C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000346_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000135945-ENSG00000144218 CGP 9606 2:99400475-100142739
GeneTranscriptPositionBiotype
ENSG00000135945 (REV1)
REV1, polymerase (DNA directed) 		ENST00000258428 (REV1-001) 99400475-99490035 protein_coding
ENST00000393445 (REV1-002) 99400475-99489973 protein_coding
ENST00000413697 (REV1-003) 99400950-99490035 nonsense_mediated_decay
ENST00000438366 (REV1-012) 99405928-99410850 nonsense_mediated_decay
ENST00000450415 (REV1-007) 99424781-99438727 protein_coding
ENST00000465086 (REV1-016) 99402530-99403430 retained_intron
ENST00000465835 (REV1-005) 99403056-99451480 processed_transcript
ENST00000472000 (REV1-014) 99405933-99406928 retained_intron
ENST00000473819 (REV1-004) 99438574-99462788 retained_intron
ENST00000477121 (REV1-013) 99406084-99408403 retained_intron
ENST00000481719 (REV1-010) 99418832-99424634 retained_intron
ENST00000482595 (REV1-011) 99402259-99412953 processed_transcript
ENST00000482887 (REV1-006) 99435837-99438777 processed_transcript
ENST00000485487 (REV1-015) 99403040-99406353 retained_intron
ENST00000486117 (REV1-009) 99431801-99438817 processed_transcript
ENST00000491752 (REV1-008) 99435475-99438680 retained_intron
ENSG00000144218 (AFF3)
AF4/FMR2 family, member 3 		ENST00000317233 (AFF3-201) 99547256-100142575 protein_coding
ENST00000409236 (AFF3-001) 99545419-100104716 protein_coding
ENST00000409579 (AFF3-002) 99551121-100106128 protein_coding
ENST00000415384 (AFF3-009) 100008899-100106047 protein_coding
ENST00000416492 (AFF3-005) 100007337-100142583 protein_coding
ENST00000423966 (AFF3-003) 100007169-100142575 protein_coding
ENST00000424600 (AFF3-006) 100007293-100105339 protein_coding
ENST00000427118 (AFF3-010) 100104402-100106047 protein_coding
ENST00000430789 (AFF3-012) 99630578-100006845 nonsense_mediated_decay
ENST00000432037 (AFF3-014) 100007152-100104530 protein_coding
ENST00000440445 (AFF3-008) 100007399-100105807 protein_coding
ENST00000441400 (AFF3-007) 100007249-100105427 protein_coding
ENST00000445815 (AFF3-015) 99554393-99578370 protein_coding
ENST00000483600 (AFF3-011) 100109845-100142739 processed_transcript
ENST00000498090 (AFF3-013) 100006149-100007951 retained_intron
ENSG00000158417 (EIF5B)
eukaryotic translation initiation factor 5B 		ENST00000289371 (EIF5B-001) 99337353-99401326 protein_coding
ENST00000470023 (EIF5B-002) 99397047-99399774 retained_intron
ENST00000470868 (EIF5B-003) 99389607-99390690 retained_intron
ENST00000494190 (EIF5B-004) 99394809-99399197 retained_intron
ENST00000617677 (EIF5B-201) 99337371-99400265 protein_coding
ENSG00000222274 (AC018690.1)
 ENST00000410342 (AC018690.1-201) 99520103-99520232 miRNA
ENSG00000273306 (RP11-527J8.1)
 ENST00000608144 (RP11-527J8.1-001) 99405218-99405843 antisense
CIL_000346_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000026082-ENSMUSG00000037138 CGP 10090 1:38052787-38664955
GeneTranscriptPositionBiotype
ENSMUSG00000026082 (Rev1)
REV1 homolog (S. cerevisiae) 		ENSMUST00000027251 (Rev1-201) 38052787-38129662 protein_coding
ENSMUSG00000026083 (Eif5b)
eukaryotic translation initiation factor 5B 		ENSMUST00000027252 (Eif5b-201) 37998010-38055579 protein_coding
ENSMUSG00000037138 (Aff3)
AF4/FMR2 family, member 3 		ENSMUST00000027250 (Aff3-001) 38335431-38664955 protein_coding
ENSMUST00000039827 (Aff3-201) 38177327-38664955 protein_coding
ENSMUST00000095027 (Aff3-002) 38177326-38627185 protein_coding
ENSMUST00000134963 (Aff3-004) 38535159-38664955 nonsense_mediated_decay
ENSMUST00000136641 (Aff3-005) 38181262-38197443 protein_coding
ENSMUST00000142875 (Aff3-003) 38179243-38627201 nonsense_mediated_decay
ENSMUSG00000085280 (Gm16151)
predicted gene 16151 		ENSMUST00000129696 (Gm16151-001) 38307902-38311930 antisense
ENSMUSG00000085391 (Gm16150)
predicted gene 16150 		ENSMUST00000127620 (Gm16150-001) 38235420-38245603 antisense
ENSMUST00000133299 (Gm16150-002) 38239700-38246666 antisense
ENSMUSG00000087131 (Gm16152)
predicted gene 16152 		ENSMUST00000131663 (Gm16152-002) 38388829-38390244 antisense
ENSMUST00000143261 (Gm16152-001) 38384949-38393974 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000346_0001ENSG00000135945ENST00000258428ENST00000393445ENST00000413697ENST00000438366ENST00000450415ENST00000465086ENST00000465835ENST00000472000ENST00000473819ENST00000477121ENST00000481719ENST00000482595ENST00000482887ENST00000485487ENST00000486117ENST00000491752ENSG00000144218ENST00000317233ENST00000409236ENST00000409579ENST00000415384ENST00000416492ENST00000423966ENST00000424600ENST00000427118ENST00000430789ENST00000432037ENST00000440445ENST00000441400ENST00000445815ENST00000483600ENST00000498090ENSG00000158417ENST00000289371ENST00000470023ENST00000470868ENST00000494190ENST00000617677ENSG00000222274ENST00000410342ENSG00000273306ENST00000608144CIL_000346_0002ENSMUSG00000026082ENSMUST00000027251ENSMUSG00000026083ENSMUST00000027252ENSMUSG00000037138ENSMUST00000027250ENSMUST00000039827ENSMUST00000095027ENSMUST00000134963ENSMUST00000136641ENSMUST00000142875ENSMUSG00000085280ENSMUST00000129696ENSMUSG00000085391ENSMUST00000127620ENSMUST00000133299ENSMUSG00000087131ENSMUST00000131663ENSMUST00000143261
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000346_0001ENSG00000135945ENST00000258428ENST00000393445ENST00000413697ENST00000465835ENSG00000144218ENST00000317233ENST00000409236ENST00000409579ENST00000423966ENST00000424600ENST00000432037ENST00000441400ENST00000498090ENSG00000158417ENST00000289371ENST00000617677ENSG00000222274ENST00000410342ENSG00000273306ENST00000608144CIL_000346_0002ENSMUSG00000026082ENSMUST00000027251ENSMUSG00000026083ENSMUST00000027252ENSMUSG00000037138ENSMUST00000027250ENSMUST00000039827ENSMUST00000095027ENSMUST00000136641ENSMUST00000142875ENSMUSG00000085280ENSMUST00000129696ENSMUSG00000085391ENSMUST00000127620ENSMUST00000133299ENSMUSG00000087131ENSMUST00000131663ENSMUST00000143261
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000135945 ENST00000258428 N/A N/A N/A 3.302±0.67 N/A N/A 1.995±0.00 1.709±0.00 N/A 3.414±0.00 N/A 6.539±0.00 2.167±0.00 N/A
ENST00000393445 N/A N/A N/A N/A 3.902±0.00 4.393±0.00 1.306±0.00 N/A 4.165±0.00 3.981±0.62 2.646±0.00 4.144±0.00 N/A N/A
ENST00000413697 N/A N/A 1.766±0.00 N/A N/A N/A N/A N/A N/A 2.411±0.00 N/A 3.739±0.00 N/A N/A
ENST00000438366 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000450415 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465086 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465835 N/A N/A 3.271±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472000 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000473819 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477121 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000481719 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482595 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482887 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485487 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486117 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491752 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000144218 ENST00000317233 0.606±0.00 2.633±0.00 0.420±0.00 3.717±0.39 1.454±0.65 1.438±0.87 0.396±0.30 0.539±0.05 1.752±1.58 1.610±0.32 0.186±0.03 0.810±0.96 1.217±0.01 2.511±0.14
ENST00000409236 0.149±0.00 N/A N/A 0.590±0.00 N/A 0.372±0.22 0.085±0.00 N/A 0.096±0.00 N/A N/A 0.153±0.13 N/A 0.579±0.15
ENST00000409579 N/A N/A 0.172±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000415384 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000416492 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000423966 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.711±0.00 N/A N/A
ENST00000424600 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.685±0.00 N/A N/A N/A
ENST00000427118 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000430789 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000432037 N/A N/A N/A N/A N/A N/A 1.039±0.00 N/A N/A 15.383±0.00 N/A N/A N/A N/A
ENST00000440445 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000441400 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.977±0.71 N/A N/A
ENST00000445815 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483600 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000498090 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.219±0.00 N/A N/A
ENSG00000158417 ENST00000289371 N/A N/A N/A 0.668±0.00 1.348±0.00 N/A N/A 1.006±0.00 1.276±0.00 1.634±0.00 0.805±0.00 7.559±6.11 9.980±0.00 N/A
ENST00000470023 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470868 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494190 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000617677 17.167±0.00 15.833±0.00 1.184±0.00 10.814±0.00 2.032±0.00 1.274±0.00 7.714±7.04 N/A N/A N/A N/A 9.719±5.51 4.223±0.08 N/A
ENSG00000222274 ENST00000410342 N/A N/A N/A N/A N/A 0.066±0.00 N/A N/A N/A 0.349±0.00 N/A N/A N/A N/A
ENSG00000273306 ENST00000608144 0.560±0.00 2.228±0.00 0.268±0.00 0.640±0.11 0.832±0.49 2.071±1.28 0.695±0.25 0.780±0.19 0.521±0.09 0.717±0.00 1.307±0.23 2.420±1.90 0.081±0.01 0.985±0.58
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026082 ENSMUST00000027251 3.368±1.34 2.340±0.82 7.228±0.23 9.785±0.57 2.500±0.56 1.825±0.32 2.357±0.25 2.343±0.77 5.561±3.14 2.299±0.49 5.394±0.58 5.307±2.77 6.111±0.53 9.122±0.36
ENSMUSG00000026083 ENSMUST00000027252 1.986±0.13 2.797±0.50 5.827±2.11 11.226±6.67 1.655±0.39 1.542±0.27 2.846±0.19 2.302±0.36 3.717±1.93 2.644±0.68 5.866±3.06 6.686±10.15 24.397±13.21 12.364±11.39
ENSMUSG00000037138 ENSMUST00000027250 N/A N/A N/A N/A N/A N/A N/A N/A 0.081±0.00 N/A N/A N/A N/A N/A
ENSMUST00000039827 N/A 0.305±0.00 0.367±0.00 2.661±0.00 1.592±0.90 0.367±0.08 N/A N/A 0.086±0.00 1.221±0.24 N/A 2.778±0.85 0.140±0.06 0.206±0.01
ENSMUST00000095027 1.081±0.53 N/A 0.589±0.17 11.809±3.66 2.774±1.97 0.180±0.00 0.443±0.12 0.369±0.23 0.139±0.08 4.998±2.17 0.204±0.18 6.743±2.67 0.282±0.24 0.748±0.34
ENSMUST00000134963 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136641 N/A 1.625±0.19 N/A N/A N/A N/A N/A N/A 0.164±0.00 N/A N/A N/A N/A 2.077±0.68
ENSMUST00000142875 N/A N/A N/A N/A 2.056±0.23 0.345±0.08 N/A N/A 0.075±0.00 2.243±0.00 0.067±0.00 4.321±0.00 N/A 0.455±0.10
ENSMUSG00000085280 ENSMUST00000129696 0.350±0.16 0.156±0.06 0.096±0.06 0.170±0.00 0.168±0.00 N/A 0.137±0.03 N/A 0.088±0.05 0.091±0.04 N/A 0.466±0.25 0.010±0.00 N/A
ENSMUSG00000085391 ENSMUST00000127620 N/A N/A N/A 0.085±0.00 N/A N/A N/A N/A N/A N/A N/A 0.733±0.00 0.034±0.00 N/A
ENSMUST00000133299 0.050±0.00 N/A 0.142±0.11 0.070±0.00 0.158±0.01 N/A 0.073±0.02 N/A 0.056±0.03 0.328±0.16 0.073±0.02 0.438±0.21 0.036±0.04 1.709±0.54
ENSMUSG00000087131 ENSMUST00000131663 0.256±0.09 N/A N/A 0.081±0.06 0.207±0.00 N/A N/A 0.076±0.03 0.083±0.05 0.110±0.04 N/A 0.203±0.10 0.055±0.00 N/A
ENSMUST00000143261 0.134±0.11 0.106±0.04 N/A 0.287±0.00 0.272±0.12 N/A N/A 0.088±0.03 0.031±0.02 0.230±0.09 0.027±0.01 0.158±0.12 0.013±0.00 0.032±0.00

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