120522 (Slc22a26-002) 7781041-7802578 protein_coding
ENSMUSG00000067656 (Slc22a27)
solute carrier family 22, member 27 		ENSMUST00000075619 (Slc22a27-001) 7864388-7966027 protein_coding
ENSMUST00000182102 (Slc22a27-002) 7864388-7966000 protein_coding
CIL_0002ML_0004 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000063590-ENSMUSG00000075044 CGP 10090 19:8062209-8218900
GeneTranscriptPositionBiotype
ENSMUSG00000063590 (Slc22a28)
solute carrier family 22, member 28 		ENSMUST00000065651 (Slc22a28-201) 8062209-8131982 protein_coding
ENSMUSG00000075044 (Slc22a29)
solute carrier family 22. member 29 		ENSMUST00000113298 (Slc22a29-001) 8160165-8218899 protein_coding
ENSMUST00000140910 (Slc22a29-002) 8160304-8218900 nonsense_mediated_decay
ENSMUST00000142517 (Slc22a29-004) 8160299-8169226 processed_transcript
ENSMUST00000149182 (Slc22a29-003) 8160474-8218839 nonsense_mediated_decay
CIL_0002ML_0005 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000067656-ENSMUSG00000063590 CGP 10090 19:7864388-8131982
GeneTranscriptPositionBiotype
ENSMUSG00000063590 (Slc22a28)
solute carrier family 22, member 28 		ENSMUST00000065651 (Slc22a28-201) 8062209-8131982 protein_coding
ENSMUSG00000067656 (Slc22a27)
solute carrier family 22, member 27 		ENSMUST00000075619 (Slc22a27-001) 7864388-7966027 protein_coding
ENSMUST00000182102 (Slc22a27-002) 7864388-7966000 protein_coding
CIL_0002ML_0006 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000075044-ENSMUSG00000052562 CGP 10090 19:8160165-8405111
GeneTranscriptPositionBiotype
ENSMUSG00000052562 (Slc22a30)
solute carrier family 22, member 30 		ENSMUST00000064507 (Slc22a30-003) 8335374-8405060 protein_coding
ENSMUST00000096269 (Slc22a30-001) 8335371-8405111 protein_coding
ENSMUST00000120540 (Slc22a30-002) 8343301-8405105 protein_coding
ENSMUSG00000075044 (Slc22a29)
solute carrier family 22. member 29 		ENSMUST00000113298 (Slc22a29-001) 8160165-8218899 protein_coding
ENSMUST00000140910 (Slc22a29-002) 8160304-8218900 nonsense_mediated_decay
ENSMUST00000142517 (Slc22a29-004) 8160299-8169226 processed_transcript
ENSMUST00000149182 (Slc22a29-003) 8160474-8218839 nonsense_mediated_decay

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002ML_0001ENSG00000149742ENST00000279178ENST00000536333ENSG00000184999ENST00000332793ENST00000525620ENST00000526800ENST00000532724ENST00000533176ENST00000533483ENSG00000196600ENST00000306494ENST00000525295ENST00000527057ENST00000528239ENSG00000256181ENST00000538772ENSG00000256847ENST00000539268ENSG00000256863ENST00000538233CIL_0002ML_0002ENSMUSG00000024757ENSMUST00000025666ENSMUST00000138317ENSMUST00000141771ENSMUSG00000053303ENSMUST00000065634ENSMUST00000120522ENSMUSG00000081596ENSMUST00000119342ENSMUSG00000083160ENSMUST00000120027CIL_0002ML_0003ENSMUSG00000053303ENSMUST00000065634ENSMUST00000120522ENSMUSG00000067656ENSMUST00000075619ENSMUST00000182102CIL_0002ML_0004ENSMUSG00000063590ENSMUST00000065651ENSMUSG00000075044ENSMUST00000113298ENSMUST00000140910ENSMUST00000142517ENSMUST00000149182CIL_0002ML_0005ENSMUSG00000063590ENSMUST00000065651ENSMUSG00000067656ENSMUST00000075619ENSMUST00000182102CIL_0002ML_0006ENSMUSG00000052562ENSMUST00000064507ENSMUST00000096269ENSMUST00000120540ENSMUSG00000075044ENSMUST00000113298ENSMUST00000140910ENSMUST00000142517ENSMUST00000149182
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002ML_0001ENSG00000149742ENST00000279178ENSG00000184999ENST00000332793ENST00000525620ENST00000526800ENST00000532724ENST00000533176ENST00000533483ENSG00000196600ENST00000306494ENST00000528239ENSG00000256181ENST00000538772ENSG00000256847ENST00000539268ENSG00000256863ENST00000538233CIL_0002ML_0002ENSMUSG00000024757ENSMUST00000025666ENSMUST00000138317ENSMUST00000141771ENSMUSG00000053303ENSMUST00000065634ENSMUST00000120522ENSMUSG00000081596ENSMUST00000119342ENSMUSG00000083160ENSMUST00000120027CIL_0002ML_0003ENSMUSG00000053303ENSMUST00000065634ENSMUST00000120522ENSMUSG00000067656ENSMUST00000075619ENSMUST00000182102CIL_0002ML_0004ENSMUSG00000063590ENSMUST00000065651ENSMUSG00000075044ENSMUST00000113298ENSMUST00000140910ENSMUST00000142517ENSMUST00000149182CIL_0002ML_0005ENSMUSG00000063590ENSMUST00000065651ENSMUSG00000067656ENSMUST00000075619ENSMUST00000182102CIL_0002ML_0006ENSMUSG00000052562ENSMUST00000064507ENSMUST00000096269ENSMUST00000120540ENSMUSG00000075044ENSMUST00000113298ENSMUST00000140910ENSMUST00000142517ENSMUST00000149182
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000149742 ENST00000279178 0.074±0.00 0.146±0.00 N/A 0.169±0.00 N/A 0.030±0.00 0.040±0.00 3.835±3.70 3.736±0.00 0.138±0.00 N/A 0.018±0.00 N/A 0.074±0.00
ENST00000536333 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000184999 ENST00000332793 N/A N/A N/A N/A 0.049±0.00 N/A N/A 5.594±0.00 N/A N/A N/A 0.015±0.00 0.047±0.03 N/A
ENST00000525620 N/A N/A N/A 0.795±0.69 N/A N/A N/A 0.090±0.00 N/A 0.119±0.00 N/A N/A N/A 0.061±0.00
ENST00000526800 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.126±0.00 N/A N/A
ENST00000532724 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.090±0.00 N/A N/A N/A 0.088±0.00
ENST00000533176 0.026±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.085±0.00
ENST00000533483 N/A N/A N/A 0.067±0.00 N/A N/A N/A 12.101±0.00 5.230±0.00 N/A N/A N/A N/A N/A
ENSG00000196600 ENST00000306494 N/A N/A 0.461±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000525295 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000527057 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000528239 0.018±0.00 N/A N/A 0.066±0.00 0.050±0.02 0.019±0.00 0.019±0.00 3.678±3.67 N/A N/A N/A 0.026±0.02 N/A 0.013±0.00
ENSG00000256181 ENST00000538772 N/A N/A N/A 0.122±0.00 N/A N/A N/A 0.977±0.00 N/A N/A N/A N/A 0.143±0.00 0.069±0.00
ENSG00000256847 ENST00000539268 N/A 0.068±0.00 N/A 0.334±0.00 0.065±0.00 N/A N/A 8.802±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000256863 ENST00000538233 N/A N/A N/A 3.122±0.00 0.035±0.00 N/A N/A 2.679±0.00 0.598±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024757 ENSMUST00000025666 N/A N/A N/A 0.037±0.03 N/A N/A N/A 85.583±27.09 N/A N/A N/A N/A N/A 0.082±0.04
ENSMUST00000138317 N/A N/A N/A N/A 0.085±0.00 N/A N/A N/A 0.029±0.00 0.026±0.00 N/A N/A 0.021±0.00 0.048±0.01
ENSMUST00000141771 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.051±0.00 N/A 0.060±0.06 N/A 0.022±0.00
ENSMUSG00000053303 ENSMUST00000065634 N/A 0.169±0.06 N/A N/A 0.034±0.00 0.083±0.00 N/A 3.572±1.53 33.550±18.04 N/A N/A 0.058±0.00 N/A N/A
ENSMUST00000120522 N/A N/A N/A N/A N/A N/A N/A N/A 4.975±4.96 N/A N/A 0.019±0.00 N/A N/A
ENSMUSG00000081596 ENSMUST00000119342 N/A N/A N/A N/A N/A N/A N/A 0.363±0.16 N/A N/A N/A N/A N/A 0.011±0.00
ENSMUSG00000083160 ENSMUST00000120027 N/A N/A N/A 0.007±0.00 N/A N/A N/A 0.105±0.06 0.005±0.00 N/A N/A N/A N/A 0.202±0.12
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000053303 ENSMUST00000065634 N/A 0.169±0.06 N/A N/A 0.034±0.00 0.083±0.00 N/A 3.572±1.53 33.550±18.04 N/A N/A 0.058±0.00 N/A N/A
ENSMUST00000120522 N/A N/A N/A N/A N/A N/A N/A N/A 4.975±4.96 N/A N/A 0.019±0.00 N/A N/A
ENSMUSG00000067656 ENSMUST00000075619 N/A N/A N/A N/A N/A N/A N/A 1.115±0.34 7.879±7.30 N/A 0.015±0.00 0.070±0.00 0.085±0.01 N/A
ENSMUST00000182102 N/A 0.157±0.06 N/A N/A 0.022±0.00 0.067±0.00 N/A 0.388±0.22 3.165±1.81 N/A N/A 0.010±0.00 0.037±0.00 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000063590 ENSMUST00000065651 N/A N/A N/A N/A 0.096±0.00 N/A 0.013±0.00 4.261±0.54 0.541±0.15 N/A N/A N/A N/A N/A
ENSMUSG00000075044 ENSMUST00000113298 N/A 0.074±0.00 0.011±0.00 0.041±0.01 N/A N/A N/A 5.693±0.40 0.624±0.64 N/A N/A 0.030±0.00 0.030±0.00 0.086±0.04
ENSMUST00000140910 N/A N/A N/A N/A N/A N/A N/A 8.344±1.39 0.178±0.12 N/A N/A 0.099±0.09 N/A N/A
ENSMUST00000142517 N/A N/A 0.009±0.00 N/A N/A N/A N/A N/A 0.016±0.00 N/A N/A 0.152±0.00 N/A 0.092±0.00
ENSMUST00000149182 0.021±0.00 N/A N/A 0.019±0.00 0.025±0.00 0.055±0.00 N/A 3.082±0.05 0.086±0.16 N/A N/A 0.106±0.07 0.041±0.03 0.047±0.03
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000063590 ENSMUST00000065651 N/A N/A N/A N/A 0.096±0.00 N/A 0.013±0.00 4.261±0.54 0.541±0.15 N/A N/A N/A N/A N/A
ENSMUSG00000067656 ENSMUST00000075619 N/A N/A N/A N/A N/A N/A N/A 1.115±0.34 7.879±7.30 N/A 0.015±0.00 0.070±0.00 0.085±0.01 N/A
ENSMUST00000182102 N/A 0.157±0.06 N/A N/A 0.022±0.00 0.067±0.00 N/A 0.388±0.22 3.165±1.81 N/A N/A 0.010±0.00 0.037±0.00 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000052562 ENSMUST00000064507 N/A N/A 0.002±0.00 0.008±0.00 0.098±0.00 N/A 0.018±0.00 N/A 0.013±0.01 0.029±0.00 N/A 0.031±0.01 N/A 0.021±0.00
ENSMUST00000096269 N/A N/A N/A N/A 0.162±0.03 N/A N/A 1.468±0.18 28.626±15.54 N/A N/A 0.024±0.00 N/A 0.066±0.00
ENSMUST00000120540 N/A N/A 0.010±0.00 0.003±0.00 N/A N/A N/A 1.394±0.46 9.957±8.08 N/A N/A 0.009±0.00 0.004±0.00 0.021±0.02
ENSMUSG00000075044 ENSMUST00000113298 N/A 0.074±0.00 0.011±0.00 0.041±0.01 N/A N/A N/A 5.693±0.40 0.624±0.64 N/A N/A 0.030±0.00 0.030±0.00 0.086±0.04
ENSMUST00000140910 N/A N/A N/A N/A N/A N/A N/A 8.344±1.39 0.178±0.12 N/A N/A 0.099±0.09 N/A N/A
ENSMUST00000142517 N/A N/A 0.009±0.00 N/A N/A N/A N/A N/A 0.016±0.00 N/A N/A 0.152±0.00 N/A 0.092±0.00
ENSMUST00000149182 0.021±0.00 N/A N/A 0.019±0.00 0.025±0.00 0.055±0.00 N/A 3.082±0.05 0.086±0.16 N/A N/A 0.106±0.07 0.041±0.03 0.047±0.03

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