C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00037T_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000154258-ENSG00000154262 CGP 9606 17:68974488-69141888
GeneTranscriptPositionBiotype
ENSG00000154258 (ABCA9)
ATP-binding cassette, sub-family A (ABC1), member 9 		ENST00000340001 (ABCA9-001) 68974488-69061064 protein_coding
ENST00000453985 (ABCA9-002) 68974632-69060924 protein_coding
ENST00000460872 (ABCA9-006) 68989925-68992682 retained_intron
ENST00000461623 (ABCA9-004) 69032601-69049357 retained_intron
ENST00000482072 (ABCA9-005) 68986608-68989141 processed_transcript
ENST00000492580 (ABCA9-007) 69011825-69017772 retained_intron
ENST00000495634 (ABCA9-003) 69042915-69060906 protein_coding
ENST00000585714 (ABCA9-008) 69049318-69060949 protein_coding
ENSG00000154262 (ABCA6)
ATP-binding cassette, sub-family A (ABC1), member 6 		ENST00000284425 (ABCA6-001) 69078702-69141874 protein_coding
ENST00000446604 (ABCA6-005) 69078917-69098592 processed_transcript
ENST00000589482 (ABCA6-007) 69085654-69087618 retained_intron
ENST00000589803 (ABCA6-003) 69105491-69117988 retained_intron
ENST00000590311 (ABCA6-004) 69103912-69115442 retained_intron
ENST00000590645 (ABCA6-002) 69135230-69141888 protein_coding
ENST00000592493 (ABCA6-006) 69114780-69115914 processed_transcript
ENSG00000265331 (MIR4524A)
microRNA 4524b 		ENST00000581569 (MIR4524A-201) 69099542-69099656 miRNA
ENSG00000267361 (LOC100421166)
 ENST00000586611 (LOC100421166-001) 69094289-69095499 processed_pseudogene
CIL_00037T_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000041797-ENSMUSG00000044749 CGP 10090 11:110100749-110251776
GeneTranscriptPositionBiotype
ENSMUSG00000041797 (Abca9)
ATP-binding cassette, sub-family A (ABC1), member 9 		ENSMUST00000044850 (Abca9-001) 110100749-110168196 protein_coding
ENSMUST00000126499 (Abca9-002) 110156517-110168055 processed_transcript
ENSMUSG00000044749 (Abca6)
ATP-binding cassette, sub-family A (ABC1), member 6 		ENSMUST00000044003 (Abca6-001) 110176820-110251776 protein_coding
ENSMUST00000150988 (Abca6-002) 110236453-110251776 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00037T_0001ENSG00000154258ENST00000340001ENST00000453985ENST00000460872ENST00000461623ENST00000482072ENST00000492580ENST00000495634ENST00000585714ENSG00000154262ENST00000284425ENST00000446604ENST00000589482ENST00000589803ENST00000590311ENST00000590645ENST00000592493ENSG00000265331ENST00000581569ENSG00000267361ENST00000586611CIL_00037T_0002ENSMUSG00000041797ENSMUST00000044850ENSMUST00000126499ENSMUSG00000044749ENSMUST00000044003ENSMUST00000150988
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00037T_0001ENSG00000154258ENST00000340001ENST00000453985ENST00000495634ENSG00000154262ENST00000284425ENST00000446604ENST00000590311ENST00000590645ENSG00000265331ENST00000581569ENSG00000267361ENST00000586611CIL_00037T_0002ENSMUSG00000041797ENSMUST00000044850ENSMUSG00000044749ENSMUST00000044003ENSMUST00000150988
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000154258 ENST00000340001 3.287±0.00 0.282±0.00 0.411±0.00 0.216±0.05 1.917±0.27 2.394±1.05 1.675±0.51 N/A 1.382±1.02 0.493±0.01 0.584±0.45 1.999±0.20 0.060±0.00 0.860±0.38
ENST00000453985 5.647±0.00 0.633±0.00 N/A 0.246±0.12 2.478±0.00 9.094±0.00 2.218±0.57 0.775±0.49 1.362±1.02 1.323±0.00 1.141±0.00 1.002±0.68 0.029±0.00 1.754±0.00
ENST00000460872 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000461623 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482072 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492580 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495634 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.424±0.00 0.131±0.00 N/A
ENST00000585714 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000154262 ENST00000284425 3.228±0.00 0.298±0.00 0.885±0.00 1.476±0.00 2.085±0.70 3.537±1.16 2.440±0.35 10.901±10.49 5.558±1.61 4.225±2.31 0.850±0.00 1.962±1.08 0.111±0.00 0.581±0.33
ENST00000446604 4.114±0.00 0.841±0.00 N/A 0.531±0.00 1.894±0.00 3.433±0.00 N/A 0.680±0.00 7.150±0.00 N/A 0.630±0.00 N/A 0.322±0.07 0.626±0.16
ENST00000589482 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589803 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590311 N/A N/A 0.321±0.00 0.142±0.00 N/A 0.672±0.00 1.082±0.00 N/A 3.026±0.00 3.176±0.00 0.246±0.00 0.873±0.00 N/A N/A
ENST00000590645 N/A N/A 1.168±0.00 N/A N/A 3.518±0.00 2.487±0.00 N/A N/A 7.505±0.00 N/A 1.651±1.45 N/A 0.562±0.00
ENST00000592493 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000265331 ENST00000581569 N/A N/A N/A N/A 0.160±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000267361 ENST00000586611 0.405±0.00 N/A 0.895±0.00 0.155±0.06 0.403±0.27 0.637±0.57 0.658±0.29 0.976±0.00 1.185±1.12 0.125±0.00 1.990±1.98 0.133±0.04 0.031±0.00 0.025±0.01
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000041797 ENSMUST00000044850 N/A 0.669±0.13 N/A 0.724±0.00 N/A 0.613±0.13 N/A N/A 0.357±0.42 N/A N/A N/A 0.245±0.19 1.092±0.54
ENSMUST00000126499 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000044749 ENSMUST00000044003 1.567±0.58 0.225±0.07 N/A 0.066±0.02 1.883±0.37 0.071±0.04 0.513±0.33 0.293±0.13 12.590±8.12 0.503±0.08 0.262±0.09 1.696±0.60 0.024±0.02 0.254±0.14
ENSMUST00000150988 N/A 0.172±0.00 N/A N/A N/A 0.027±0.00 0.648±0.00 N/A N/A 0.689±0.00 N/A N/A 0.007±0.00 N/A

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