C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002PJ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000103089-ENSG00000103091 CGP 9606 16:74712955-75000173
GeneTranscriptPositionBiotype
ENSG00000103089 (FA2H)
fatty acid 2-hydroxylase 		ENST00000219368 (FA2H-001) 74712955-74774825 protein_coding
ENST00000562145 (FA2H-003) 74712955-74717106 retained_intron
ENST00000567683 (FA2H-002) 74713598-74774831 nonsense_mediated_decay
ENST00000569949 (FA2H-004) 74718999-74741269 protein_coding
ENST00000618933 (FA2H-005) 74725956-74726247 protein_coding
ENSG00000103091 (WDR59)
WD repeat domain 59 		ENST00000262144 (WDR59-001) 74871367-74985148 protein_coding
ENST00000536050 (WDR59-002) 74912005-74984826 protein_coding
ENST00000561717 (WDR59-009) 74915680-74921960 retained_intron
ENST00000562331 (WDR59-004) 74949852-74997173 processed_transcript
ENST00000562371 (WDR59-012) 74909525-74916037 retained_intron
ENST00000562539 (WDR59-011) 74912118-74916160 retained_intron
ENST00000562854 (WDR59-014) 74915460-74915967 processed_transcript
ENST00000563111 (WDR59-005) 74942740-74979116 protein_coding
ENST00000563381 (WDR59-024) 74889660-74904157 retained_intron
ENST00000563797 (WDR59-020) 74874426-74904020 protein_coding
ENST00000564859 (WDR59-006) 74956484-74985031 nonsense_mediated_decay
ENST00000566924 (WDR59-017) 74889723-74909606 nonsense_mediated_decay
ENST00000567018 (WDR59-019) 74888211-74893940 retained_intron
ENST00000568323 (WDR59-023) 74938251-75000173 processed_transcript
ENST00000568462 (WDR59-008) 74923950-74965810 processed_transcript
ENST00000569183 (WDR59-021) 74874079-74886235 retained_intron
ENST00000569229 (WDR59-015) 74889703-74912235 protein_coding
ENST00000569421 (WDR59-003) 74962820-74965822 processed_transcript
ENST00000569549 (WDR59-013) 74909747-74930792 retained_intron
ENST00000569788 (WDR59-018) 74888244-74904346 retained_intron
ENST00000569968 (WDR59-022) 74874395-74886469 retained_intron
ENST00000570070 (WDR59-016) 74893707-74909735 retained_intron
ENST00000616369 (WDR59-010) 74908733-74985083 protein_coding
ENSG00000186187 (ZNRF1)
zinc and ring finger 1, E3 ubiquitin protein ligase 		ENST00000320619 (ZNRF1-001) 74999037-75108707 protein_coding
ENST00000335325 (ZNRF1-002) 74999030-75110994 protein_coding
ENST00000564320 (ZNRF1-008) 75000242-75107774 processed_transcript
ENST00000566244 (ZNRF1-004) 75104060-75108039 retained_intron
ENST00000566250 (ZNRF1-003) 74999345-75105005 protein_coding
ENST00000567962 (ZNRF1-007) 74999345-75108028 protein_coding
ENST00000568351 (ZNRF1-010) 75104784-75108590 protein_coding
ENST00000568494 (ZNRF1-005) 75104798-75108004 retained_intron
ENST00000568511 (ZNRF1-009) 75002297-75104889 protein_coding
ENST00000568844 (ZNRF1-006) 75105383-75110713 retained_intron
ENST00000579084 (ZNRF1-012) 75095144-75105336 processed_transcript
ENSG00000261458 (RP11-787D11.1)
 ENST00000565194 (RP11-787D11.1-001) 74842587-74843883 unprocessed_pseudogene

Homo sapiens Ensembl (GRCh38)

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CIL_0002PJ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000033579-ENSMUSG00000031959 CGP 10090 8:111345135-111522107
GeneTranscriptPositionBiotype
ENSMUSG00000031959 (Wdr59)
WD repeat domain 59 		ENSMUST00000034437 (Wdr59-201) 111448784-111522107 protein_coding
ENSMUST00000038193 (Wdr59-202) 111448784-111522107 protein_coding
ENSMUSG00000033579 (Fa2h)
fatty acid 2-hydroxylase 		ENSMUST00000038475 (Fa2h-001) 111345141-111393824 protein_coding
ENSMUST00000159336 (Fa2h-003) 111345135-111366477 processed_transcript
ENSMUST00000162216 (Fa2h-004) 111345765-111348057 processed_transcript
ENSMUST00000162463 (Fa2h-002) 111347470-111393818 retained_intron

Mus musculus Ensembl (GRCm38)

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Structures from Ensembl
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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002PJ_0001ENSG00000103089ENST00000219368ENST00000562145ENST00000567683ENST00000618933ENSG00000103091ENST00000262144ENST00000536050ENST00000569549ENST00000616369ENSG00000186187ENST00000320619ENST00000335325ENST00000566250ENST00000567962ENST00000568351ENSG00000261458ENST00000565194CIL_0002PJ_0002ENSMUSG00000031959ENSMUST00000034437ENSMUST00000038193ENSMUSG00000033579ENSMUST00000038475ENSMUST00000159336ENSMUST00000162216ENSMUST00000162463
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000103089 ENST00000219368 N/A N/A 0.128±0.00 10.057±7.81 0.728±0.17 0.238±0.00 N/A 3.541±0.00 N/A 1.231±0.00 0.017±0.00 2.404±2.33 1.595±0.48 1.759±0.00
ENST00000562145 N/A N/A N/A N/A N/A N/A N/A 0.040±0.00 N/A N/A N/A N/A N/A N/A
ENST00000567683 0.128±0.00 0.101±0.00 N/A N/A N/A 0.577±0.00 0.204±0.00 N/A 0.111±0.00 N/A N/A 2.178±0.00 0.219±0.00 0.674±0.00
ENST00000569949 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000618933 N/A N/A 0.797±0.00 N/A 2.418±0.00 N/A 0.571±0.00 N/A N/A 0.413±0.00 N/A N/A N/A N/A
ENSG00000103091 ENST00000262144 1.725±0.00 3.058±0.00 N/A 3.194±0.00 1.757±1.14 1.296±0.00 1.966±1.67 6.254±0.00 2.705±0.00 2.364±0.00 1.435±0.00 2.487±0.82 3.115±0.65 3.033±0.11
ENST00000536050 N/A N/A N/A N/A 1.909±0.00 N/A N/A 2.823±0.00 N/A N/A N/A N/A N/A N/A
ENST00000561717 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000562331 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000562371 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000562539 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000562854 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563111 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563381 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563797 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564859 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566924 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567018 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568323 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568462 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569183 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569229 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569421 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569549 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 12.842±0.00 10.719±0.00 19.909±0.00
ENST00000569788 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569968 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000570070 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000616369 N/A N/A N/A N/A 1.715±0.00 N/A N/A N/A N/A N/A 3.575±2.01 7.281±0.00 7.257±0.52 N/A
ENSG00000186187 ENST00000320619 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.356±2.90 9.743±0.00 6.635±0.10 N/A
ENST00000335325 N/A N/A N/A 0.800±0.00 N/A N/A N/A 1.047±0.00 N/A N/A N/A N/A N/A N/A
ENST00000564320 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566244 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566250 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 20.637±0.00 43.015±0.00
ENST00000567962 16.387±0.00 18.172±0.00 N/A 4.604±0.00 N/A 13.703±0.00 N/A N/A N/A 30.288±0.00 23.225±0.00 N/A N/A 27.920±0.00
ENST00000568351 8.827±0.00 12.344±0.00 N/A 15.772±0.00 N/A 7.277±0.00 13.398±0.00 N/A N/A 14.213±0.00 12.697±0.00 N/A N/A 16.569±0.00
ENST00000568494 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568511 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568844 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000579084 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000261458 ENST00000565194 N/A 0.083±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.498±0.10
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031959 ENSMUST00000034437 N/A N/A N/A 0.812±0.00 N/A N/A N/A N/A 0.398±0.00 N/A N/A 2.756±0.00 N/A 0.097±0.00
ENSMUST00000038193 1.755±0.68 2.257±0.01 0.502±0.04 2.874±0.89 1.948±0.91 0.881±0.00 1.210±0.22 1.952±0.79 1.464±0.87 1.409±0.00 0.797±0.27 5.408±2.02 0.735±0.47 2.279±0.22
ENSMUSG00000033579 ENSMUST00000038475 0.143±0.04 5.058±1.41 15.691±2.98 0.676±0.82 2.241±1.49 52.021±5.36 0.070±0.03 6.625±1.21 0.025±0.02 0.372±0.14 0.321±0.19 0.583±0.39 1.949±2.19 34.528±14.69
ENSMUST00000159336 0.017±0.00 N/A N/A 0.017±0.00 N/A N/A 0.013±0.01 N/A 0.016±0.00 N/A 0.189±0.08 0.198±0.00 0.187±0.00 N/A
ENSMUST00000162216 0.072±0.00 N/A N/A N/A N/A N/A N/A N/A 0.011±0.00 N/A 0.454±0.00 N/A 0.141±0.00 N/A
ENSMUST00000162463 0.217±0.06 9.742±3.29 N/A N/A 0.909±0.19 28.973±1.59 0.021±0.00 N/A 0.044±0.03 0.123±0.03 0.118±0.07 0.660±0.29 N/A 1.584±0.00

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