C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000326_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000079823-ENSDARG00000094892 CGP 7955 8:17682894-17693094
GeneTranscriptPositionBiotype
ENSDARG00000079823 (MRPS36)
mitochondrial ribosomal protein S36 		ENSDART00000113821 (MRPS36-201) 17682899-17685963 protein_coding
ENSDART00000135042 (MRPS36-001) 17682894-17687219 protein_coding
ENSDART00000143920 (MRPS36-002) 17682894-17687230 protein_coding
ENSDARG00000094892 (cenph)
centromere protein H 		ENSDART00000134665 (cenph-001) 17687276-17693094 protein_coding
CIL_000326_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000061474-ENSMUSG00000045273 CGP 10090 13:100735955-100775899
GeneTranscriptPositionBiotype
ENSMUSG00000045273 (Cenph)
centromere protein H 		ENSMUST00000075550 (Cenph-001) 100759674-100775899 protein_coding
ENSMUST00000136694 (Cenph-002) 100772193-100775783 retained_intron
ENSMUSG00000061474 (Mrps36)
mitochondrial ribosomal protein S36 		ENSMUST00000076037 (Mrps36-003) 100736152-100744588 processed_transcript
ENSMUST00000078573 (Mrps36-002) 100736077-100744657 protein_coding
ENSMUST00000109333 (Mrps36-001) 100735955-100744659 protein_coding
ENSMUST00000125206 (Mrps36-005) 100736180-100744114 processed_transcript
ENSMUST00000132955 (Mrps36-004) 100736129-100744131 processed_transcript
ENSMUST00000150113 (Mrps36-006) 100743408-100744113 processed_transcript
ENSMUSG00000085340 (Gm16335)
predicted gene 16335 		ENSMUST00000077495 (Gm16335-001) 100770464-100770772 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000326_0001ENSDARG00000079823ENSDART00000113821ENSDART00000135042ENSDART00000143920ENSDARG00000094892ENSDART00000134665CIL_000326_0002ENSMUSG00000045273ENSMUST00000075550ENSMUST00000136694ENSMUSG00000061474ENSMUST00000076037ENSMUST00000078573ENSMUST00000109333ENSMUST00000125206ENSMUST00000132955ENSMUST00000150113ENSMUSG00000085340ENSMUST00000077495
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000326_0001ENSDARG00000079823ENSDART00000113821ENSDART00000135042ENSDART00000143920ENSDARG00000094892ENSDART00000134665CIL_000326_0002ENSMUSG00000045273ENSMUST00000075550ENSMUST00000136694ENSMUSG00000061474ENSMUST00000076037ENSMUST00000078573ENSMUST00000109333ENSMUST00000125206ENSMUST00000132955ENSMUSG00000085340ENSMUST00000077495
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000079823 ENSDART00000113821 N/A N/A N/A 40.969±23.68 N/A N/A 24.976±14.88 6.916±1.19 3.033±0.00 N/A 53.126±0.00 N/A N/A N/A
ENSDART00000135042 N/A N/A N/A 6.070±4.51 N/A N/A 10.612±1.89 N/A 1.582±0.00 N/A 21.242±0.00 N/A N/A N/A
ENSDART00000143920 N/A N/A N/A 13.774±1.49 N/A N/A 25.630±4.33 5.359±0.00 1.886±0.00 N/A N/A N/A N/A N/A
ENSDARG00000094892 ENSDART00000134665 N/A N/A N/A 0.842±0.50 N/A N/A 0.343±0.14 3.197±0.00 N/A N/A 0.161±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000045273 ENSMUST00000075550 0.493±0.36 0.522±0.28 0.504±0.23 3.106±0.31 0.314±0.18 0.937±0.41 0.048±0.02 0.179±0.06 13.574±12.94 0.218±0.12 0.026±0.00 1.477±1.97 11.922±11.79 3.154±1.39
ENSMUST00000136694 0.495±0.18 N/A N/A N/A 0.208±0.10 N/A 0.060±0.00 N/A N/A 0.106±0.02 0.092±0.00 0.635±0.46 N/A N/A
ENSMUSG00000061474 ENSMUST00000076037 N/A N/A N/A 1.208±0.00 N/A N/A N/A N/A N/A N/A N/A 1.427±0.00 N/A 12.239±0.47
ENSMUST00000078573 9.377±2.26 2.597±0.39 5.020±0.10 3.182±0.61 4.903±2.37 4.153±1.03 31.609±5.57 19.330±2.35 4.339±2.83 5.519±0.32 7.282±0.57 2.803±1.40 7.342±1.35 36.346±17.28
ENSMUST00000109333 15.322±3.06 13.153±1.68 25.272±0.83 10.842±6.89 13.132±3.39 21.645±3.37 42.166±5.92 38.522±4.49 17.830±10.92 10.960±1.24 29.903±1.33 7.269±4.29 21.843±15.67 23.078±11.19
ENSMUST00000125206 N/A N/A N/A 0.316±0.00 2.663±0.00 N/A 7.569±0.00 N/A N/A N/A N/A 0.588±0.00 N/A N/A
ENSMUST00000132955 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.150±0.00
ENSMUST00000150113 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000085340 ENSMUST00000077495 N/A N/A 0.215±0.15 N/A N/A 0.990±0.00 N/A N/A 0.377±0.10 N/A 0.457±0.24 0.511±0.00 0.277±0.13 N/A

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