C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002VY_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000104921-ENSG00000182566 CGP 9606 19:7688758-7733906
GeneTranscriptPositionBiotype
ENSG00000104921 (FCER2)
Fc fragment of IgE, low affinity II, receptor for (CD23) 		ENST00000346664 (FCER2-001) 7688776-7702146 protein_coding
ENST00000360067 (FCER2-201) 7688758-7699479 protein_coding
ENST00000593418 (FCER2-007) 7690487-7700084 protein_coding
ENST00000597312 (FCER2-003) 7688774-7700083 retained_intron
ENST00000597921 (FCER2-002) 7688781-7702111 protein_coding
ENST00000597934 (FCER2-005) 7688944-7702131 retained_intron
ENST00000598803 (FCER2-004) 7688782-7702093 retained_intron
ENSG00000182566 (CLEC4G)
C-type lectin domain family 4, member G 		ENST00000328853 (CLEC4G-001) 7728957-7732171 protein_coding
ENST00000598081 (CLEC4G-003) 7731039-7732205 processed_transcript
ENST00000599020 (CLEC4G-002) 7730821-7733906 protein_coding
ENST00000620128 (CLEC4G-201) 7728958-7732092 protein_coding
CIL_0002VY_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000005540-ENSMUSG00000074491 CGP 10090 8:3681737-3720651
GeneTranscriptPositionBiotype
ENSMUSG00000005540 (Fcer2a)
Fc receptor, IgE, low affinity II, alpha polypeptide 		ENSMUST00000005678 (Fcer2a-201) 3681737-3694174 protein_coding
ENSMUSG00000089956 (Gm16553)
predicted gene 16553 		ENSMUST00000160490 (Gm16553-001) 3709804-3739044 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002VY_0001ENSG00000104921ENST00000346664ENST00000360067ENST00000593418ENST00000597312ENST00000597921ENST00000597934ENST00000598803ENSG00000182566ENST00000328853ENST00000598081ENST00000599020ENST00000620128CIL_0002VY_0002ENSMUSG00000005540ENSMUST00000005678ENSMUSG00000089956ENSMUST00000160490
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002VY_0001ENSG00000104921ENST00000346664ENST00000360067ENST00000593418ENST00000597312ENST00000597921ENST00000597934ENST00000598803ENSG00000182566ENST00000328853ENST00000598081ENST00000620128CIL_0002VY_0002ENSMUSG00000005540ENSMUST00000005678ENSMUSG00000089956ENSMUST00000160490
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000104921 ENST00000346664 N/A N/A N/A N/A N/A 0.496±0.00 N/A N/A N/A 0.350±0.09 N/A N/A N/A N/A
ENST00000360067 0.242±0.00 N/A N/A N/A 0.453±0.18 0.063±0.00 0.760±0.61 N/A N/A N/A N/A 0.189±0.01 0.655±0.00 0.260±0.06
ENST00000593418 N/A N/A N/A N/A N/A N/A N/A N/A 0.388±0.00 0.760±0.00 N/A N/A N/A N/A
ENST00000597312 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.423±0.00
ENST00000597921 N/A 21.993±0.00 N/A N/A 0.117±0.00 N/A N/A N/A N/A N/A N/A 0.127±0.09 0.229±0.02 N/A
ENST00000597934 N/A N/A N/A 0.048±0.00 N/A N/A N/A 0.069±0.00 0.212±0.00 N/A N/A N/A 0.268±0.00 N/A
ENST00000598803 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.070±0.00 N/A N/A
ENSG00000182566 ENST00000328853 1.986±0.00 19.478±0.00 N/A N/A 0.649±0.00 N/A 1.165±0.00 20.934±0.00 N/A 0.627±0.00 N/A N/A N/A 0.238±0.00
ENST00000598081 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.137±0.00
ENST00000599020 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000620128 2.637±0.00 118.415±0.00 N/A 0.761±0.19 N/A 0.172±0.00 0.875±0.00 0.805±0.00 38.244±37.88 0.324±0.00 N/A 0.423±0.22 1.577±0.52 0.555±0.17
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000005540 ENSMUST00000005678 0.095±0.00 0.126±0.04 0.049±0.00 0.295±0.21 6.192±1.81 0.544±0.22 0.076±0.02 0.405±0.29 0.117±0.10 1.121±0.67 0.566±1.14 0.102±0.04 0.100±0.05 0.108±0.06
ENSMUSG00000089956 ENSMUST00000160490 0.169±0.04 N/A 0.121±0.00 N/A 1.376±0.21 0.131±0.06 0.078±0.00 0.053±0.02 N/A 0.260±0.08 N/A 0.290±0.04 0.109±0.00 N/A

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