C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002OO_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000145147-ENSG00000163138 CGP 9606 4:20253260-20752907
GeneTranscriptPositionBiotype
ENSG00000145147 (SLIT2)
slit homolog 2 (Drosophila) 		ENST00000273739 (SLIT2-004) 20253590-20619286 protein_coding
ENST00000503823 (SLIT2-002) 20253260-20619120 protein_coding
ENST00000503837 (SLIT2-003) 20253816-20619183 protein_coding
ENST00000504154 (SLIT2-001) 20253564-20620557 protein_coding
ENST00000508541 (SLIT2-005) 20614863-20619166 retained_intron
ENST00000508824 (SLIT2-006) 20254920-20486215 protein_coding
ENST00000509099 (SLIT2-008) 20533399-20539566 retained_intron
ENST00000509394 (SLIT2-009) 20542494-20552721 processed_transcript
ENST00000509941 (SLIT2-010) 20553853-20569264 protein_coding
ENST00000511508 (SLIT2-012) 20542619-20568918 protein_coding
ENST00000512993 (SLIT2-011) 20598353-20620561 protein_coding
ENST00000622093 (SLIT2-201) 20253564-20620559 protein_coding
ENSG00000163138 (PACRGL)
PARK2 co-regulated-like 		ENST00000295290 (PACRGL-005) 20700419-20728316 protein_coding
ENST00000360916 (PACRGL-001) 20700413-20728357 protein_coding
ENST00000444671 (PACRGL-012) 20700436-20728321 protein_coding
ENST00000467997 (PACRGL-003) 20700477-20752888 nonsense_mediated_decay
ENST00000471979 (PACRGL-002) 20696282-20752907 nonsense_mediated_decay
ENST00000502374 (PACRGL-015) 20700458-20727589 protein_coding
ENST00000502938 (PACRGL-027) 20700459-20727542 protein_coding
ENST00000503585 (PACRGL-007) 20700413-20727785 protein_coding
ENST00000503747 (PACRGL-034) 20700473-20713538 nonsense_mediated_decay
ENST00000504630 (PACRGL-040) 20700459-20707870 protein_coding
ENST00000505160 (PACRGL-033) 20700466-20701854 protein_coding
ENST00000506457 (PACRGL-039) 20707802-20709836 protein_coding
ENST00000506552 (PACRGL-036) 20712699-20724889 retained_intron
ENST00000506648 (PACRGL-037) 20713076-20727397 retained_intron
ENST00000506702 (PACRGL-011) 20700459-20752900 nonsense_mediated_decay
ENST00000506745 (PACRGL-018) 20700458-20707849 protein_coding
ENST00000506951 (PACRGL-008) 20700466-20724879 nonsense_mediated_decay
ENST00000507634 (PACRGL-016) 20700472-20752861 protein_coding
ENST00000508753 (PACRGL-021) 20700438-20702694 processed_transcript
ENST00000508952 (PACRGL-006) 20700458-20727502 nonsense_mediated_decay
ENST00000509469 (PACRGL-024) 20700458-20712831 protein_coding
ENST00000509625 (PACRGL-032) 20700460-20702196 protein_coding
ENST00000510051 (PACRGL-004) 20700413-20713521 protein_coding
ENST00000510700 (PACRGL-022) 20700439-20701884 protein_coding
ENST00000511089 (PACRGL-035) 20700481-20713541 protein_coding
ENST00000511160 (PACRGL-028) 20700459-20704524 protein_coding
ENST00000513459 (PACRGL-010) 20700476-20728319 protein_coding
ENST00000513590 (PACRGL-029) 20700459-20713540 protein_coding
ENST00000513861 (PACRGL-026) 20700458-20713516 protein_coding
ENST00000514292 (PACRGL-031) 20700459-20713540 protein_coding
ENST00000514485 (PACRGL-020) 20700427-20709774 protein_coding
ENST00000514663 (PACRGL-014) 20700458-20709714 protein_coding
ENST00000515339 (PACRGL-023) 20700458-20713461 protein_coding
ENSG00000185774 (KCNIP4)
Kv channel interacting protein 4 		ENST00000359001 (KCNIP4-201) 20728616-20850779 protein_coding
ENST00000382148 (KCNIP4-001) 20728616-21697774 protein_coding
ENST00000382149 (KCNIP4-008) 20729916-20983925 processed_transcript
ENST00000382150 (KCNIP4-002) 20729210-21303989 protein_coding
ENST00000382152 (KCNIP4-004) 20729236-21948799 protein_coding
ENST00000447367 (KCNIP4-003) 20729206-21948745 protein_coding
ENST00000509207 (KCNIP4-009) 20729638-21544656 protein_coding
ENST00000512102 (KCNIP4-015) 21729850-21855715 processed_transcript
ENST00000515373 (KCNIP4-005) 20850315-20882710 retained_intron
ENST00000515786 (KCNIP4-006) 20730082-21948631 nonsense_mediated_decay
ENSG00000248228 (SLIT2-IT1)
SLIT2 intronic transcript 1 (non-protein coding) 		ENST00000515882 (SLIT2-IT1-001) 20392189-20394856 sense_intronic
CIL_0002OO_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000031558-ENSMUSG00000029089 CGP 10090 5:47983155-48388756
GeneTranscriptPositionBiotype
ENSMUSG00000029089 (Pacrgl)
PARK2 co-regulated-like 		ENSMUST00000030968 (Pacrgl-201) 48372392-48388756 protein_coding
ENSMUSG00000031558 (Slit2)
slit homolog 2 (Drosophila) 		ENSMUST00000033967 (Slit2-003) 47983155-48304396 nonsense_mediated_decay
ENSMUST00000170109 (Slit2-001) 47984793-48306282 protein_coding
ENSMUST00000172484 (Slit2-005) 48231492-48282948 retained_intron
ENSMUST00000172493 (Slit2-014) 48242549-48259597 protein_coding
ENSMUST00000172561 (Slit2-015) 48256573-48259551 retained_intron
ENSMUST00000172824 (Slit2-013) 48223471-48238452 processed_transcript
ENSMUST00000172998 (Slit2-020) 47983155-48183157 retained_intron
ENSMUST00000173107 (Slit2-008) 47984811-48304522 protein_coding
ENSMUST00000173303 (Slit2-012) 48182104-48189530 retained_intron
ENSMUST00000173646 (Slit2-017) 48275243-48281799 retained_intron
ENSMUST00000173671 (Slit2-004) 48248644-48262665 processed_transcript
ENSMUST00000173686 (Slit2-018) 48281778-48302505 nonsense_mediated_decay
ENSMUST00000173702 (Slit2-007) 47984811-48304522 protein_coding
ENSMUST00000173774 (Slit2-011) 48169193-48192209 processed_transcript
ENSMUST00000173926 (Slit2-010) 47984994-48173193 processed_transcript
ENSMUST00000174061 (Slit2-019) 47983155-47990332 retained_intron
ENSMUST00000174313 (Slit2-002) 47984571-48304956 protein_coding
ENSMUST00000174421 (Slit2-006) 47984811-48304522 protein_coding
ENSMUST00000174487 (Slit2-016) 48189467-48230121 processed_transcript
ENSMUST00000174658 (Slit2-009) 47987842-48189592 nonsense_mediated_decay
ENSMUSG00000065603 (Mir218-1)
microRNA 218-1 		ENSMUST00000083669 (Mir218-1-201) 48223942-48224051 miRNA
ENSMUSG00000092309 (4930518C09Rik)
RIKEN cDNA 4930518C09 gene 		ENSMUST00000172700 (4930518C09Rik-001) 48003066-48005707 processed_transcript
ENSMUSG00000092559 (Gm20475)
predicted gene 20475 		ENSMUST00000174884 (Gm20475-001) 48005784-48007923 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002OO_0001ENSG00000145147ENST00000273739ENST00000503823ENST00000503837ENST00000504154ENST00000508541ENST00000512993ENST00000622093ENSG00000163138ENST00000295290ENST00000360916ENST00000444671ENST00000467997ENST00000502374ENST00000502938ENST00000503747ENST00000506648ENST00000506702ENST00000507634ENST00000508952ENST00000513459ENST00000513861ENST00000514292ENST00000515339ENSG00000185774ENST00000359001ENST00000382148ENST00000382149ENST00000382150ENST00000447367ENST00000509207ENST00000515786ENSG00000248228ENST00000515882CIL_0002OO_0002ENSMUSG00000029089ENSMUST00000030968ENSMUSG00000031558ENSMUST00000033967ENSMUST00000170109ENSMUST00000172484ENSMUST00000172493ENSMUST00000172998ENSMUST00000173107ENSMUST00000173686ENSMUST00000173702ENSMUST00000173926ENSMUST00000174061ENSMUST00000174313ENSMUST00000174421ENSMUSG00000065603ENSMUST00000083669ENSMUSG00000092309ENSMUST00000172700ENSMUSG00000092559ENSMUST00000174884
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000145147 ENST00000273739 N/A N/A N/A N/A 2.533±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000503823 N/A N/A N/A N/A N/A N/A 0.369±0.00 0.806±0.00 0.079±0.00 2.560±0.00 N/A N/A 4.419±0.00 N/A
ENST00000503837 N/A N/A N/A N/A N/A 0.393±0.00 0.186±0.00 N/A N/A 3.146±0.00 0.961±0.00 0.191±0.00 N/A 0.117±0.00
ENST00000504154 1.488±0.00 2.004±0.00 2.663±0.00 1.864±0.67 3.127±1.56 2.557±1.30 0.801±0.18 1.690±0.00 5.215±0.00 7.958±3.40 N/A 0.365±0.16 3.626±1.77 1.767±1.27
ENST00000508541 N/A N/A N/A N/A N/A N/A N/A 0.277±0.00 N/A N/A N/A N/A N/A N/A
ENST00000508824 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509099 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509394 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509941 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511508 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512993 N/A N/A N/A N/A N/A N/A N/A N/A 0.374±0.00 N/A 1.254±0.00 N/A N/A N/A
ENST00000622093 N/A N/A N/A 1.053±0.00 N/A N/A N/A N/A N/A N/A 0.457±0.00 N/A N/A N/A
ENSG00000163138 ENST00000295290 N/A 0.573±0.00 N/A N/A N/A N/A N/A N/A 0.160±0.00 N/A N/A N/A N/A N/A
ENST00000360916 N/A N/A N/A 1.592±0.65 1.012±0.00 0.338±0.00 0.579±0.00 0.657±0.00 N/A N/A N/A N/A N/A 1.666±0.00
ENST00000444671 N/A N/A N/A 1.595±0.00 N/A 0.909±0.11 0.289±0.00 N/A 0.757±0.44 0.937±0.00 0.198±0.00 1.657±0.43 0.650±0.20 N/A
ENST00000467997 N/A N/A N/A N/A N/A 0.866±0.00 N/A N/A N/A N/A N/A 1.207±0.00 0.653±0.00 4.245±0.00
ENST00000471979 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000502374 N/A N/A N/A 1.745±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000502938 N/A N/A N/A N/A N/A 1.225±0.00 0.297±0.00 N/A 2.696±0.00 2.549±0.00 N/A N/A N/A N/A
ENST00000503585 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000503747 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.398±0.14 2.419±0.00 N/A N/A
ENST00000504630 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505160 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506457 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506552 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506648 N/A N/A N/A N/A N/A N/A N/A 1.463±0.00 N/A 6.668±0.00 N/A N/A N/A N/A
ENST00000506702 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.711±0.00 0.624±0.11 4.907±0.00
ENST00000506745 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506951 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507634 0.633±0.00 N/A N/A 1.796±0.00 N/A N/A N/A 1.548±0.00 1.309±0.84 1.112±0.00 N/A 2.327±0.00 N/A N/A
ENST00000508753 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508952 0.788±0.00 1.432±0.00 N/A N/A 2.220±0.00 N/A N/A N/A N/A N/A N/A N/A 0.764±0.00 5.361±0.00
ENST00000509469 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509625 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510051 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510700 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511089 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511160 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513459 N/A 0.700±0.00 N/A N/A N/A N/A N/A N/A 0.151±0.00 0.484±0.00 N/A 0.654±0.00 0.620±0.00 1.631±0.00
ENST00000513590 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513861 N/A N/A N/A N/A N/A N/A 0.543±0.00 N/A N/A N/A N/A N/A 1.647±0.00 N/A
ENST00000514292 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.338±0.00 N/A N/A N/A N/A
ENST00000514485 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514663 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515339 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.265±0.66 N/A 3.254±0.00 N/A
ENSG00000185774 ENST00000359001 0.136±0.00 0.106±0.00 N/A 5.133±0.88 N/A 1.506±0.00 N/A 1.889±0.00 N/A 0.170±0.00 N/A N/A 0.112±0.04 0.551±0.00
ENST00000382148 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.087±0.00 N/A
ENST00000382149 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.140±0.00 N/A N/A N/A N/A
ENST00000382150 N/A N/A N/A N/A N/A N/A N/A 0.028±0.00 N/A N/A N/A N/A N/A N/A
ENST00000382152 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000447367 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.115±0.00 N/A
ENST00000509207 N/A N/A N/A N/A N/A N/A N/A 1.692±0.00 N/A 0.070±0.00 N/A N/A 0.058±0.00 N/A
ENST00000512102 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515373 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515786 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.163±0.00 N/A N/A N/A
ENSG00000248228 ENST00000515882 N/A 0.123±0.00 N/A 0.106±0.00 N/A N/A N/A N/A N/A 0.017±0.00 N/A N/A N/A 8.433±1.47
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029089 ENSMUST00000030968 1.996±1.02 1.685±0.30 4.172±0.42 2.251±1.47 1.294±0.68 1.376±0.20 0.885±0.29 1.660±0.61 2.591±1.61 1.546±0.54 0.650±0.34 2.540±1.08 2.787±1.48 13.107±6.77
ENSMUSG00000031558 ENSMUST00000033967 0.380±0.17 0.455±0.39 0.388±0.03 1.783±0.00 1.582±0.47 0.501±0.23 0.443±0.20 1.160±0.50 0.078±0.01 3.073±0.53 0.026±0.01 1.242±0.81 0.387±0.24 0.121±0.06
ENSMUST00000170109 N/A 0.885±0.40 0.790±0.28 N/A 0.819±0.16 N/A 0.245±0.01 0.867±0.19 N/A 2.600±0.00 0.026±0.01 1.705±0.74 0.439±0.28 0.084±0.00
ENSMUST00000172484 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.033±0.00 N/A N/A N/A
ENSMUST00000172493 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.289±0.00 N/A
ENSMUST00000172561 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000172824 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000172998 N/A N/A N/A N/A N/A 0.227±0.00 N/A N/A N/A 2.728±0.00 N/A N/A N/A N/A
ENSMUST00000173107 0.124±0.00 N/A N/A N/A N/A N/A 0.325±0.00 N/A 0.055±0.04 1.496±0.00 N/A 0.956±0.00 N/A 0.134±0.00
ENSMUST00000173303 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000173646 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000173671 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000173686 N/A N/A N/A N/A N/A N/A N/A N/A 0.081±0.00 N/A 0.269±0.06 N/A N/A N/A
ENSMUST00000173702 N/A N/A N/A N/A N/A N/A N/A N/A 0.028±0.02 N/A N/A N/A N/A N/A
ENSMUST00000173774 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000173926 N/A N/A N/A N/A N/A N/A N/A N/A 0.085±0.00 N/A N/A N/A N/A N/A
ENSMUST00000174061 N/A 1.379±0.66 N/A N/A 1.585±0.00 0.636±0.14 0.265±0.00 N/A 0.011±0.00 N/A N/A 1.357±0.36 N/A 0.205±0.00
ENSMUST00000174313 0.253±0.09 0.418±0.00 1.090±0.24 3.534±1.16 1.522±0.84 0.339±0.04 0.285±0.01 1.383±0.32 0.117±0.04 1.755±0.00 0.031±0.01 1.172±0.38 0.406±0.25 0.115±0.03
ENSMUST00000174421 N/A N/A N/A N/A N/A N/A N/A N/A 0.004±0.00 N/A N/A N/A N/A N/A
ENSMUST00000174487 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000174658 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000065603 ENSMUST00000083669 N/A N/A N/A 35.166±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000092309 ENSMUST00000172700 N/A N/A N/A 0.025±0.00 N/A N/A N/A N/A 0.026±0.01 0.160±0.00 N/A N/A 0.130±0.01 0.597±0.30
ENSMUSG00000092559 ENSMUST00000174884 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.207±1.16

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