C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002NN_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000060036-ENSDARG00000076420 CGP 7955 1:50801021-50945330
GeneTranscriptPositionBiotype
ENSDARG00000013667 (tbck)
TBC1 domain containing kinase 		ENSDART00000043309 (tbck-201) 50705692-50798349 protein_coding
ENSDART00000053028 (tbck-002) 50777701-50801029 protein_coding
ENSDART00000125099 (tbck-001) 50705690-50801031 protein_coding
ENSDARG00000060036 (aimp1)
aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 		ENSDART00000084184 (aimp1-001) 50801021-50826737 protein_coding
ENSDARG00000076420 (dkk2)
dickkopf homolog 2 (Xenopus laevis) 		ENSDART00000114098 (dkk2-001) 50899799-50945330 protein_coding
ENSDARG00000087589 (CR855327.1)
Uncharacterized protein 		ENSDART00000121738 (CR855327.1-201) 50920316-50921353 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0002NN_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000164022-ENSG00000155011 CGP 9606 4:106315544-107283806
GeneTranscriptPositionBiotype
ENSG00000145348 (TBCK)
TBC1 domain containing kinase 		ENST00000273980 (TBCK-001) 106041599-106321495 protein_coding
ENST00000361687 (TBCK-002) 106046080-106316230 protein_coding
ENST00000394706 (TBCK-003) 106046091-106316206 protein_coding
ENST00000394708 (TBCK-006) 106046570-106316266 protein_coding
ENST00000432496 (TBCK-201) 106046076-106316704 protein_coding
ENST00000467183 (TBCK-004) 106046095-106316209 nonsense_mediated_decay
ENST00000503516 (TBCK-013) 106232998-106238740 protein_coding
ENST00000503832 (TBCK-011) 106247823-106252007 nonsense_mediated_decay
ENST00000505574 (TBCK-010) 106244685-106250470 nonsense_mediated_decay
ENST00000506280 (TBCK-005) 106251867-106297739 processed_transcript
ENST00000506384 (TBCK-018) 106163279-106171240 processed_transcript
ENST00000506615 (TBCK-017) 106182353-106230446 processed_transcript
ENST00000507696 (TBCK-009) 106295156-106316235 protein_coding
ENST00000508666 (TBCK-012) 106232944-106247285 nonsense_mediated_decay
ENST00000509532 (TBCK-019) 106251984-106316266 protein_coding
ENST00000509862 (TBCK-008) 106262164-106310588 protein_coding
ENST00000510927 (TBCK-007) 106046079-106247722 retained_intron
ENST00000511011 (TBCK-016) 106171241-106213598 processed_transcript
ENST00000514689 (TBCK-015) 106116203-106213718 processed_transcript
ENST00000515705 (TBCK-014) 106116319-106213771 processed_transcript
ENSG00000155011 (DKK2)
dickkopf WNT signaling pathway inhibitor 2 		ENST00000285311 (DKK2-001) 106921802-107036297 protein_coding
ENST00000510463 (DKK2-004) 106923945-107283806 protein_coding
ENST00000510534 (DKK2-002) 106923821-107035812 retained_intron
ENST00000513208 (DKK2-003) 106923743-107283689 protein_coding
ENSG00000164022 (AIMP1)
aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 		ENST00000358008 (AIMP1-002) 106315696-106348491 protein_coding
ENST00000394701 (AIMP1-001) 106316507-106349226 protein_coding
ENST00000442366 (AIMP1-201) 106315610-106349220 protein_coding
ENST00000510207 (AIMP1-004) 106315544-106331730 protein_coding
ENSG00000213522 (RAC1P5)
ras-related C3 botulinum toxin substrate 1 pseudogene 5 		ENST00000512182 (RAC1P5-001) 107203349-107203924 processed_pseudogene
ENSG00000222333 (AC093680.1)
 ENST00000410401 (AC093680.1-201) 106415706-106415785 miRNA
ENSG00000248915 (ACTR6P1)
ACTR6 pseudogene 1 		ENST00000514311 (ACTR6P1-001) 106836498-106837601 processed_pseudogene
ENSG00000249613 (RP13-612N21.1)
 ENST00000504132 (RP13-612N21.1-001) 106433624-106453448 lincRNA
ENSG00000251081 (RP11-713M6.2)
 ENST00000508555 (RP11-713M6.2-001) 107258700-107301870 lincRNA

Homo sapiens Ensembl (GRCh38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002NN_0001ENSDARG00000013667ENSDART00000043309ENSDART00000053028ENSDART00000125099ENSDARG00000060036ENSDART00000084184ENSDARG00000076420ENSDART00000114098ENSDARG00000087589ENSDART00000121738CIL_0002NN_0002ENSG00000145348ENST00000273980ENST00000361687ENST00000394706ENST00000394708ENST00000432496ENST00000467183ENST00000503516ENST00000503832ENST00000505574ENST00000506280ENST00000506384ENST00000506615ENST00000507696ENST00000508666ENST00000509532ENST00000509862ENST00000510927ENST00000511011ENST00000514689ENST00000515705ENSG00000155011ENST00000285311ENST00000510463ENST00000510534ENST00000513208ENSG00000164022ENST00000358008ENST00000394701ENST00000442366ENST00000510207ENSG00000213522ENST00000512182ENSG00000222333ENST00000410401ENSG00000248915ENST00000514311ENSG00000249613ENST00000504132ENSG00000251081ENST00000508555
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002NN_0001ENSDARG00000013667ENSDART00000043309ENSDART00000125099ENSDARG00000060036ENSDART00000084184ENSDARG00000076420ENSDART00000114098ENSDARG00000087589ENSDART00000121738CIL_0002NN_0002ENSG00000145348ENST00000273980ENST00000361687ENST00000394706ENST00000394708ENST00000432496ENST00000510927ENST00000515705ENSG00000155011ENST00000285311ENST00000510534ENST00000513208ENSG00000164022ENST00000358008ENST00000394701ENST00000442366ENST00000510207ENSG00000213522ENST00000512182ENSG00000222333ENST00000410401ENSG00000248915ENST00000514311ENSG00000249613ENST00000504132ENSG00000251081ENST00000508555
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000013667 ENSDART00000043309 N/A N/A N/A 1.645±1.39 N/A N/A 0.830±0.00 0.162±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000053028 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000125099 N/A N/A N/A 4.414±1.57 N/A N/A 3.037±0.00 3.646±0.00 0.587±0.00 N/A N/A N/A N/A N/A
ENSDARG00000060036 ENSDART00000084184 N/A N/A N/A 11.780±1.67 N/A N/A 33.403±21.97 17.918±0.00 6.334±0.00 N/A 68.614±0.00 N/A N/A N/A
ENSDARG00000076420 ENSDART00000114098 N/A N/A N/A 1.468±0.87 N/A N/A 0.148±0.05 N/A N/A N/A 0.260±0.00 N/A N/A N/A
ENSDARG00000087589 ENSDART00000121738 N/A N/A N/A 3.047±1.15 N/A N/A 0.878±0.75 0.055±0.00 N/A N/A 0.327±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000145348 ENST00000273980 N/A N/A N/A 1.021±0.00 N/A N/A N/A N/A N/A N/A N/A 0.860±0.00 N/A N/A
ENST00000361687 1.801±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.851±0.00 N/A
ENST00000394706 N/A N/A N/A N/A N/A 2.013±0.00 N/A N/A 1.381±0.00 N/A N/A N/A 1.299±0.00 N/A
ENST00000394708 N/A N/A N/A 4.478±0.00 3.535±0.00 4.435±0.00 1.397±0.00 N/A 5.325±0.00 3.606±0.00 1.761±0.00 4.929±0.00 N/A N/A
ENST00000432496 N/A N/A N/A N/A 3.954±0.00 2.160±0.00 1.321±0.00 3.921±0.00 N/A N/A N/A 4.586±0.81 2.194±0.14 3.885±0.00
ENST00000467183 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000503516 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000503832 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505574 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506280 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506384 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506615 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507696 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508666 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509532 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509862 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510927 N/A N/A 2.890±0.00 2.961±0.00 2.844±0.00 2.525±0.00 N/A N/A N/A 5.252±0.00 N/A N/A N/A N/A
ENST00000511011 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514689 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515705 N/A N/A 22.570±0.00 N/A 18.778±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000155011 ENST00000285311 0.612±0.00 0.226±0.00 0.084±0.00 0.642±0.28 0.362±0.05 1.292±0.00 0.192±0.15 0.147±0.00 0.010±0.00 2.267±1.11 0.224±0.00 0.238±0.07 0.467±0.37 0.210±0.17
ENST00000510463 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510534 N/A N/A N/A N/A 0.623±0.00 N/A N/A N/A 0.230±0.00 N/A 0.721±0.00 N/A N/A N/A
ENST00000513208 N/A 0.257±0.00 N/A 0.250±0.00 N/A 0.333±0.00 0.305±0.00 N/A N/A 0.791±0.00 0.134±0.00 0.407±0.25 1.371±0.00 0.067±0.00
ENSG00000164022 ENST00000358008 4.110±0.00 6.607±0.00 2.640±0.00 N/A 4.415±1.87 5.667±1.75 2.985±0.00 6.902±3.42 3.957±0.17 6.145±0.00 2.213±1.49 7.463±2.83 4.525±1.15 7.154±1.47
ENST00000394701 4.731±0.00 7.408±0.00 1.682±0.00 4.525±0.07 3.820±1.53 4.161±0.87 3.422±1.36 5.890±1.72 4.019±1.87 5.083±0.53 2.150±1.46 4.902±1.15 3.580±0.97 5.064±1.30
ENST00000442366 N/A N/A N/A 4.531±0.00 N/A N/A N/A N/A N/A N/A 0.944±0.00 8.219±0.00 4.449±0.00 N/A
ENST00000510207 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.981±0.00 19.052±0.00 15.948±0.00 16.764±0.00
ENSG00000213522 ENST00000512182 0.047±0.00 0.096±0.00 N/A 0.025±0.00 0.048±0.00 N/A N/A 0.144±0.00 N/A 0.237±0.00 0.082±0.00 N/A N/A N/A
ENSG00000222333 ENST00000410401 N/A N/A N/A N/A N/A N/A 0.294±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000248915 ENST00000514311 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.016±0.01
ENSG00000249613 ENST00000504132 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.079±0.05
ENSG00000251081 ENST00000508555 N/A N/A N/A N/A N/A N/A 0.032±0.00 N/A N/A N/A N/A N/A N/A 0.977±0.08

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