C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002UD_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000213337-ENSG00000168758 CGP 9606 2:96836611-96870757
GeneTranscriptPositionBiotype
ENSG00000163126 (ANKRD23)
ankyrin repeat domain 23 		ENST00000318357 (ANKRD23-001) 96837912-96844034 protein_coding
ENST00000331001 (ANKRD23-003) 96837915-96844021 protein_coding
ENST00000418232 (ANKRD23-002) 96837914-96844005 protein_coding
ENST00000462692 (ANKRD23-007) 96840059-96857934 processed_transcript
ENST00000476975 (ANKRD23-008) 96824526-96842117 processed_transcript
ENST00000482175 (ANKRD23-004) 96838732-96841242 retained_intron
ENSG00000168758 (SEMA4C)
sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C 		ENST00000305476 (SEMA4C-001) 96859716-96869971 protein_coding
ENST00000442264 (SEMA4C-006) 96865234-96868588 protein_coding
ENST00000449330 (SEMA4C-005) 96865667-96870757 protein_coding
ENST00000467747 (SEMA4C-003) 96859748-96863328 retained_intron
ENST00000474420 (SEMA4C-004) 96859736-96862447 retained_intron
ENST00000482925 (SEMA4C-002) 96859742-96866930 retained_intron
ENSG00000213337 (ANKRD39)
ankyrin repeat domain 39 		ENST00000393537 (ANKRD39-001) 96847985-96858095 protein_coding
ENST00000443120 (ANKRD39-002) 96836611-96858014 nonsense_mediated_decay
CIL_0002UD_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000079610-ENSMUSG00000026121 CGP 10090 1:36538173-36558381
GeneTranscriptPositionBiotype
ENSMUSG00000026121 (Sema4c)
sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C 		ENSMUST00000114991 (Sema4c-201) 36548642-36558381 protein_coding
ENSMUSG00000079610 (Ankrd39)
ankyrin repeat domain 39 		ENSMUST00000001172 (Ankrd39-201) 36538173-36547201 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002UD_0001ENSG00000163126ENST00000318357ENST00000331001ENST00000418232ENST00000462692ENST00000476975ENST00000482175ENSG00000168758ENST00000305476ENST00000442264ENST00000449330ENST00000467747ENST00000474420ENST00000482925ENSG00000213337ENST00000393537ENST00000443120CIL_0002UD_0002ENSMUSG00000026121ENSMUST00000114991ENSMUSG00000079610ENSMUST00000001172
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002UD_0001ENSG00000163126ENST00000318357ENST00000331001ENST00000418232ENST00000462692ENST00000476975ENSG00000168758ENST00000305476ENST00000467747ENST00000474420ENST00000482925ENSG00000213337ENST00000393537ENST00000443120CIL_0002UD_0002ENSMUSG00000026121ENSMUST00000114991ENSMUSG00000079610ENSMUST00000001172
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000163126 ENST00000318357 N/A N/A N/A N/A 9.178±0.00 N/A 3.249±0.00 N/A N/A N/A 192.405±6.45 N/A N/A N/A
ENST00000331001 N/A N/A N/A N/A N/A N/A 0.480±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000418232 N/A N/A N/A N/A 9.269±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 7.450±0.00
ENST00000462692 N/A N/A 1.447±0.00 N/A N/A N/A 0.710±0.00 N/A 2.054±0.00 N/A N/A N/A N/A N/A
ENST00000476975 N/A 3.849±0.00 N/A N/A N/A N/A N/A N/A N/A 5.863±0.00 N/A N/A N/A N/A
ENST00000482175 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000168758 ENST00000305476 13.869±0.00 11.014±0.00 N/A 7.645±6.74 3.439±1.61 9.649±9.35 1.833±1.08 5.277±0.00 5.228±0.00 19.800±0.00 2.261±0.00 17.889±6.89 38.783±19.67 7.354±0.00
ENST00000442264 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000449330 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467747 N/A 4.977±0.00 0.807±0.00 4.068±0.00 1.823±0.00 N/A 0.698±0.00 1.211±0.00 N/A 0.218±0.00 N/A N/A N/A 1.312±0.22
ENST00000474420 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.716±0.00 N/A N/A
ENST00000482925 N/A 3.771±0.00 N/A N/A 1.054±0.00 N/A 0.290±0.00 N/A 1.102±0.00 4.362±0.00 N/A 3.199±1.27 N/A N/A
ENSG00000213337 ENST00000393537 N/A 4.687±0.00 N/A 7.640±1.67 N/A N/A 7.176±0.00 8.421±0.00 10.929±0.00 5.790±0.00 N/A 18.531±1.72 7.781±0.00 N/A
ENST00000443120 N/A 0.868±0.00 0.228±0.00 0.949±0.00 0.453±0.00 0.250±0.00 N/A N/A N/A 0.331±0.00 N/A 1.657±0.54 N/A 1.121±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026121 ENSMUST00000114991 11.374±2.80 8.368±1.90 13.865±2.60 9.756±3.99 7.135±1.67 3.492±1.15 2.301±0.74 2.501±0.56 1.199±0.76 8.532±1.52 2.058±0.74 9.213±3.66 20.340±10.31 N/A
ENSMUSG00000079610 ENSMUST00000001172 6.381±1.74 9.127±2.12 4.379±0.95 4.015±2.21 7.034±3.12 6.199±0.88 2.556±0.49 5.419±1.02 2.152±0.56 5.009±1.59 2.902±0.94 10.950±3.40 3.272±0.92 3.145±1.34

Loading