C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002XX_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000114248-ENSG00000187033 CGP 9606 3:169839179-169939175
GeneTranscriptPositionBiotype
ENSG00000114248 (LRRC31)
leucine rich repeat containing 31 		ENST00000264676 (LRRC31-002) 169839241-169869930 protein_coding
ENST00000316428 (LRRC31-001) 169839179-169869865 protein_coding
ENST00000397805 (LRRC31-003) 169853223-169869874 processed_transcript
ENST00000523069 (LRRC31-004) 169839971-169869833 protein_coding
ENSG00000187033 (SAMD7)
sterile alpha motif domain containing 7 		ENST00000335556 (SAMD7-002) 169911572-169939175 protein_coding
ENST00000428432 (SAMD7-001) 169911572-169939175 protein_coding
ENST00000487910 (SAMD7-003) 169915411-169938587 nonsense_mediated_decay
ENSG00000240128 (KRT18P43)
keratin 18 pseudogene 43 		ENST00000469825 (KRT18P43-001) 169902980-169904260 processed_pseudogene
ENSG00000244039 (RP11-379K17.2)
 ENST00000493762 (RP11-379K17.2-001) 169931998-169933229 processed_pseudogene
CIL_0002XX_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000074653-ENSMUSG00000051860 CGP 10090 3:30679058-30767174
GeneTranscriptPositionBiotype
ENSMUSG00000051860 (Samd7)
sterile alpha motif domain containing 7 		ENSMUST00000108262 (Samd7-001) 30746340-30767174 protein_coding
ENSMUST00000172593 (Samd7-003) 30751045-30765495 nonsense_mediated_decay
ENSMUST00000174395 (Samd7-002) 30746293-30767166 nonsense_mediated_decay
ENSMUSG00000074653 (Lrrc31)
leucine rich repeat containing 31 		ENSMUST00000108263 (Lrrc31-001) 30682680-30699843 protein_coding
ENSMUST00000126658 (Lrrc31-003) 30679058-30691300 protein_coding
ENSMUST00000130731 (Lrrc31-002) 30698122-30699810 processed_transcript
ENSMUSG00000086189 (Gm15462)
predicted gene 15462 		ENSMUST00000133653 (Gm15462-001) 30686085-30692366 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002XX_0001ENSG00000114248ENST00000264676ENST00000316428ENST00000397805ENST00000523069ENSG00000187033ENST00000335556ENST00000428432ENST00000487910ENSG00000240128ENST00000469825ENSG00000244039ENST00000493762CIL_0002XX_0002ENSMUSG00000051860ENSMUST00000108262ENSMUST00000172593ENSMUST00000174395ENSMUSG00000074653ENSMUST00000108263ENSMUST00000126658ENSMUST00000130731ENSMUSG00000086189ENSMUST00000133653
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002XX_0001ENSG00000114248ENST00000264676ENST00000316428ENST00000397805ENST00000523069ENSG00000187033ENST00000335556ENST00000487910ENSG00000240128ENST00000469825ENSG00000244039ENST00000493762CIL_0002XX_0002ENSMUSG00000051860ENSMUST00000108262ENSMUST00000172593ENSMUST00000174395ENSMUSG00000074653ENSMUST00000108263ENSMUST00000126658ENSMUST00000130731ENSMUSG00000086189ENSMUST00000133653
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000114248 ENST00000264676 N/A N/A N/A N/A N/A 0.180±0.00 N/A 0.071±0.03 N/A N/A N/A N/A N/A 0.052±0.00
ENST00000316428 N/A N/A N/A N/A 1.630±0.00 N/A N/A N/A 0.039±0.00 0.369±0.00 N/A 0.563±0.12 N/A N/A
ENST00000397805 0.007±0.00 N/A N/A N/A 0.639±0.62 N/A N/A N/A N/A N/A N/A 0.007±0.00 N/A 0.033±0.00
ENST00000523069 N/A N/A 0.195±0.00 N/A 1.659±0.00 1.811±0.00 0.045±0.00 0.046±0.00 0.040±0.00 N/A N/A 0.750±0.45 0.014±0.00 0.010±0.00
ENSG00000187033 ENST00000335556 N/A 0.023±0.00 N/A N/A N/A N/A 0.026±0.00 N/A N/A N/A N/A 0.281±0.00 N/A 0.052±0.00
ENST00000428432 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487910 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.471±0.00 N/A 0.076±0.00
ENSG00000240128 ENST00000469825 N/A N/A N/A N/A 0.032±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000244039 ENST00000493762 N/A N/A N/A N/A 0.013±0.00 N/A N/A N/A N/A 0.012±0.00 N/A 0.085±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000051860 ENSMUST00000108262 N/A N/A N/A 0.010±0.01 N/A N/A N/A N/A N/A N/A N/A 0.099±0.02 0.005±0.00 N/A
ENSMUST00000172593 N/A N/A N/A 0.005±0.00 0.058±0.00 N/A N/A 0.026±0.00 N/A N/A N/A 0.068±0.00 N/A 0.581±0.00
ENSMUST00000174395 N/A 0.057±0.04 N/A 0.020±0.01 N/A N/A 0.009±0.00 0.015±0.01 0.039±0.02 0.012±0.00 0.017±0.00 0.104±0.07 0.015±0.01 1.241±0.44
ENSMUSG00000074653 ENSMUST00000108263 0.631±0.00 N/A N/A N/A N/A 0.751±0.24 N/A 0.454±0.05 0.020±0.00 N/A N/A 0.410±0.14 N/A N/A
ENSMUST00000126658 1.335±0.04 N/A 0.060±0.00 N/A N/A 1.699±0.33 0.093±0.00 1.330±0.48 N/A 0.248±0.06 N/A 1.634±0.85 N/A N/A
ENSMUST00000130731 N/A N/A N/A N/A N/A N/A N/A 1.824±0.00 N/A N/A N/A 0.706±0.00 0.068±0.00 N/A
ENSMUSG00000086189 ENSMUST00000133653 0.424±0.36 0.069±0.04 0.037±0.01 0.140±0.12 0.264±0.06 0.576±0.14 0.195±0.04 0.507±0.06 0.053±0.03 0.295±0.12 0.008±0.00 0.388±0.16 0.028±0.01 0.283±0.13

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