C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002OR_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000181982-ENSG00000153012 CGP 9606 4:24806117-25030879
GeneTranscriptPositionBiotype
ENSG00000153012 (LGI2)
leucine-rich repeat LGI family, member 2 		ENST00000382114 (LGI2-001) 24998847-25030879 protein_coding
ENST00000512108 (LGI2-003) 24999767-25030665 protein_coding
ENSG00000181982 (CCDC149)
coiled-coil domain containing 149 		ENST00000324309 (CCDC149-003) 24826940-24980204 retained_intron
ENST00000389609 (CCDC149-002) 24807996-24980148 protein_coding
ENST00000502801 (CCDC149-005) 24808188-24912954 protein_coding
ENST00000504487 (CCDC149-001) 24806117-24912886 protein_coding
ENST00000507096 (CCDC149-006) 24808672-24820197 processed_transcript
ENST00000508236 (CCDC149-007) 24821057-24823045 processed_transcript
ENST00000512432 (CCDC149-008) 24836436-24853268 processed_transcript
CIL_0002OR_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000045790-ENSMUSG00000039252 CGP 10090 5:52374651-52566303
GeneTranscriptPositionBiotype
ENSMUSG00000039252 (Lgi2)
leucine-rich repeat LGI family, member 2 		ENSMUST00000039750 (Lgi2-201) 52537864-52566303 protein_coding
ENSMUSG00000045790 (Ccdc149)
coiled-coil domain containing 149 		ENSMUST00000059428 (Ccdc149-201) 52374651-52471543 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002OR_0001ENSG00000153012ENST00000382114ENST00000512108ENSG00000181982ENST00000324309ENST00000389609ENST00000502801ENST00000504487ENST00000507096ENST00000508236ENST00000512432CIL_0002OR_0002ENSMUSG00000039252ENSMUST00000039750ENSMUSG00000045790ENSMUST00000059428
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002OR_0001ENSG00000153012ENST00000382114ENST00000512108ENSG00000181982ENST00000324309ENST00000389609ENST00000502801ENST00000504487ENST00000507096ENST00000512432CIL_0002OR_0002ENSMUSG00000039252ENSMUST00000039750ENSMUSG00000045790ENSMUST00000059428
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000153012 ENST00000382114 1.051±0.00 3.843±0.00 0.593±0.00 1.154±0.01 0.641±0.10 0.482±0.26 0.468±0.26 1.681±0.00 0.144±0.13 0.523±0.27 0.138±0.00 1.110±0.74 1.191±0.13 0.994±0.87
ENST00000512108 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.120±0.00 N/A N/A N/A
ENSG00000181982 ENST00000324309 N/A N/A 0.334±0.00 N/A N/A N/A 0.092±0.00 N/A 0.331±0.00 N/A 0.153±0.00 N/A N/A N/A
ENST00000389609 2.224±0.00 N/A N/A N/A N/A N/A 1.075±0.00 N/A 1.079±0.28 1.412±0.00 1.074±0.00 0.814±0.25 1.039±0.07 N/A
ENST00000502801 N/A N/A N/A N/A N/A N/A N/A 0.757±0.00 N/A N/A N/A N/A N/A N/A
ENST00000504487 5.003±0.00 4.449±0.00 0.244±0.00 4.008±2.51 2.788±0.00 4.096±2.95 0.769±0.55 1.960±1.23 1.623±0.31 1.729±0.76 1.289±0.00 2.592±1.34 3.920±1.62 3.872±2.09
ENST00000507096 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.507±0.00 15.807±0.00 N/A
ENST00000508236 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512432 N/A N/A 3.429±0.00 N/A N/A N/A N/A N/A N/A N/A 2.354±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000039252 ENSMUST00000039750 1.080±0.26 0.426±0.18 N/A N/A 1.114±0.04 0.869±0.13 0.312±0.11 0.196±0.10 0.117±0.12 0.682±0.36 0.294±0.13 4.561±2.57 0.276±0.00 0.279±0.13
ENSMUSG00000045790 ENSMUST00000059428 0.923±0.31 0.726±0.12 1.562±0.24 10.263±12.18 0.528±0.33 1.724±0.48 1.180±0.38 0.729±0.13 0.364±0.21 1.257±0.21 0.260±0.07 2.210±0.90 0.288±0.12 0.288±0.02

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