C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002V2_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000019098-ENSDARG00000056656 CGP 7955 7:27835119-27963050
GeneTranscriptPositionBiotype
ENSDARG00000019098 (cd82a)
CD82 antigen, a 		ENSDART00000010323 (cd82a-201) 27835139-27863988 protein_coding
ENSDART00000149426 (cd82a-001) 27835119-27863990 protein_coding
ENSDARG00000056656 (tspan18a)
tetraspanin 18a 		ENSDART00000134717 (tspan18a-001) 27888876-27963050 protein_coding

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CIL_0002V2_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000026070-ENSDARG00000015015 CGP 7955 18:27520356-27762072
GeneTranscriptPositionBiotype
ENSDARG00000015015 (tspan18b)
tetraspanin 18b 		ENSDART00000141835 (tspan18b-001) 27681193-27762072 protein_coding
ENSDARG00000026070 (cd82b)
CD82 antigen, b 		ENSDART00000030674 (cd82b-201) 27547663-27573194 protein_coding
ENSDART00000134714 (cd82b-002) 27520396-27563611 retained_intron
ENSDART00000147886 (cd82b-001) 27520356-27575299 protein_coding

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CIL_0002V2_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000085117-ENSG00000157570 CGP 9606 11:44564427-44932421
GeneTranscriptPositionBiotype
ENSG00000085117 (CD82)
CD82 molecule 		ENST00000227155 (CD82-001) 44565591-44620363 protein_coding
ENST00000342935 (CD82-002) 44565601-44619126 protein_coding
ENST00000524704 (CD82-013) 44565723-44605125 protein_coding
ENST00000524750 (CD82-011) 44618270-44619709 protein_coding
ENST00000525210 (CD82-003) 44565663-44600209 protein_coding
ENST00000525813 (CD82-009) 44573078-44605407 protein_coding
ENST00000525898 (CD82-010) 44565667-44619383 retained_intron
ENST00000526958 (CD82-008) 44564427-44615295 protein_coding
ENST00000527737 (CD82-005) 44565680-44605438 protein_coding
ENST00000529277 (CD82-007) 44565642-44619334 processed_transcript
ENST00000529853 (CD82-006) 44587232-44594996 retained_intron
ENST00000530601 (CD82-012) 44596856-44618253 protein_coding
ENST00000530931 (CD82-014) 44604428-44619275 processed_transcript
ENST00000532544 (CD82-004) 44565641-44605417 protein_coding
ENSG00000157570 (TSPAN18)
tetraspanin 18 		ENST00000340160 (TSPAN18-201) 44764426-44932421 protein_coding
ENST00000517621 (TSPAN18-004) 44919666-44929456 retained_intron
ENST00000518429 (TSPAN18-002) 44906407-44931336 protein_coding
ENST00000519051 (TSPAN18-007) 44909523-44919974 retained_intron
ENST00000520245 (TSPAN18-003) 44917582-44929280 retained_intron
ENST00000520278 (TSPAN18-006) 44926367-44929556 retained_intron
ENST00000520358 (TSPAN18-001) 44727112-44931332 protein_coding
ENST00000520837 (TSPAN18-008) 44859603-44909839 protein_coding
ENST00000520999 (TSPAN18-009) 44727174-44919321 protein_coding
ENST00000521990 (TSPAN18-005) 44919674-44929420 retained_intron
ENST00000533080 (TSPAN18-012) 44727103-44919995 protein_coding
ENST00000533202 (TSPAN18-011) 44726811-44909880 protein_coding
ENST00000533786 (TSPAN18-010) 44726465-44919318 protein_coding
ENSG00000175274 (TP53I11)
tumor protein p53 inducible protein 11 		ENST00000308212 (TP53I11-201) 44932348-44951306 protein_coding
ENST00000354556 (TP53I11-005) 44885903-44951289 nonsense_mediated_decay
ENST00000395648 (TP53I11-006) 44932348-44950845 protein_coding
ENST00000524774 (TP53I11-018) 44934948-44936056 retained_intron
ENST00000525138 (TP53I11-009) 44936850-44947219 protein_coding
ENST00000525145 (TP53I11-012) 44936804-44950837 nonsense_mediated_decay
ENST00000525667 (TP53I11-016) 44936456-44937250 retained_intron
ENST00000525680 (TP53I11-001) 44933036-44950874 protein_coding
ENST00000525683 (TP53I11-020) 44936843-44943191 protein_coding
ENST00000527685 (TP53I11-019) 44937321-44951042 protein_coding
ENST00000528290 (TP53I11-015) 44935568-44950874 protein_coding
ENST00000528473 (TP53I11-021) 44934980-44950752 protein_coding
ENST00000530035 (TP53I11-008) 44937304-44950894 protein_coding
ENST00000531130 (TP53I11-017) 44935620-44950845 processed_transcript
ENST00000531928 (TP53I11-011) 44936218-44950866 protein_coding
ENST00000532253 (TP53I11-003) 44933483-44950778 nonsense_mediated_decay
ENST00000532921 (TP53I11-013) 44936668-44950833 retained_intron
ENST00000533443 (TP53I11-010) 44936857-44947253 protein_coding
ENST00000533937 (TP53I11-007) 44937555-44950208 protein_coding
ENST00000533940 (TP53I11-004) 44932356-44950160 protein_coding
ENST00000533955 (TP53I11-014) 44935578-44950833 processed_transcript
ENST00000616990 (TP53I11-202) 44932348-44951306 protein_coding
ENSG00000244267 (RPL34P22)
ribosomal protein L34 pseudogene 22 		ENST00000468193 (RPL34P22-001) 44629357-44629674 processed_pseudogene
ENSG00000255032 (RP11-45A12.2)
 ENST00000530039 (RP11-45A12.2-001) 44719392-44736692 lincRNA
ENSG00000255079 (RP11-45A12.1)
 ENST00000532748 (RP11-45A12.1-001) 44694863-44696301 lincRNA
ENSG00000255092 (RP11-58K22.4)
 ENST00000532524 (RP11-58K22.4-001) 44606170-44608101 antisense
ENSG00000275725 (RP11-244C20.2)
 ENST00000616889 (RP11-244C20.2-001) 44656771-44656920 processed_pseudogene

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002V2_0001ENSDARG00000019098ENSDART00000010323ENSDART00000149426ENSDARG00000056656ENSDART00000134717CIL_0002V2_0002ENSDARG00000015015ENSDART00000141835ENSDARG00000026070ENSDART00000030674ENSDART00000134714ENSDART00000147886CIL_0002V2_0003ENSG00000085117ENST00000227155ENST00000342935ENST00000524704ENST00000524750ENST00000525210ENST00000525813ENST00000525898ENST00000526958ENST00000527737ENST00000529277ENST00000529853ENST00000530601ENST00000530931ENST00000532544ENSG00000157570ENST00000340160ENST00000517621ENST00000518429ENST00000519051ENST00000520245ENST00000520278ENST00000520358ENST00000520837ENST00000520999ENST00000521990ENST00000533080ENST00000533202ENST00000533786ENSG00000175274ENST00000308212ENST00000354556ENST00000395648ENST00000524774ENST00000525138ENST00000525145ENST00000525667ENST00000525680ENST00000525683ENST00000527685ENST00000528290ENST00000528473ENST00000530035ENST00000531130ENST00000531928ENST00000532253ENST00000532921ENST00000533443ENST00000533937ENST00000533940ENST00000533955ENST00000616990ENSG00000244267ENST00000468193ENSG00000255032ENST00000530039ENSG00000255079ENST00000532748ENSG00000255092ENST00000532524ENSG00000275725ENST00000616889
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002V2_0001ENSDARG00000019098ENSDART00000010323ENSDART00000149426ENSDARG00000056656ENSDART00000134717CIL_0002V2_0002ENSDARG00000015015ENSDART00000141835ENSDARG00000026070ENSDART00000030674ENSDART00000134714ENSDART00000147886CIL_0002V2_0003ENSG00000085117ENST00000227155ENST00000342935ENST00000524704ENST00000524750ENST00000525813ENST00000525898ENST00000529277ENST00000529853ENST00000530601ENST00000530931ENSG00000157570ENST00000340160ENST00000520358ENST00000520999ENST00000533786ENSG00000175274ENST00000308212ENST00000354556ENST00000395648ENST00000525680ENST00000531928ENST00000532253ENST00000533940ENST00000616990ENSG00000244267ENST00000468193ENSG00000255032ENST00000530039ENSG00000255079ENST00000532748ENSG00000255092ENST00000532524ENSG00000275725ENST00000616889
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000019098 ENSDART00000010323 N/A N/A N/A 53.021±12.92 N/A N/A 94.292±28.85 18.351±10.02 N/A N/A 14.852±0.00 N/A N/A N/A
ENSDART00000149426 N/A N/A N/A 28.947±13.30 N/A N/A 17.923±2.05 3.815±0.15 0.908±0.00 N/A 1.570±0.00 N/A N/A N/A
ENSDARG00000056656 ENSDART00000134717 N/A N/A N/A 57.255±8.03 N/A N/A 6.152±1.10 2.674±1.18 0.111±0.00 N/A 2.532±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000015015 ENSDART00000141835 N/A N/A N/A 18.963±6.46 N/A N/A 6.737±1.52 4.493±0.91 0.261±0.00 N/A 5.014±0.00 N/A N/A N/A
ENSDARG00000026070 ENSDART00000030674 N/A N/A N/A N/A N/A N/A 4.357±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000134714 N/A N/A N/A N/A N/A N/A N/A N/A 1.066±0.00 N/A N/A N/A N/A N/A
ENSDART00000147886 N/A N/A N/A 3.856±1.16 N/A N/A 9.068±2.48 22.636±2.83 1.571±0.00 N/A 3.869±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000085117 ENST00000227155 18.809±0.00 25.696±0.00 N/A 17.503±0.00 9.416±8.36 6.976±0.00 6.691±0.00 11.403±7.98 13.985±0.00 32.455±31.13 11.717±0.00 8.673±8.52 22.608±1.63 6.078±4.48
ENST00000342935 N/A N/A 0.323±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.745±0.00 N/A N/A
ENST00000524704 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.775±0.00 N/A 3.418±0.00 N/A N/A
ENST00000524750 N/A N/A N/A N/A N/A N/A 0.357±0.00 N/A N/A N/A N/A 11.129±0.43 40.059±0.70 1.940±0.00
ENST00000525210 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000525813 N/A N/A N/A N/A 1.262±0.00 N/A N/A N/A 1.116±0.00 N/A N/A N/A N/A N/A
ENST00000525898 N/A N/A N/A N/A N/A N/A 2.282±0.00 N/A N/A N/A N/A 4.674±0.00 N/A N/A
ENST00000526958 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000527737 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000529277 15.930±0.00 N/A N/A N/A N/A N/A N/A 21.746±0.00 7.006±4.91 N/A N/A N/A N/A N/A
ENST00000529853 N/A N/A N/A N/A N/A N/A 0.518±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000530601 N/A N/A N/A N/A 1.903±0.00 N/A N/A N/A N/A N/A 4.144±0.00 N/A N/A N/A
ENST00000530931 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 10.595±3.13 32.211±7.07 1.441±0.00
ENST00000532544 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000157570 ENST00000340160 N/A 15.332±0.00 N/A 2.328±0.00 1.305±0.00 16.214±0.00 8.344±7.01 4.047±0.00 1.787±0.00 6.733±0.00 N/A 10.839±8.03 17.741±2.80 N/A
ENST00000517621 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000518429 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519051 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520245 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520278 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520358 N/A N/A 0.574±0.00 N/A N/A 1.280±0.00 N/A 1.884±0.00 N/A N/A N/A N/A N/A 1.091±0.00
ENST00000520837 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520999 N/A N/A N/A N/A N/A N/A 5.897±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000521990 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000533080 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000533202 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000533786 N/A N/A 3.568±0.00 N/A N/A N/A N/A N/A 6.572±0.00 N/A N/A N/A N/A N/A
ENSG00000175274 ENST00000308212 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.753±0.00 14.709±0.00 1.441±0.00
ENST00000354556 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.664±0.00 N/A N/A N/A
ENST00000395648 76.427±0.00 38.277±0.00 N/A 9.625±0.00 21.040±0.00 35.387±0.00 13.198±0.00 11.677±0.00 3.630±0.00 29.302±0.00 5.677±0.00 6.403±0.00 14.062±0.00 7.976±6.61
ENST00000524774 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000525138 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000525145 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000525667 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000525680 N/A N/A 1.022±0.00 N/A N/A 1.882±0.00 N/A N/A N/A 1.426±0.00 N/A N/A N/A N/A
ENST00000525683 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000527685 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000528290 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000528473 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000530035 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000531130 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000531928 N/A N/A N/A N/A N/A 4.411±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000532253 N/A N/A 0.696±0.00 N/A N/A N/A N/A 1.382±0.00 2.010±0.00 N/A N/A 7.137±5.50 20.288±0.00 N/A
ENST00000532921 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000533443 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000533937 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000533940 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.104±0.00
ENST00000533955 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000616990 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 24.230±0.00 N/A N/A
ENSG00000244267 ENST00000468193 0.051±0.00 0.618±0.00 N/A 0.221±0.00 N/A N/A N/A N/A N/A N/A N/A 0.226±0.10 N/A N/A
ENSG00000255032 ENST00000530039 N/A 0.049±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000255079 ENST00000532748 0.056±0.00 0.019±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.060±0.00 N/A N/A
ENSG00000255092 ENST00000532524 0.089±0.00 0.465±0.00 N/A 0.069±0.00 N/A N/A 0.115±0.00 0.062±0.00 N/A 0.028±0.00 N/A N/A 0.082±0.00 N/A
ENSG00000275725 ENST00000616889 N/A N/A N/A N/A 6.879±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.375±0.00

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