C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0002XG_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000074363-ENSDARG00000013491 CGP 7955 13:36548014-36586300
GeneTranscriptPositionBiotype
ENSDARG00000013491 (map3k9)
mitogen-activated protein kinase kinase kinase 9
ENSDART00000057185 (map3k9-201) 36561633-36586064 protein_coding
ENSDART00000146522 (map3k9-001) 36566238-36586300 protein_coding
ENSDARG00000074363 (TTC9)
tetratricopeptide repeat domain 9
ENSDART00000140301 (TTC9-001) 36548014-36555171 protein_coding
CIL_0002XG_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000133985-ENSG00000006432 CGP 9606 14:70641787-70809534
GeneTranscriptPositionBiotype
ENSG00000006432 (MAP3K9)
mitogen-activated protein kinase kinase kinase 9
ENST00000381250 (MAP3K9-003) 70729936-70809506 protein_coding
ENST00000553414 (MAP3K9-005) 70729666-70783440 protein_coding
ENST00000554024 (MAP3K9-006) 70749553-70752956 retained_intron
ENST00000554146 (MAP3K9-004) 70730135-70783445 protein_coding
ENST00000554752 (MAP3K9-001) 70722526-70809171 protein_coding
ENST00000555993 (MAP3K9-002) 70729651-70809534 protein_coding
ENST00000611979 (MAP3K9-201) 70722526-70765472 protein_coding
ENSG00000133985 (TTC9)
tetratricopeptide repeat domain 9
ENST00000256367 (TTC9-001) 70641787-70675360 protein_coding
ENSG00000258689 (LINC01269)
long intergenic non-protein coding RNA 1269
ENST00000553682 (LINC01269-001) 70698698-70712153 lincRNA
CIL_0002XG_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000042734-ENSMUSG00000042724 CGP 10090 12:81631369-81781170
GeneTranscriptPositionBiotype
ENSMUSG00000042724 (Map3k9)
mitogen-activated protein kinase kinase kinase 9
ENSMUST00000035987 (Map3k9-201) 81714950-81781170 protein_coding
ENSMUSG00000042734 (Ttc9)
tetratricopeptide repeat domain 9
ENSMUST00000036116 (Ttc9-201) 81631369-81664941 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002XG_0001ENSDARG00000013491ENSDART00000057185ENSDART00000146522ENSDARG00000074363ENSDART00000140301CIL_0002XG_0002ENSG00000006432ENST00000381250ENST00000553414ENST00000554024ENST00000554146ENST00000554752ENST00000555993ENST00000611979ENSG00000133985ENST00000256367ENSG00000258689ENST00000553682CIL_0002XG_0003ENSMUSG00000042724ENSMUST00000035987ENSMUSG00000042734ENSMUST00000036116
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002XG_0001ENSDARG00000013491ENSDART00000057185ENSDART00000146522ENSDARG00000074363ENSDART00000140301CIL_0002XG_0002ENSG00000006432ENST00000381250ENST00000554024ENST00000554752ENST00000555993ENST00000611979ENSG00000133985ENST00000256367ENSG00000258689ENST00000553682CIL_0002XG_0003ENSMUSG00000042724ENSMUST00000035987ENSMUSG00000042734ENSMUST00000036116
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000013491 ENSDART00000057185 N/A N/A N/A N/A N/A N/A 0.023±0.01 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000146522 N/A N/A N/A N/A N/A N/A N/A 0.100±0.00 0.016±0.00 N/A N/A N/A N/A N/A
ENSDARG00000074363 ENSDART00000140301 N/A N/A N/A 17.626±13.70 N/A N/A 0.166±0.05 0.257±0.11 N/A N/A 1.337±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000006432 ENST00000381250 N/A N/A N/A N/A N/A N/A 0.055±0.00 N/A 0.084±0.00 N/A N/A N/A 0.090±0.00 N/A
ENST00000553414 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554024 N/A N/A N/A N/A 0.759±0.00 N/A N/A N/A N/A 1.313±0.00 0.863±0.00 1.793±0.00 N/A N/A
ENST00000554146 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554752 0.012±0.00 0.299±0.00 0.353±0.00 3.315±0.65 0.129±0.02 0.181±0.00 0.173±0.14 0.195±0.00 0.281±0.00 0.362±0.04 0.171±0.01 0.509±0.35 0.064±0.03 1.383±0.47
ENST00000555993 N/A N/A N/A N/A 0.186±0.00 N/A N/A N/A N/A 0.728±0.00 0.418±0.00 N/A 0.133±0.00 N/A
ENST00000611979 N/A N/A N/A N/A N/A N/A N/A 0.913±0.00 0.085±0.04 0.404±0.00 N/A 0.154±0.06 0.183±0.12 0.998±0.34
ENSG00000133985 ENST00000256367 0.451±0.00 3.831±0.00 0.201±0.00 3.709±1.35 0.597±0.36 0.264±0.11 0.337±0.23 0.572±0.55 0.149±0.07 1.352±0.54 2.052±0.00 1.607±1.65 4.915±2.29 0.716±0.06
ENSG00000258689 ENST00000553682 0.285±0.00 0.572±0.00 N/A 0.397±0.00 0.156±0.00 0.170±0.00 0.163±0.00 0.485±0.00 0.080±0.00 0.342±0.00 N/A 0.137±0.03 0.080±0.00 0.275±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000042724 ENSMUST00000035987 0.158±0.10 0.688±0.18 1.177±0.01 6.697±3.05 0.303±0.01 1.864±0.24 0.073±0.03 0.874±0.37 0.055±0.06 2.080±0.69 0.040±0.02 0.480±0.12 0.654±0.66 1.022±0.35
ENSMUSG00000042734 ENSMUST00000036116 1.319±0.69 0.553±0.09 2.472±0.28 2.929±0.00 0.992±0.36 0.632±0.13 0.689±0.22 0.390±0.11 0.057±0.06 6.725±0.41 2.412±0.51 3.548±0.57 2.576±3.09 10.893±3.84

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