C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002QN_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000043470-ENSDARG00000043475 CGP 7955 20:13505025-13637154
GeneTranscriptPositionBiotype
ENSDARG00000025091 (ezrb)
ezrin b 		ENSDART00000078893 (ezrb-001) 13482834-13540362 protein_coding
ENSDART00000125218 (ezrb-002) 13508254-13538656 protein_coding
ENSDART00000152499 (ezrb-003) 13525531-13538782 protein_coding
ENSDARG00000043470 (rsph3)
radial spoke head 3 homolog (Chlamydomonas) 		ENSDART00000063823 (rsph3-201) 13505025-13555372 protein_coding
ENSDART00000103394 (rsph3-202) 13547301-13555372 protein_coding
ENSDART00000128823 (rsph3-001) 13547300-13555372 protein_coding
ENSDARG00000043475 (tagapb)
T-cell activation RhoGTPase activating protein b 		ENSDART00000063826 (tagapb-001) 13564419-13575374 protein_coding
ENSDART00000127654 (tagapb-201) 13563255-13637154 protein_coding
ENSDART00000152804 (tagapb-002) 13569359-13574207 retained_intron

Danio rerio Ensembl (Zv9)

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CIL_0002QN_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000130363-ENSG00000164691 CGP 9606 6:158972871-159045152
GeneTranscriptPositionBiotype
ENSG00000130363 (RSPH3)
radial spoke 3 homolog (Chlamydomonas) 		ENST00000252655 (RSPH3-201) 158977236-159000166 protein_coding
ENST00000367069 (RSPH3-001) 158972871-159000187 protein_coding
ENST00000449822 (RSPH3-002) 158976834-158999781 protein_coding
ENST00000607398 (RSPH3-003) 158975391-158976842 processed_transcript
ENSG00000164691 (TAGAP)
T-cell activation RhoGTPase activating protein 		ENST00000326965 (TAGAP-002) 159035137-159045152 protein_coding
ENST00000338313 (TAGAP-003) 159038912-159045018 protein_coding
ENST00000367066 (TAGAP-001) 159034468-159045152 protein_coding

Homo sapiens Ensembl (GRCh38)

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CIL_0002QN_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000023806-ENSMUSG00000052031 CGP 10090 17:6904716-6961156
GeneTranscriptPositionBiotype
ENSMUSG00000023806 (Rsph3b)
radial spoke 3B homolog (Chlamydomonas) 		ENSMUST00000024572 (Rsph3b-201) 6904716-6948356 protein_coding
ENSMUSG00000052031 (Tagap1)
T cell activation GTPase activating protein 1 		ENSMUST00000063683 (Tagap1-201) 6954965-6961156 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002QN_0001ENSDARG00000025091ENSDART00000078893ENSDART00000125218ENSDART00000152499ENSDARG00000043470ENSDART00000063823ENSDART00000103394ENSDART00000128823ENSDARG00000043475ENSDART00000063826ENSDART00000127654ENSDART00000152804CIL_0002QN_0002ENSG00000130363ENST00000252655ENST00000367069ENST00000449822ENST00000607398ENSG00000164691ENST00000326965ENST00000338313ENST00000367066CIL_0002QN_0003ENSMUSG00000023806ENSMUST00000024572ENSMUSG00000052031ENSMUST00000063683
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002QN_0001ENSDARG00000025091ENSDART00000078893ENSDARG00000043470ENSDART00000063823ENSDART00000103394ENSDART00000128823ENSDARG00000043475ENSDART00000063826ENSDART00000127654CIL_0002QN_0002ENSG00000130363ENST00000252655ENST00000367069ENSG00000164691ENST00000326965ENST00000338313ENST00000367066CIL_0002QN_0003ENSMUSG00000023806ENSMUST00000024572ENSMUSG00000052031ENSMUST00000063683
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000025091 ENSDART00000078893 N/A N/A N/A 9.563±0.00 N/A N/A 8.418±1.84 11.716±1.95 1.907±0.00 N/A 10.181±0.00 N/A N/A N/A
ENSDART00000125218 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000152499 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000043470 ENSDART00000063823 N/A N/A N/A 0.099±0.00 N/A N/A N/A 0.335±0.29 N/A N/A N/A N/A N/A N/A
ENSDART00000103394 N/A N/A N/A N/A N/A N/A 0.070±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000128823 N/A N/A N/A 1.213±0.00 N/A N/A 0.408±0.23 N/A N/A N/A 0.621±0.00 N/A N/A N/A
ENSDARG00000043475 ENSDART00000063826 N/A N/A N/A 0.633±0.00 N/A N/A 1.159±0.00 3.781±0.00 0.148±0.00 N/A N/A N/A N/A N/A
ENSDART00000127654 N/A N/A N/A N/A N/A N/A N/A 13.553±0.00 0.038±0.00 N/A N/A N/A N/A N/A
ENSDART00000152804 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000130363 ENST00000252655 1.158±0.00 N/A 1.081±0.00 1.787±0.30 0.552±0.00 0.946±0.00 0.792±0.48 0.468±0.00 1.680±0.00 N/A 0.570±0.00 4.035±2.21 1.997±0.85 17.306±10.15
ENST00000367069 0.431±0.00 0.863±0.00 N/A 0.977±0.00 0.613±0.36 N/A 1.367±0.00 1.373±0.89 0.241±0.00 1.036±0.45 0.264±0.00 1.161±0.43 0.521±0.13 1.649±0.28
ENST00000449822 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000607398 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000164691 ENST00000326965 0.505±0.00 4.228±0.00 N/A N/A 1.629±0.00 N/A 0.220±0.00 N/A N/A 3.830±0.00 N/A 1.366±0.00 1.613±0.33 N/A
ENST00000338313 N/A N/A N/A N/A 1.170±0.00 N/A N/A N/A N/A 3.094±0.00 N/A N/A N/A N/A
ENST00000367066 N/A 3.557±0.00 N/A N/A 0.642±0.00 N/A N/A 0.487±0.00 0.214±0.00 2.241±0.00 N/A N/A 1.089±0.00 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000023806 ENSMUST00000024572 5.920±0.29 4.038±1.27 7.515±3.27 4.047±3.72 5.099±3.60 5.741±5.38 7.758±2.51 11.283±1.48 4.712±2.59 9.928±0.88 2.971±0.43 7.614±5.25 1.470±0.95 24.275±11.71
ENSMUSG00000052031 ENSMUST00000063683 1.934±0.57 3.143±0.37 4.708±0.51 8.967±5.16 5.326±1.34 5.160±0.98 1.715±0.77 5.436±2.02 3.612±1.60 2.434±1.40 4.322±1.08 6.768±1.20 2.863±0.87 10.869±6.49

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