C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002SQ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000147689-ENSG00000189376 CGP 9606 8:123178960-123241398
GeneTranscriptPositionBiotype
ENSG00000147689 (FAM83A)
family with sequence similarity 83, member A 		ENST00000276699 (FAM83A-002) 123182681-123210074 protein_coding
ENST00000518448 (FAM83A-001) 123179047-123209762 protein_coding
ENST00000520541 (FAM83A-005) 123179098-123182583 retained_intron
ENST00000521468 (FAM83A-004) 123183158-123199994 processed_transcript
ENST00000522648 (FAM83A-003) 123182681-123210078 protein_coding
ENST00000523412 (FAM83A-006) 123179114-123180719 processed_transcript
ENST00000523819 (FAM83A-007) 123178960-123180615 processed_transcript
ENST00000536633 (FAM83A-201) 123179047-123210079 protein_coding
ENSG00000189376 (C8orf76)
chromosome 8 open reading frame 76 		ENST00000276704 (C8orf76-001) 123219957-123241398 protein_coding
ENST00000517760 (C8orf76-008) 123226360-123231592 processed_transcript
ENST00000518996 (C8orf76-005) 123231404-123239386 retained_intron
ENST00000519791 (C8orf76-004) 123220195-123241286 processed_transcript
ENST00000521310 (C8orf76-007) 123226498-123241344 processed_transcript
ENST00000522477 (C8orf76-003) 123239640-123241377 processed_transcript
ENST00000523726 (C8orf76-006) 123238569-123241355 retained_intron
ENSG00000204949 (FAM83A-AS1)
FAM83A antisense RNA 1 		ENST00000517519 (FAM83A-AS1-002) 123201172-123202743 antisense
ENST00000520576 (FAM83A-AS1-001) 123201172-123202743 antisense
ENST00000523330 (FAM83A-AS1-003) 123201172-123202743 antisense
ENSG00000221461 (U3)
Small nucleolar RNA U3 		ENST00000408534 (U3.1-242) 123180310-123180525 snoRNA
ENSG00000243498 (UBA52P5)
ubiquitin A-52 residue ribosomal protein fusion product 1 pseudogene 5 		ENST00000461723 (UBA52P5-001) 123236852-123237062 processed_pseudogene
ENSG00000253258 (RP11-539E17.5)
 ENST00000522383 (RP11-539E17.5-001) 123181638-123182788 antisense
CIL_0002SQ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000051225-ENSMUSG00000101892 CGP 10090 15:57985419-58034325
GeneTranscriptPositionBiotype
ENSMUSG00000051225 (Fam83a)
family with sequence similarity 83, member A 		ENSMUST00000050374 (Fam83a-002) 57985910-57995602 protein_coding
ENSMUST00000160942 (Fam83a-001) 57985419-58011009 protein_coding
ENSMUST00000161231 (Fam83a-003) 58002146-58010047 processed_transcript
ENSMUSG00000101892 (9130401M01Rik)
RIKEN cDNA 9130401M01 gene 		ENSMUST00000100655 (9130401M01Rik-001) 58022259-58034315 protein_coding
ENSMUST00000185553 (9130401M01Rik-003) 58030956-58034325 protein_coding
ENSMUST00000187062 (9130401M01Rik-004) 58022270-58027895 processed_transcript
ENSMUST00000189159 (9130401M01Rik-002) 58028812-58034190 nonsense_mediated_decay

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002SQ_0001ENSG00000147689ENST00000276699ENST00000518448ENST00000520541ENST00000521468ENST00000522648ENST00000523412ENST00000523819ENST00000536633ENSG00000189376ENST00000276704ENST00000517760ENST00000518996ENST00000519791ENST00000521310ENST00000522477ENST00000523726ENSG00000204949ENST00000517519ENST00000520576ENST00000523330ENSG00000221461ENST00000408534ENSG00000243498ENST00000461723ENSG00000253258ENST00000522383CIL_0002SQ_0002ENSMUSG00000051225ENSMUST00000050374ENSMUST00000160942ENSMUST00000161231ENSMUSG00000101892ENSMUST00000100655ENSMUST00000185553ENSMUST00000187062ENSMUST00000189159
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002SQ_0001ENSG00000147689ENST00000276699ENST00000518448ENST00000521468ENST00000522648ENST00000523412ENSG00000189376ENST00000276704ENST00000517760ENSG00000204949ENST00000517519ENST00000520576ENST00000523330ENSG00000221461ENST00000408534ENSG00000243498ENST00000461723ENSG00000253258ENST00000522383CIL_0002SQ_0002ENSMUSG00000051225ENSMUST00000050374ENSMUST00000160942ENSMUST00000161231ENSMUSG00000101892ENSMUST00000100655
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000147689 ENST00000276699 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.087±0.00 0.114±0.02
ENST00000518448 0.056±0.00 0.077±0.00 N/A 0.004±0.00 N/A 0.023±0.00 0.032±0.00 N/A 0.029±0.00 N/A N/A 0.063±0.00 0.028±0.00 0.120±0.00
ENST00000520541 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521468 N/A N/A N/A 0.073±0.00 N/A N/A N/A N/A N/A N/A N/A 1.048±0.00 N/A N/A
ENST00000522648 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.317±0.00 N/A 0.874±0.00 1.427±0.58 0.303±0.00
ENST00000523412 N/A 0.156±0.00 N/A N/A 0.480±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523819 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000536633 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000189376 ENST00000276704 N/A 6.884±0.00 N/A N/A N/A 4.721±0.00 N/A N/A N/A N/A 3.900±0.45 9.676±1.40 7.085±1.30 10.575±0.00
ENST00000517760 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 22.044±0.00 11.450±0.00 N/A
ENST00000518996 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519791 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521310 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522477 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523726 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000204949 ENST00000517519 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.298±0.00 0.081±0.00 0.107±0.00
ENST00000520576 N/A 0.129±0.00 N/A N/A N/A N/A N/A N/A N/A 0.096±0.00 N/A 0.182±0.00 N/A 0.264±0.00
ENST00000523330 0.055±0.00 N/A N/A 0.041±0.00 0.019±0.00 N/A N/A N/A 16.553±0.00 N/A N/A 0.045±0.00 N/A 0.100±0.00
ENSG00000221461 ENST00000408534 N/A N/A N/A 0.089±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000243498 ENST00000461723 0.341±0.00 1.120±0.00 N/A 0.285±0.00 0.407±0.00 0.246±0.00 0.113±0.00 0.398±0.00 N/A 0.506±0.00 0.539±0.00 1.510±1.17 N/A 0.450±0.00
ENSG00000253258 ENST00000522383 N/A N/A N/A 0.179±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000051225 ENSMUST00000050374 2.853±1.67 N/A N/A 0.043±0.00 1.037±0.35 0.048±0.00 0.169±0.12 0.128±0.05 0.135±0.05 0.355±0.00 N/A 0.317±0.21 0.060±0.03 N/A
ENSMUST00000160942 3.866±2.95 2.231±0.76 0.065±0.00 0.031±0.02 2.485±1.05 0.072±0.00 0.068±0.04 0.228±0.09 0.525±0.64 0.487±0.13 0.052±0.03 0.383±0.19 0.086±0.08 0.878±0.39
ENSMUST00000161231 8.046±6.66 1.593±0.00 0.914±0.17 N/A 6.028±1.35 0.150±0.05 0.339±0.18 0.299±0.16 0.445±0.38 1.309±0.58 0.244±0.16 1.120±0.54 0.159±0.12 2.289±0.53
ENSMUSG00000101892 ENSMUST00000100655 18.834±4.46 11.727±3.86 13.557±0.98 21.929±2.82 12.903±3.71 7.403±2.57 4.612±0.86 9.410±2.47 9.096±2.74 10.498±1.34 9.693±1.57 15.887±7.19 20.052±6.69 3.186±0.00
ENSMUST00000185553 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000187062 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000189159 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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