C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Region Summary |
| CIL_0002V8_0001 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSG00000075624-ENSG00000075618 | CGP | 9606 | 7:5527151-5606655  |
|
| Gene | Transcript | Position | Biotype | |
ENSG00000075618  (FSCN1)fascin actin-bundling protein 1 |
ENST00000382361 (FSCN1-001)
|
5592823-5606655 | protein_coding | |
|
ENST00000405801 (FSCN1-005)
|
5594686-5603998 | protein_coding | ||
|
ENST00000444748 (FSCN1-003)
|
5593848-5603983 | protein_coding | ||
|
ENST00000447103 (FSCN1-004)
|
5594547-5603946 | protein_coding | ||
|
ENST00000473330 (FSCN1-002)
|
5602872-5606654 | retained_intron | ||
|
ENSG00000075624 (ACTB) actin, beta |
ENST00000331789 (ACTB-001)
|
5527151-5530709 | protein_coding | |
|
ENST00000414620 (ACTB-010)
|
5529282-5562790 | protein_coding | ||
|
ENST00000417101 (ACTB-012)
|
5529235-5529982 | protein_coding | ||
|
ENST00000425660 (ACTB-002)
|
5527156-5530601 | nonsense_mediated_decay | ||
|
ENST00000432588 (ACTB-008)
|
5528592-5563784 | protein_coding | ||
|
ENST00000443528 (ACTB-009)
|
5529216-5562828 | protein_coding | ||
|
ENST00000462494 (ACTB-003)
|
5527156-5530601 | retained_intron | ||
|
ENST00000464611 (ACTB-013)
|
5527151-5528098 | processed_transcript | ||
|
ENST00000473257 (ACTB-011)
|
5528150-5530604 | processed_transcript | ||
|
ENST00000477812 (ACTB-007)
|
5528470-5530590 | retained_intron | ||
|
ENST00000480301 (ACTB-006)
|
5529067-5530583 | retained_intron | ||
|
ENST00000484841 (ACTB-005)
|
5528111-5530602 | retained_intron | ||
|
ENST00000493945 (ACTB-004)
|
5527741-5529663 | retained_intron | ||
|
ENSG00000228974 (AC006483.5) |
ENST00000487308 (AC006483.5-001)
|
5560743-5561055 | processed_pseudogene | |
|
ENSG00000272719 (CTB-161C1.1) |
ENST00000609813 (CTB-161C1.1-001)
|
5556731-5557245 | antisense | |
| CIL_0002V8_0002 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSMUSG00000029580-ENSMUSG00000029581 | CGP | 10090 | 5:142903115-142973185 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSMUSG00000029580 (Actb) actin, beta |
ENSMUST00000100497 (Actb-001)
|
142903115-142906754 | protein_coding | |
|
ENSMUST00000106216 (Actb-006)
|
142904705-142905937 | protein_coding | ||
|
ENSMUST00000163829 (Actb-004)
|
142904672-142906722 | protein_coding | ||
|
ENSMUST00000164765 (Actb-005)
|
142904873-142906694 | retained_intron | ||
|
ENSMUST00000165629 (Actb-008)
|
142904766-142906672 | retained_intron | ||
|
ENSMUST00000167386 (Actb-003)
|
142904395-142906725 | processed_transcript | ||
|
ENSMUST00000167721 (Actb-002)
|
142903501-142906702 | protein_coding | ||
|
ENSMUST00000171419 (Actb-007)
|
142904351-142905821 | protein_coding | ||
|
ENSMUSG00000029581 (Fscn1) fascin homolog 1, actin bundling protein (Strongylocentrotus purpuratus) |
ENSMUST00000031565 (Fscn1-001)
|
142960343-142973185 | protein_coding | |
|
ENSMUST00000129306 (Fscn1-002)
|
142960843-142972170 | protein_coding | ||
|
ENSMUST00000135293 (Fscn1-006)
|
142970085-142971989 | retained_intron | ||
|
ENSMUST00000137552 (Fscn1-005)
|
142963250-142971953 | protein_coding | ||
|
ENSMUST00000139131 (Fscn1-004)
|
142964533-142970674 | protein_coding | ||
|
ENSMUST00000150622 (Fscn1-003)
|
142962953-142970552 | protein_coding | ||
Expression Patterns
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