C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0002S9_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000129351-ENSG00000213339 CGP 9606 19:10654261-10713437
GeneTranscriptPositionBiotype
ENSG00000213339 (QTRT1)
queuine tRNA-ribosyltransferase 1
ENST00000250237 (QTRT1-001) 10701451-10713365 protein_coding
ENST00000421333 (QTRT1-003) 10701454-10713437 nonsense_mediated_decay
ENST00000585885 (QTRT1-010) 10701454-10709138 processed_transcript
ENST00000587500 (QTRT1-012) 10712663-10713364 retained_intron
ENST00000587599 (QTRT1-008) 10701466-10712397 nonsense_mediated_decay
ENST00000587861 (QTRT1-005) 10711040-10713364 retained_intron
ENST00000589488 (QTRT1-002) 10701430-10713345 retained_intron
ENST00000590705 (QTRT1-006) 10701454-10712256 retained_intron
ENST00000591643 (QTRT1-009) 10707306-10712255 protein_coding
ENST00000592254 (QTRT1-007) 10701471-10707563 protein_coding
ENST00000592376 (QTRT1-011) 10712563-10713359 protein_coding
ENST00000592531 (QTRT1-013) 10712918-10713364 retained_intron
CIL_0002S9_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000032178-ENSMUSG00000002825 CGP 10090 9:21368019-21420277
GeneTranscriptPositionBiotype
ENSMUSG00000002825 (Qtrt1)
queuine tRNA-ribosyltransferase 1
ENSMUST00000002902 (Qtrt1-201) 21411837-21420277 protein_coding
ENSMUSG00000032178 (Ilf3)
interleukin enhancer binding factor 3
ENSMUST00000067646 (Ilf3-201) 21368019-21405361 protein_coding
ENSMUST00000115414 (Ilf3-202) 21368019-21401803 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002S9_0001ENSG00000213339ENST00000250237ENST00000421333ENST00000585885ENST00000587500ENST00000587599ENST00000587861ENST00000589488ENST00000590705ENST00000591643ENST00000592254ENST00000592376ENST00000592531CIL_0002S9_0002ENSMUSG00000002825ENSMUST00000002902ENSMUSG00000032178ENSMUST00000067646ENSMUST00000115414
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002S9_0001ENSG00000213339ENST00000250237ENST00000587861ENST00000589488ENST00000590705ENST00000592376CIL_0002S9_0002ENSMUSG00000002825ENSMUST00000002902ENSMUSG00000032178ENSMUST00000067646ENSMUST00000115414
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000213339 ENST00000250237 14.136±0.00 13.110±0.00 N/A 3.034±2.26 11.037±0.00 8.314±7.34 4.105±0.00 7.810±0.00 3.363±0.00 9.709±0.00 14.382±0.00 16.694±12.62 9.450±3.90 6.201±3.87
ENST00000421333 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000585885 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587500 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587599 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587861 N/A N/A N/A 0.418±0.00 N/A 0.464±0.00 N/A 1.293±0.07 N/A N/A N/A 3.303±0.00 N/A 1.556±0.00
ENST00000589488 N/A 6.954±0.00 1.711±0.00 N/A 2.634±1.92 1.273±0.00 N/A 7.283±0.00 N/A N/A 1.138±0.00 17.419±3.82 2.599±0.56 6.517±3.84
ENST00000590705 N/A N/A N/A N/A N/A N/A 0.648±0.00 N/A 1.080±0.00 N/A N/A N/A N/A N/A
ENST00000591643 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592254 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592376 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.163±0.00 20.979±0.00 N/A N/A
ENST00000592531 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000002825 ENSMUST00000002902 11.226±5.73 11.336±1.16 11.474±1.61 12.915±7.81 16.065±1.86 17.253±3.02 5.060±1.29 7.062±0.72 9.966±6.70 8.513±1.40 1.892±0.67 19.107±6.06 8.628±3.69 7.153±0.38
ENSMUSG00000032178 ENSMUST00000067646 8.910±5.45 7.955±2.85 9.102±0.06 24.136±5.40 5.851±3.42 5.780±2.23 4.292±0.93 6.390±1.76 5.971±4.84 8.444±2.83 3.428±1.11 21.460±7.98 12.032±2.85 20.015±3.57
ENSMUST00000115414 4.363±1.81 2.539±0.00 4.109±0.00 11.098±7.40 2.574±0.45 1.740±0.18 1.946±0.41 1.604±0.09 2.424±1.83 2.824±0.00 1.300±0.38 13.145±4.14 7.377±2.72 6.584±0.52

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