C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000344_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000058994-ENSDARG00000063596 CGP 7955 15:1729632-1760343
GeneTranscriptPositionBiotype
ENSDARG00000058994 (stx1a)
syntaxin 1A (brain) 		ENSDART00000081947 (stx1a-201) 1729632-1742169 protein_coding
ENSDART00000156225 (stx1a-001) 1729659-1742169 protein_coding
ENSDARG00000063596 (wbscr22)
Williams Beuren syndrome chromosome region 22 		ENSDART00000093074 (wbscr22-001) 1745049-1760343 protein_coding
ENSDART00000149980 (wbscr22-002) 1751347-1760304 protein_coding
CIL_000344_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000007207-ENSMUSG00000005378 CGP 10090 5:135023482-135064959
GeneTranscriptPositionBiotype
ENSMUSG00000007207 (Stx1a)
syntaxin 1A (brain) 		ENSMUST00000005509 (Stx1a-001) 135023482-135051100 protein_coding
ENSMUST00000133812 (Stx1a-005) 135037511-135048830 processed_transcript
ENSMUST00000144198 (Stx1a-004) 135041266-135048939 processed_transcript
ENSMUST00000150838 (Stx1a-003) 135023560-135051100 nonsense_mediated_decay
ENSMUST00000156626 (Stx1a-002) 135041060-135051099 retained_intron
ENSMUSG00000061118 (Dnajc30)
DnaJ (Hsp40) homolog, subfamily C, member 30 		ENSMUST00000071263 (Dnajc30-001) 135064202-135065862 protein_coding
ENSMUSG00000088008 (Gm25492)
predicted gene, 25492 		ENSMUST00000157383 (Gm25492-201) 135053988-135054116 snoRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000344_0001ENSDARG00000058994ENSDART00000081947ENSDART00000156225ENSDARG00000063596ENSDART00000093074ENSDART00000149980CIL_000344_0002ENSMUSG00000007207ENSMUST00000005509ENSMUST00000133812ENSMUST00000144198ENSMUST00000150838ENSMUST00000156626ENSMUSG00000061118ENSMUST00000071263ENSMUSG00000088008ENSMUST00000157383
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000344_0001ENSDARG00000058994ENSDART00000081947ENSDART00000156225ENSDARG00000063596ENSDART00000093074CIL_000344_0002ENSMUSG00000007207ENSMUST00000005509ENSMUST00000133812ENSMUST00000144198ENSMUST00000150838ENSMUST00000156626ENSMUSG00000061118ENSMUST00000071263ENSMUSG00000088008ENSMUST00000157383
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000058994 ENSDART00000081947 N/A N/A N/A 0.059±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000156225 N/A N/A N/A 0.127±0.07 N/A N/A 0.131±0.00 2.812±0.00 0.786±0.00 N/A 0.080±0.00 N/A N/A N/A
ENSDARG00000063596 ENSDART00000093074 N/A N/A N/A 4.910±0.78 N/A N/A 8.113±0.92 3.002±3.55 6.187±0.00 N/A 4.323±0.00 N/A N/A N/A
ENSDART00000149980 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000007207 ENSMUST00000005509 N/A 2.307±0.00 N/A 45.292±23.52 N/A 0.988±0.00 0.254±0.00 0.282±0.06 0.067±0.00 N/A 0.108±0.00 N/A N/A N/A
ENSMUST00000133812 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 11.550±0.00 N/A N/A
ENSMUST00000144198 N/A N/A N/A N/A N/A 2.672±0.00 N/A N/A N/A N/A 0.202±0.00 N/A N/A N/A
ENSMUST00000150838 3.490±1.20 3.747±0.54 4.052±0.54 5.571±0.00 2.328±0.73 1.417±0.55 0.842±0.31 1.010±0.35 1.632±0.83 2.605±0.56 0.373±0.16 6.831±2.30 1.621±1.03 1.803±0.76
ENSMUST00000156626 N/A 5.444±1.07 N/A N/A N/A 0.554±0.05 N/A N/A 0.362±0.11 N/A 0.320±0.05 8.618±4.35 0.273±0.00 0.632±0.06
ENSMUSG00000061118 ENSMUST00000071263 5.954±0.63 39.064±15.82 12.443±0.00 12.784±5.30 19.904±13.24 15.205±4.42 8.369±2.32 15.209±6.73 13.817±3.72 13.419±5.16 7.550±2.07 14.057±7.07 7.236±2.57 5.660±4.58
ENSMUSG00000088008 ENSMUST00000157383 1220.868±628.85 924.760±172.95 43.972±0.00 85.792±73.40 1382.783±621.91 N/A N/A 719.714±0.00 7.809±0.99 485.005±0.00 2.643±0.00 65.241±50.70 31.515±23.67 36.230±0.00

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