C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Region Summary |
| CIL_0002NC_0001 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSG00000074317-ENSG00000175766 | CGP | 9606 | 5:176620084-176646641  |
|
| Gene | Transcript | Position | Biotype | |
ENSG00000074317  (SNCB)synuclein, beta |
ENST00000310112 (SNCB-001)
|
176620084-176630364 | protein_coding | |
|
ENST00000393693 (SNCB-002)
|
176620241-176630529 | protein_coding | ||
|
ENST00000506696 (SNCB-003)
|
176620785-176630000 | protein_coding | ||
|
ENST00000508006 (SNCB-004)
|
176621214-176630048 | retained_intron | ||
|
ENST00000510387 (SNCB-005)
|
176620681-176629994 | protein_coding | ||
|
ENST00000614675 (SNCB-201)
|
176620210-176630556 | protein_coding | ||
|
ENSG00000175766 (EIF4E1B) eukaryotic translation initiation factor 4E family member 1B |
ENST00000318682 (EIF4E1B-201)
|
176630682-176646641 | protein_coding | |
|
ENST00000503895 (EIF4E1B-006)
|
176642928-176645300 | retained_intron | ||
|
ENST00000504597 (EIF4E1B-001)
|
176641672-176646607 | protein_coding | ||
|
ENST00000505497 (EIF4E1B-008)
|
176643245-176645981 | protein_coding | ||
|
ENST00000510473 (EIF4E1B-005)
|
176630682-176642737 | processed_transcript | ||
|
ENST00000510660 (EIF4E1B-003)
|
176630955-176643708 | protein_coding | ||
|
ENST00000512734 (EIF4E1B-007)
|
176644580-176646140 | processed_transcript | ||
|
ENST00000515458 (EIF4E1B-002)
|
176630955-176646641 | retained_intron | ||
| CIL_0002NC_0002 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSMUSG00000034891-ENSMUSG00000074895 | CGP | 10090 | 13:54758860-54788459 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSMUSG00000034891 (Sncb) synuclein, beta |
ENSMUST00000036825 (Sncb-001)
|
54758860-54766595 | protein_coding | |
|
ENSMUST00000134110 (Sncb-004)
|
54759381-54766097 | protein_coding | ||
|
ENSMUST00000138067 (Sncb-003)
|
54765059-54766492 | retained_intron | ||
|
ENSMUST00000153829 (Sncb-002)
|
54759428-54763067 | retained_intron | ||
|
ENSMUSG00000074895 (Eif4e1b) eukaryotic translation initiation factor 4E family member 1B |
ENSMUST00000110003 (Eif4e1b-001)
|
54784013-54788451 | protein_coding | |
|
ENSMUST00000126525 (Eif4e1b-006)
|
54784003-54787376 | nonsense_mediated_decay | ||
|
ENSMUST00000126785 (Eif4e1b-009)
|
54784001-54787469 | protein_coding | ||
|
ENSMUST00000132005 (Eif4e1b-008)
|
54784001-54787375 | protein_coding | ||
|
ENSMUST00000132415 (Eif4e1b-010)
|
54784001-54786863 | protein_coding | ||
|
ENSMUST00000132728 (Eif4e1b-004)
|
54784003-54788459 | protein_coding | ||
|
ENSMUST00000139184 (Eif4e1b-003)
|
54784001-54786653 | protein_coding | ||
|
ENSMUST00000141398 (Eif4e1b-005)
|
54784003-54787384 | protein_coding | ||
|
ENSMUST00000142158 (Eif4e1b-007)
|
54783998-54787375 | protein_coding | ||
|
ENSMUST00000152204 (Eif4e1b-002)
|
54784020-54787476 | protein_coding | ||
|
ENSMUSG00000084949 (Gm16249) predicted gene 16249 |
ENSMUST00000124055 (Gm16249-001)
|
54777514-54783091 | antisense | |
Expression Patterns
|
