C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002QA_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000157703-ENSG00000105929 CGP 9606 7:138594285-138799560
GeneTranscriptPositionBiotype
ENSG00000157703 (SVOPL)
SVOP-like 		ENST00000288513 (SVOPL-001) 138594285-138663152 protein_coding
ENST00000419765 (SVOPL-005) 138594600-138679079 protein_coding
ENST00000421622 (SVOPL-004) 138594285-138701352 protein_coding
ENST00000436657 (SVOPL-201) 138594286-138664224 protein_coding
ENST00000441685 (SVOPL-002) 138594285-138663571 nonsense_mediated_decay
ENST00000463557 (SVOPL-006) 138594437-138627444 processed_transcript
ENST00000478865 (SVOPL-007) 138594287-138626094 retained_intron
ENSG00000214128 (TMEM213)
transmembrane protein 213 		ENST00000397602 (TMEM213-005) 138797952-138803748 protein_coding
ENST00000413208 (TMEM213-004) 138798012-138838101 protein_coding
ENST00000442682 (TMEM213-001) 138797952-138806759 protein_coding
ENST00000458494 (TMEM213-002) 138798007-138803291 protein_coding
ENST00000472775 (TMEM213-003) 138798029-138801811 retained_intron
ENSG00000223721 (UQCRFS1P2)
ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 pseudogene 2 		ENST00000426701 (UQCRFS1P2-001) 138701607-138703062 processed_pseudogene
ENSG00000243099 (AC020983.5)
 ENST00000417063 (AC020983.5-001) 138688980-138689522 processed_pseudogene
CIL_0002QA_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000029830-ENSMUSG00000038600 CGP 10090 6:37983739-38124586
GeneTranscriptPositionBiotype
ENSMUSG00000029829 (Tmem213)
transmembrane protein 213 		ENSMUST00000031851 (Tmem213-201) 38109353-38115806 protein_coding
ENSMUSG00000029830 (Svopl)
SV2 related protein homolog (rat)-like 		ENSMUST00000040486 (Svopl-004) 38015273-38046996 retained_intron
ENSMUST00000096040 (Svopl-001) 37983739-38046996 protein_coding
ENSMUST00000172585 (Svopl-002) 37984512-38031089 nonsense_mediated_decay
ENSMUST00000173428 (Svopl-003) 38014818-38023287 retained_intron
ENSMUSG00000038600 (Atp6v0a4)
ATPase, H+ transporting, lysosomal V0 subunit A4 		ENSMUST00000040259 (Atp6v0a4-001) 38048483-38124586 protein_coding
ENSMUST00000114908 (Atp6v0a4-002) 38048483-38109549 protein_coding
ENSMUST00000130816 (Atp6v0a4-003) 38093680-38124489 processed_transcript
ENSMUST00000132736 (Atp6v0a4-007) 38048483-38051561 processed_transcript
ENSMUST00000135594 (Atp6v0a4-006) 38051281-38055153 retained_intron
ENSMUST00000138385 (Atp6v0a4-004) 38088719-38097185 retained_intron
ENSMUST00000144752 (Atp6v0a4-005) 38078915-38083372 processed_transcript
ENSMUSG00000063455 (D630045J12Rik)
RIKEN cDNA D630045J12 gene 		ENSMUST00000117556 (D630045J12Rik-001) 38123174-38196593 protein_coding
ENSMUST00000127925 (D630045J12Rik-003) 38126014-38147431 retained_intron
ENSMUST00000144973 (D630045J12Rik-004) 38126020-38147374 retained_intron
ENSMUST00000149557 (D630045J12Rik-002) 38137442-38194422 protein_coding
ENSMUST00000152464 (D630045J12Rik-005) 38158128-38168616 retained_intron
ENSMUST00000169256 (D630045J12Rik-201) 38123176-38254009 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002QA_0001ENSG00000157703ENST00000288513ENST00000419765ENST00000421622ENST00000436657ENST00000441685ENST00000463557ENST00000478865ENSG00000214128ENST00000397602ENST00000413208ENST00000442682ENST00000458494ENST00000472775ENSG00000223721ENST00000426701ENSG00000243099ENST00000417063CIL_0002QA_0002ENSMUSG00000029829ENSMUST00000031851ENSMUSG00000029830ENSMUST00000040486ENSMUST00000096040ENSMUST00000172585ENSMUST00000173428ENSMUSG00000038600ENSMUST00000040259ENSMUST00000114908ENSMUST00000130816ENSMUST00000132736ENSMUST00000135594ENSMUST00000138385ENSMUST00000144752ENSMUSG00000063455ENSMUST00000117556ENSMUST00000127925ENSMUST00000144973ENSMUST00000149557ENSMUST00000152464ENSMUST00000169256
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002QA_0001ENSG00000157703ENST00000288513ENST00000419765ENST00000421622ENST00000436657ENST00000441685ENST00000463557ENST00000478865ENSG00000214128ENST00000397602ENST00000442682ENSG00000223721ENST00000426701ENSG00000243099ENST00000417063CIL_0002QA_0002ENSMUSG00000029829ENSMUST00000031851ENSMUSG00000029830ENSMUST00000040486ENSMUST00000096040ENSMUST00000172585ENSMUST00000173428ENSMUSG00000038600ENSMUST00000040259ENSMUST00000114908ENSMUST00000138385ENSMUSG00000063455ENSMUST00000117556ENSMUST00000127925ENSMUST00000144973ENSMUST00000149557ENSMUST00000169256
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000157703 ENST00000288513 N/A N/A N/A N/A 0.172±0.00 0.290±0.25 N/A N/A N/A N/A N/A 0.369±0.13 0.154±0.09 0.343±0.00
ENST00000419765 N/A 0.064±0.00 N/A 0.238±0.19 0.544±0.00 N/A N/A 0.232±0.00 N/A 0.387±0.00 N/A 0.162±0.00 0.334±0.20 N/A
ENST00000421622 N/A N/A 0.786±0.00 N/A N/A 0.440±0.00 N/A N/A N/A 0.281±0.00 N/A N/A N/A N/A
ENST00000436657 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.115±0.00 0.261±0.00 N/A
ENST00000441685 N/A N/A 0.071±0.00 N/A N/A 0.023±0.02 N/A N/A N/A N/A N/A 0.012±0.00 N/A 0.172±0.14
ENST00000463557 N/A N/A N/A N/A N/A N/A N/A 0.327±0.00 N/A N/A N/A N/A 0.358±0.19 N/A
ENST00000478865 N/A N/A N/A N/A N/A 0.039±0.00 N/A N/A N/A N/A N/A 0.118±0.00 N/A N/A
ENSG00000214128 ENST00000397602 N/A N/A N/A N/A N/A N/A N/A N/A 0.300±0.00 N/A N/A N/A N/A N/A
ENST00000413208 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000442682 0.082±0.00 0.165±0.00 5.548±0.00 N/A N/A N/A N/A 27.570±0.00 N/A 0.301±0.00 N/A N/A N/A N/A
ENST00000458494 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472775 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000223721 ENST00000426701 N/A N/A 0.389±0.00 N/A N/A N/A N/A 0.135±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000243099 ENST00000417063 N/A N/A 0.111±0.00 0.026±0.00 0.050±0.00 0.047±0.00 0.045±0.00 N/A N/A N/A 0.045±0.00 N/A 0.114±0.00 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029829 ENSMUST00000031851 N/A N/A N/A N/A N/A N/A N/A 200.057±55.38 N/A N/A N/A N/A N/A N/A
ENSMUSG00000029830 ENSMUST00000040486 0.107±0.00 N/A 0.056±0.00 N/A N/A 0.057±0.02 N/A 0.534±0.08 0.008±0.00 0.065±0.03 0.022±0.00 0.156±0.14 0.025±0.02 0.009±0.00
ENSMUST00000096040 0.284±0.00 0.114±0.04 0.348±0.04 0.019±0.00 0.210±0.10 0.138±0.04 0.180±0.00 2.558±0.62 0.019±0.00 0.135±0.02 0.058±0.02 0.369±0.22 0.068±0.06 0.103±0.05
ENSMUST00000172585 0.854±0.40 0.388±0.07 0.186±0.00 N/A 0.812±0.34 1.216±0.71 0.157±0.06 3.692±1.21 0.036±0.03 0.159±0.08 0.073±0.06 0.450±0.25 0.077±0.03 0.071±0.00
ENSMUST00000173428 0.564±0.09 0.429±0.22 0.462±0.12 N/A 0.968±0.45 0.712±0.26 0.341±0.09 N/A 0.016±0.00 0.128±0.00 N/A 0.203±0.00 0.083±0.00 0.081±0.01
ENSMUSG00000038600 ENSMUST00000040259 N/A N/A N/A N/A N/A N/A N/A 79.767±5.65 N/A N/A 0.091±0.06 1.455±0.02 4.939±0.48 N/A
ENSMUST00000114908 0.434±0.00 N/A N/A N/A N/A N/A N/A 17.281±0.00 N/A 3.261±0.54 0.118±0.06 N/A N/A N/A
ENSMUST00000130816 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132736 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000135594 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138385 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.293±0.00 N/A N/A N/A
ENSMUST00000144752 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000063455 ENSMUST00000117556 1.449±1.38 N/A 0.504±0.11 3.500±2.35 0.193±0.09 N/A N/A N/A 0.168±0.05 N/A 0.028±0.01 0.848±0.20 N/A N/A
ENSMUST00000127925 N/A 0.774±0.02 N/A N/A 0.525±0.07 N/A N/A N/A N/A N/A 0.077±0.00 N/A N/A N/A
ENSMUST00000144973 N/A N/A N/A 2.691±0.00 N/A N/A N/A N/A N/A N/A 0.049±0.01 1.304±0.00 2.406±1.45 0.735±0.00
ENSMUST00000149557 N/A N/A N/A N/A 0.476±0.00 N/A N/A N/A N/A N/A N/A 4.457±1.01 N/A N/A
ENSMUST00000152464 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000169256 2.522±1.83 0.607±0.10 1.384±0.25 6.050±3.07 0.148±0.00 0.339±0.00 N/A 7.307±2.04 0.157±0.04 1.319±0.17 0.020±0.01 1.075±0.79 1.111±0.91 0.188±0.12

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