C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002TT_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000013842-ENSDARG00000001776 CGP 7955 7:62891154-63081632
GeneTranscriptPositionBiotype
ENSDARG00000001776 (stim2b)
stromal interaction molecule 2b 		ENSDART00000012089 (stim2b-201) 62964154-63081632 protein_coding
ENSDARG00000013842 (tbc1d19)
TBC1 domain family, member 19 		ENSDART00000025308 (tbc1d19-001) 62891154-62955428 protein_coding
ENSDART00000141016 (tbc1d19-002) 62910920-62933457 retained_intron
CIL_0002TT_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000109680-ENSG00000109689 CGP 9606 4:26576437-27025381
GeneTranscriptPositionBiotype
ENSG00000109680 (TBC1D19)
TBC1 domain family, member 19 		ENST00000264866 (TBC1D19-001) 26583916-26755351 protein_coding
ENST00000502873 (TBC1D19-002) 26584084-26754227 retained_intron
ENST00000504442 (TBC1D19-006) 26576696-26666405 processed_transcript
ENST00000505206 (TBC1D19-007) 26584089-26683722 protein_coding
ENST00000511789 (TBC1D19-003) 26584194-26754947 protein_coding
ENST00000512840 (TBC1D19-004) 26576682-26688348 protein_coding
ENST00000513455 (TBC1D19-005) 26576437-26620667 protein_coding
ENST00000513596 (TBC1D19-008) 26584954-26640155 protein_coding
ENST00000515568 (TBC1D19-009) 26584282-26663073 processed_transcript
ENSG00000109689 (STIM2)
stromal interaction molecule 2 		ENST00000463501 (STIM2-007) 26857928-27002394 protein_coding
ENST00000465503 (STIM2-002) 26860841-27023966 protein_coding
ENST00000467011 (STIM2-003) 26860794-27024187 protein_coding
ENST00000467087 (STIM2-001) 26860691-27025381 protein_coding
ENST00000473519 (STIM2-004) 27003000-27022840 protein_coding
ENST00000477474 (STIM2-005) 27008473-27019600 protein_coding
ENST00000478049 (STIM2-006) 26861459-26995402 protein_coding
ENST00000478425 (STIM2-009) 26858248-26858919 processed_transcript
ENST00000494628 (STIM2-008) 26857678-27002228 protein_coding
ENST00000504511 (STIM2-010) 27021282-27022661 retained_intron
ENSG00000200999 (SNORD74)
Small nucleolar RNA SNORD74 		ENST00000364129 (SNORD74.1-204) 26702309-26702388 snoRNA
ENSG00000240005 (RP11-293A21.1)
 ENST00000467484 (RP11-293A21.1-001) 26859806-26860599 antisense
ENST00000472346 (RP11-293A21.1-003) 26859809-26860244 antisense
ENST00000489096 (RP11-293A21.1-002) 26859806-26860581 antisense
ENSG00000248340 (RP11-293A21.2)
 ENST00000511723 (RP11-293A21.2-001) 26873561-26874349 processed_pseudogene
ENSG00000265627 (AC093807.1)
 ENST00000580172 (AC093807.1-201) 26637390-26637490 miRNA
CIL_0002TT_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000039178-ENSMUSG00000039156 CGP 10090 5:53809627-54121057
GeneTranscriptPositionBiotype
ENSMUSG00000039156 (Stim2)
stromal interaction molecule 2 		ENSMUST00000071083 (Stim2-004) 53998565-54119592 protein_coding
ENSMUST00000117661 (Stim2-001) 53998417-54121057 protein_coding
ENSMUST00000129109 (Stim2-005) 54115857-54118587 retained_intron
ENSMUST00000152812 (Stim2-002) 54105368-54119933 protein_coding
ENSMUST00000155608 (Stim2-003) 54074737-54104489 processed_transcript
ENSMUSG00000039178 (Tbc1d19)
TBC1 domain family, member 19 		ENSMUST00000037337 (Tbc1d19-201) 53809627-53904380 protein_coding
ENSMUSG00000081266 (Gm15820)
predicted gene 15820 		ENSMUST00000121316 (Gm15820-001) 54094001-54095041 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002TT_0001ENSDARG00000001776ENSDART00000012089ENSDARG00000013842ENSDART00000025308ENSDART00000141016CIL_0002TT_0002ENSG00000109680ENST00000264866ENST00000502873ENST00000504442ENST00000505206ENST00000511789ENST00000512840ENST00000513455ENST00000513596ENST00000515568ENSG00000109689ENST00000463501ENST00000465503ENST00000467011ENST00000467087ENST00000473519ENST00000477474ENST00000478049ENST00000478425ENST00000494628ENST00000504511ENSG00000200999ENST00000364129ENSG00000240005ENST00000467484ENST00000472346ENST00000489096ENSG00000248340ENST00000511723ENSG00000265627ENST00000580172CIL_0002TT_0003ENSMUSG00000039156ENSMUST00000071083ENSMUST00000117661ENSMUST00000129109ENSMUST00000152812ENSMUST00000155608ENSMUSG00000039178ENSMUST00000037337ENSMUSG00000081266ENSMUST00000121316
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002TT_0001ENSDARG00000001776ENSDART00000012089ENSDARG00000013842ENSDART00000025308ENSDART00000141016CIL_0002TT_0002ENSG00000109680ENST00000264866ENST00000502873ENST00000504442ENST00000505206ENST00000511789ENST00000512840ENST00000513596ENST00000515568ENSG00000109689ENST00000463501ENST00000465503ENST00000467011ENST00000467087ENST00000473519ENST00000477474ENSG00000200999ENST00000364129ENSG00000240005ENST00000467484ENST00000489096ENSG00000248340ENST00000511723ENSG00000265627ENST00000580172CIL_0002TT_0003ENSMUSG00000039156ENSMUST00000071083ENSMUST00000117661ENSMUST00000129109ENSMUST00000152812ENSMUSG00000039178ENSMUST00000037337ENSMUSG00000081266ENSMUST00000121316
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000001776 ENSDART00000012089 N/A N/A N/A 0.214±0.16 N/A N/A 0.185±0.02 0.674±0.00 0.064±0.00 N/A 2.261±0.00 N/A N/A N/A
ENSDARG00000013842 ENSDART00000025308 N/A N/A N/A 2.878±1.01 N/A N/A 2.261±0.67 0.655±0.45 0.099±0.00 N/A 0.658±0.00 N/A N/A N/A
ENSDART00000141016 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.365±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000109680 ENST00000264866 0.356±0.00 N/A N/A 0.935±0.00 0.657±0.00 0.731±0.00 0.901±0.33 0.975±0.00 0.115±0.00 0.760±0.00 0.138±0.00 0.653±0.39 0.994±0.37 1.443±0.39
ENST00000502873 N/A N/A N/A N/A 0.301±0.00 0.398±0.19 N/A 0.151±0.00 0.646±0.00 N/A 0.123±0.00 0.976±0.69 N/A 0.538±0.00
ENST00000504442 N/A N/A 1.673±0.00 N/A N/A N/A N/A N/A N/A N/A 0.050±0.00 N/A N/A N/A
ENST00000505206 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.288±0.00 N/A N/A
ENST00000511789 0.743±0.00 0.465±0.00 N/A 1.198±0.12 0.795±0.00 1.160±0.00 0.639±0.00 2.189±0.00 0.118±0.00 0.547±0.00 0.619±0.00 1.357±0.18 0.782±0.48 1.299±0.00
ENST00000512840 N/A 0.166±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513455 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513596 N/A N/A N/A N/A N/A N/A N/A 0.145±0.00 N/A N/A N/A N/A N/A N/A
ENST00000515568 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.378±0.00 N/A N/A 0.861±0.00
ENSG00000109689 ENST00000463501 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.477±0.00 2.393±0.00 N/A N/A
ENST00000465503 3.611±0.00 7.117±0.00 0.489±0.00 3.779±1.57 2.850±0.12 2.493±0.00 1.222±0.00 1.546±0.57 1.484±0.28 3.820±0.66 0.824±0.00 3.383±1.80 2.084±0.87 2.230±0.00
ENST00000467011 N/A N/A N/A 0.985±0.00 0.882±0.00 0.513±0.00 0.276±0.00 1.260±0.00 0.695±0.00 1.317±0.00 0.359±0.14 2.503±1.20 2.084±1.64 3.204±0.77
ENST00000467087 0.875±0.00 N/A 0.300±0.00 1.016±0.00 0.910±0.00 N/A N/A N/A 0.395±0.14 N/A N/A 2.609±1.36 N/A 0.704±0.00
ENST00000473519 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.881±0.00 N/A N/A N/A
ENST00000477474 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.568±0.00 N/A N/A N/A
ENST00000478049 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478425 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494628 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000504511 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000200999 ENST00000364129 N/A N/A N/A N/A 1.493±0.00 N/A N/A N/A N/A 6.376±0.00 N/A 1.896±0.00 N/A 3.597±0.00
ENSG00000240005 ENST00000467484 N/A N/A N/A N/A 0.569±0.00 0.038±0.00 N/A N/A 0.078±0.00 0.368±0.00 N/A 0.230±0.15 N/A 5.478±0.05
ENST00000472346 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489096 0.240±0.00 N/A N/A 0.526±0.00 0.903±0.00 N/A 0.332±0.00 N/A 0.636±0.00 N/A N/A 1.077±0.73 0.258±0.00 8.832±4.79
ENSG00000248340 ENST00000511723 N/A 0.291±0.00 0.080±0.00 0.038±0.00 0.216±0.00 N/A N/A 0.068±0.00 0.528±0.00 N/A N/A 0.099±0.05 N/A N/A
ENSG00000265627 ENST00000580172 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.105±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000039156 ENSMUST00000071083 8.309±0.11 9.685±1.75 2.206±0.30 9.850±8.84 11.606±3.06 14.942±1.77 3.217±0.22 4.840±1.45 2.457±1.06 17.274±5.02 7.997±1.36 11.120±2.43 3.084±1.97 2.378±0.19
ENSMUST00000117661 N/A N/A 0.458±0.04 1.669±1.49 N/A N/A 0.490±0.00 N/A 0.267±0.06 N/A N/A 1.873±0.00 0.284±0.14 0.283±0.00
ENSMUST00000129109 N/A 10.038±1.83 N/A N/A N/A 16.537±0.00 N/A N/A 3.200±0.40 N/A N/A N/A N/A N/A
ENSMUST00000152812 N/A 2.372±0.00 1.363±0.29 2.034±0.03 N/A 6.265±1.06 N/A 1.927±0.90 1.147±0.44 3.010±0.00 3.364±0.29 4.726±0.13 1.666±0.65 0.685±0.12
ENSMUST00000155608 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000039178 ENSMUST00000037337 4.718±2.26 4.714±1.99 6.834±0.70 7.943±3.50 3.850±1.11 2.435±0.72 3.105±0.83 7.647±1.99 1.147±0.50 6.717±0.59 2.995±0.62 5.227±1.76 1.842±0.70 6.588±3.00
ENSMUSG00000081266 ENSMUST00000121316 0.159±0.00 N/A 0.036±0.02 N/A 0.196±0.05 0.245±0.21 0.051±0.00 0.092±0.02 0.082±0.05 0.269±0.11 0.072±0.02 0.253±0.02 0.028±0.01 0.071±0.03

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