C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002QK_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000039435-ENSDARG00000039434 CGP 7955 13:23950478-24106867
GeneTranscriptPositionBiotype
ENSDARG00000039434 (oprm1)
opioid receptor, mu 1 		ENSDART00000057611 (oprm1-001) 24067602-24106867 protein_coding
ENSDARG00000039435 (rgs17)
regulator of G-protein signaling 17 		ENSDART00000057612 (rgs17-001) 23952066-23980590 protein_coding
ENSDART00000124152 (rgs17-201) 23950478-23978198 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0002QK_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000091844-ENSG00000112038 CGP 9606 6:153004459-154246867
GeneTranscriptPositionBiotype
ENSG00000074706 (IPCEF1)
interaction protein for cytohesin exchange factors 1 		ENST00000265198 (IPCEF1-001) 154154609-154356766 protein_coding
ENST00000367220 (IPCEF1-004) 154159612-154356735 protein_coding
ENST00000422970 (IPCEF1-005) 154158074-154330081 protein_coding
ENST00000470622 (IPCEF1-003) 154154496-154159516 processed_transcript
ENST00000484827 (IPCEF1-002) 154199829-154214313 retained_intron
ENST00000517438 (IPCEF1-011) 154200018-154246856 protein_coding
ENST00000518162 (IPCEF1-012) 154222961-154247580 retained_intron
ENST00000519091 (IPCEF1-013) 154199723-154219189 processed_transcript
ENST00000519190 (IPCEF1-009) 154214257-154247422 protein_coding
ENST00000519344 (IPCEF1-006) 154159682-154247682 protein_coding
ENST00000519405 (IPCEF1-010) 154212835-154247231 protein_coding
ENST00000520261 (IPCEF1-008) 154246599-154356792 protein_coding
ENST00000522590 (IPCEF1-007) 154158924-154213330 retained_intron
ENSG00000091844 (RGS17)
regulator of G-protein signaling 17 		ENST00000206262 (RGS17-201) 153010722-153131249 protein_coding
ENST00000367225 (RGS17-001) 153004459-153044043 protein_coding
ENSG00000213121 (RP11-306O13.1)
 ENST00000392385 (RP11-306O13.1-001) 153231320-153347488 lincRNA
ENSG00000216713 (MTND4P13)
MT-ND4 pseudogene 13 		ENST00000402078 (MTND4P13-001) 153668879-153669901 processed_pseudogene
ENSG00000217044 (RP11-331O9.4)
 ENST00000405526 (RP11-331O9.4-001) 153667318-153668106 processed_pseudogene
ENSG00000217085 (HMGB3P19)
high mobility group box 3 pseudogene 19 		ENST00000403971 (HMGB3P19-001) 153938433-153938992 processed_pseudogene
ENSG00000217160 (RP11-331O9.1)
 ENST00000402702 (RP11-331O9.1-001) 153665707-153666390 processed_pseudogene
ENSG00000218426 (RP11-475C16.1)
 ENST00000492974 (RP11-475C16.1-001) 153282287-153282733 processed_pseudogene
ENSG00000218776 (RP11-331O9.3)
 ENST00000406985 (RP11-331O9.3-001) 153666627-153667318 processed_pseudogene
ENSG00000220514 (RP11-331O9.6)
 ENST00000402379 (RP11-331O9.6-001) 153668589-153668858 processed_pseudogene
ENSG00000220733 (RP11-331O9.5)
 ENST00000407663 (RP11-331O9.5-001) 153668177-153668362 processed_pseudogene
ENSG00000237312 (RP11-475C16.2)
 ENST00000436953 (RP11-475C16.2-001) 153304595-153308982 lincRNA
ENSG00000237593 (RP11-317B3.2)
 ENST00000456309 (RP11-317B3.2-001) 154216931-154217489 processed_pseudogene
ENSG00000242246 (RP11-331O9.2)
 ENST00000406098 (RP11-331O9.2-001) 153666466-153666666 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002QK_0001ENSDARG00000039434ENSDART00000057611ENSDARG00000039435ENSDART00000057612ENSDART00000124152CIL_0002QK_0002ENSG00000074706ENST00000265198ENST00000367220ENST00000422970ENST00000470622ENST00000484827ENST00000517438ENST00000518162ENST00000519091ENST00000519190ENST00000519344ENST00000519405ENST00000520261ENST00000522590ENSG00000091844ENST00000206262ENST00000367225ENSG00000213121ENST00000392385ENSG00000216713ENST00000402078ENSG00000217044ENST00000405526ENSG00000217085ENST00000403971ENSG00000217160ENST00000402702ENSG00000218426ENST00000492974ENSG00000218776ENST00000406985ENSG00000220514ENST00000402379ENSG00000220733ENST00000407663ENSG00000237312ENST00000436953ENSG00000237593ENST00000456309ENSG00000242246ENST00000406098
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002QK_0001ENSDARG00000039434ENSDART00000057611ENSDARG00000039435ENSDART00000057612ENSDART00000124152CIL_0002QK_0002ENSG00000074706ENST00000265198ENSG00000091844ENST00000206262ENST00000367225ENSG00000213121ENST00000392385ENSG00000216713ENST00000402078ENSG00000217044ENST00000405526ENSG00000217085ENST00000403971ENSG00000217160ENST00000402702ENSG00000218426ENST00000492974ENSG00000218776ENST00000406985ENSG00000220514ENST00000402379ENSG00000220733ENST00000407663ENSG00000237312ENST00000436953ENSG00000237593ENST00000456309ENSG00000242246ENST00000406098
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000039434 ENSDART00000057611 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.087±0.00 N/A N/A N/A
ENSDARG00000039435 ENSDART00000057612 N/A N/A N/A 8.657±0.00 N/A N/A 2.091±0.87 0.674±0.00 0.036±0.00 N/A N/A N/A N/A N/A
ENSDART00000124152 N/A N/A N/A 5.271±1.14 N/A N/A 1.319±0.96 0.108±0.06 0.026±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000074706 ENST00000265198 N/A N/A N/A 8.576±2.83 N/A N/A N/A 1.551±0.00 N/A 0.646±0.00 N/A 0.254±0.00 0.218±0.03 N/A
ENST00000367220 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000422970 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470622 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484827 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000517438 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000518162 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519091 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519190 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519344 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519405 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520261 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522590 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000091844 ENST00000206262 0.474±0.00 N/A 0.183±0.00 1.606±0.00 N/A N/A N/A N/A N/A 0.218±0.00 0.017±0.00 0.050±0.00 0.023±0.01 0.342±0.00
ENST00000367225 0.290±0.00 0.067±0.00 N/A 0.163±0.07 0.173±0.00 0.080±0.00 0.044±0.02 0.177±0.11 0.016±0.00 0.132±0.05 0.027±0.00 0.038±0.00 0.013±0.00 0.176±0.07
ENSG00000213121 ENST00000392385 0.131±0.00 0.610±0.00 1.017±0.00 1.015±0.43 1.438±1.18 0.894±0.82 0.580±0.34 0.724±0.38 1.744±1.62 1.436±1.28 0.232±0.17 1.363±0.77 0.552±0.10 1.781±1.15
ENSG00000216713 ENST00000402078 N/A N/A N/A N/A 0.010±0.00 N/A N/A N/A N/A N/A 0.019±0.00 N/A N/A 1.030±0.00
ENSG00000217044 ENST00000405526 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.866±0.79
ENSG00000217085 ENST00000403971 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.027±0.00
ENSG00000217160 ENST00000402702 N/A N/A N/A N/A N/A N/A 0.152±0.00 N/A N/A N/A N/A N/A N/A 0.753±0.00
ENSG00000218426 ENST00000492974 0.258±0.00 0.413±0.00 N/A 0.198±0.00 0.144±0.00 0.662±0.00 0.211±0.00 0.235±0.00 0.090±0.05 0.317±0.00 0.600±0.00 1.865±2.08 1.681±1.21 0.194±0.01
ENSG00000218776 ENST00000406985 N/A N/A N/A N/A N/A N/A 0.280±0.00 N/A N/A N/A N/A N/A N/A 0.696±0.68
ENSG00000220514 ENST00000402379 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.291±0.00
ENSG00000220733 ENST00000407663 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.633±0.00
ENSG00000237312 ENST00000436953 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.077±0.00
ENSG00000237593 ENST00000456309 N/A 0.306±0.00 N/A 0.341±0.00 0.394±0.00 0.797±0.00 0.042±0.00 N/A N/A 0.066±0.00 N/A 0.094±0.03 N/A N/A
ENSG00000242246 ENST00000406098 N/A N/A N/A N/A N/A N/A N/A 1.314±0.00 N/A N/A N/A N/A N/A N/A

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